BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	408498 =	22 (0.130)	89 (0.520)	27/144	14.4	0.48	intergenic (+116/+32)	glnA1/dapA	glutamine synthetase/dihydrodipicolinate synthase
*	?	NC_014034	= 1320695	168 (0.710)	89 (0.520)	27/144	14.4	0.48	intergenic (+153/+32)	potI1/RCAP_rcc01247	polyamine ABC transporter permease PotI/membrane transport family protein
Rejected: Position hash score below cutoff.

Only 100 of 180 total aligned reads displayed.


TGCCCCCAGACCCCCGGGATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGCAAAGACGGGGG.....GC.....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCAAGCGCGGCCTTGGTCCCGTCGGTCAGTTCGGTCAG  >  NC_014034/408397‑408598


tGCCCCCAGACCCCCGGGATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACggggg.....g                                                                                                            >  1:3521186/1‑101 (MQ=255)


 gCCCCCAGACCCCCGGGATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGG.....Gc                                                                                                           >  2:1794406/1‑101 (MQ=255)


   ccccAGACCCCCGGGATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGG.....Gcag                                                                                                         <  1:1155364/101‑3 (MQ=255)


    cccAGACCCCCGGGATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGG.....Gcaga                                                                                                        <  1:2715690/101‑4 (MQ=255)


    cccAGACCCCCGGGATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGG.....Gcaga                                                                                                        <  1:1859462/101‑4 (MQ=255)


    cccAGAACCCCGGGATATTTGCGGCAGGATGAAGCCGATGTCCTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGG.....Gcaga                                                                                                        <  2:3677516/101‑4 (MQ=25)


    ccaagccccccGGGTTATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGG.....Gcaga                                                                                                        <  1:1264218/95‑4 (MQ=25)


     ccAGACCCCCGGGATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGG.....Gcagag                                                                                                       >  2:4497690/1‑97 (MQ=255)


     ccAGACCCCCGGGATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGG.....Gcagag                                                                                                       >  2:4132563/1‑97 (MQ=255)


     ccAGACCCCCGGGATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGG.....Gcagag                                                                                                       >  2:782892/1‑97 (MQ=255)


      cggcccccgGGGATTTTGGGGGAAAGTGGAAGCGAATGTCCTTCTTC.TGCCGCAAATTACCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGG.....Gcagagc                                                                                                      <  1:4084213/97‑6 (MQ=255)


       agcccccgGGGATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGG.....Gcagagcc                                                                                                     <  2:4039632/98‑7 (MQ=25)


       aGACCCCCGGGATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGG.....Gcagagcc                                                                                                     <  1:2927688/101‑7 (MQ=255)


        gACCCCCGGGATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGG.....Gcagagccc                                                                                                    >  2:4568544/1‑94 (MQ=25)


         aCCCCCGGGATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGG.....Gcagagcccc                                                                                                   >  1:1496102/1‑93 (MQ=25)


         aCCCCCGGGATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGG.....Gcagagcccc                                                                                                   >  2:487519/1‑93 (MQ=25)


          cccccGGGATATTTGCGGCAAGATGAAGCCGATGTTCTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGG.....Gcagagccccc                                                                                                  >  1:4172146/1‑92 (MQ=25)


                        gCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....C.CCCCGCACAGGTCGCCa                                                                                   >  1:3848788/1‑101 (MQ=21)


                        gCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....C.CCCCGCACAGGTCGCCa                                                                                   >  2:2159111/1‑101 (MQ=21)


                         cGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....C.CCCCGCACAGGTCGCCaa                                                                                  >  1:4227168/1‑101 (MQ=21)


                           gCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....C.CCCCGCACAGGTCGCCaaaa                                                                                >  1:3951279/1‑101 (MQ=21)


                             aaGATGAAGCCGATGTCCTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....C.CCCCGCACAGGTCGCCAAAAgg                                                                              >  2:4635319/1‑101 (MQ=21)


                             aaGATGAAGCCGATGTCCTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....C.CCCCGCACAGGTCGCCAAAAgg                                                                              <  1:4496811/101‑1 (MQ=21)


                              aGATGAAGCCGATGTCCTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....C.CCCCGCACAGGTCGCCAAAAGga                                                                             >  1:2223795/1‑101 (MQ=21)


                              aGATGAAGCCGATGTCCTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTCGCTGAAAGC.AAGACGGGGGGCAGAGC.....C.CCCCGCACAGGTCGCCAAAAGga                                                                             <  2:4448927/101‑1 (MQ=21)


                                aTGAAGCCGATGTCCTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....C.CCCCGCACAGGTCGCCAAAAGgacc                                                                           >  2:1816819/1‑101 (MQ=21)


                                 tgtaGCCGATGTGCTTCTTCTTACGGCAAA.TATCCGGGGGGGAGGCTTGCTGATAGC.AAGACGGGGGGCAGAGC.....C.CCCCGCACAGGTCGCCAAAAGgaccg                                                                          <  2:772020/98‑1 (MQ=255)


                                  gAAGCCGATGTCCTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....C.CCCCGCACAGGTCGCCAAAAGgaccga                                                                         >  2:1746629/1‑101 (MQ=21)


                                  gAAGCCGATGTCCTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....C.CCCCGCACAGGTCGCCAAAAGgaccga                                                                         >  2:3036764/1‑101 (MQ=21)


                                   aaGCCGATGTCCTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....C.CCCCGCACAGGTCGCCAAAAGgaccgac                                                                        <  2:258401/101‑1 (MQ=21)


                                   aaGCCGATGTCCTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....C.CCCCGCACAGGTCGCCAAAAGgaccgac                                                                        >  2:1201/1‑101 (MQ=21)


                                   aaGCCGATGTCCTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....C.CCCCGCACAGGCCGCCAAACGgaccgac                                                                        >  2:1888544/1‑101 (MQ=18)


                                    aGCCGATGTCCTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....C.CCCCGCACAGGTCGCCAAAAGgaccgacc                                                                       <  1:1537906/101‑1 (MQ=21)


                                     gCCGATGTCCTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....C.CCCCGCACAGGTCGCCAAAAGGACCGACCt                                                                      <  1:2749404/101‑1 (MQ=21)


                                     gCCGATGTCCTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....C.CCCCGCACAGGTCGCCAAAAGGACCGACCt                                                                      >  1:241500/1‑101 (MQ=21)


                                     gCCGATGTCCTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGG.....GCAGAGAC.CCCCGCACAGGTCGCCAAAAGgaccgacat                                                                      >  1:1521024/1‑99 (MQ=21)


                                      ccGATGTCCTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGG.....GCAGAG.CGCCCCGCACAGGTCGCCAAAAGGACCGACCTc                                                                     <  1:4190236/101‑1 (MQ=21)


                                       cGATGTCCTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCa                                                                    >  1:100880/1‑101 (MQ=21)


                                        gATGTCCTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAg                                                                   >  2:1385529/1‑101 (MQ=21)


                                         aTGTCCTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGa                                                                  >  2:2700486/1‑101 (MQ=21)


                                         aTGTCCTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGa                                                                  >  2:1563419/1‑101 (MQ=21)


                                         aTGTCCTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGa                                                                  <  2:1406402/101‑1 (MQ=21)


                                         aTGTCCTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGa                                                                  >  2:1393356/1‑101 (MQ=21)


                                            tCCTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCa                                                               <  1:4497985/101‑1 (MQ=21)


                                              cTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....C.CCCCGCCCAGGTCGCCAAAAGGACCGACCTCAGATCAGc                                                             >  1:980560/1‑101 (MQ=18)


                                               ttCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGcc                                                            >  2:3064905/1‑101 (MQ=21)


                                                tCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....C.CCCCGCCAAGGTCGCCAAAAGGACCGACCTCAGATCAGccc                                                           >  1:4010994/1‑101 (MQ=18)


                                                tCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGccc                                                           >  1:766393/1‑101 (MQ=21)


                                                 cATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCg                                                          >  1:4480274/1‑101 (MQ=21)


                                                  aTCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCgg                                                         >  1:2837731/1‑101 (MQ=21)


                                                    cTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCg                                                       >  2:2230083/1‑101 (MQ=25)


                                                    cTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCg                                                       >  2:1147166/1‑101 (MQ=25)


                                                      tGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....C.CCCCGCACAGGCCGCCAAAAGGACCGAACTCAGATCAGCCCGGCgtg                                                     >  2:523948/1‑101 (MQ=21)


                                                         cGCAAC.TAGCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCgacggg                                                  <  2:3470564/101‑6 (MQ=255)


                                                          gCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGc                                                 >  1:3106928/1‑101 (MQ=25)


                                                           cAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCa                                                >  1:3192378/1‑101 (MQ=25)


                                                           cAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCa                                                <  2:125412/101‑1 (MQ=255)


                                                            aaa.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCAt                                               >  1:4441865/1‑101 (MQ=37)


                                                            aaa.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCAt                                               >  1:2987627/1‑101 (MQ=37)


                                                            aaa.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCAt                                               >  2:3814545/1‑101 (MQ=37)


                                                             aa.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATc                                              >  1:1313730/1‑101 (MQ=255)


                                                             aa.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATc                                              >  2:1694189/1‑101 (MQ=255)


                                                              a.tatCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATcg                                             >  2:3408732/1‑101 (MQ=255)


                                                                tatCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....C.CCCCGCACAGGTCGCCAAAAGGACCNACCTCAGATCAGCCCGGCGTGTTGCATcgc                                            >  1:661998/1‑101 (MQ=255)


                                                                tatCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATcgc                                            >  2:3566215/1‑101 (MQ=255)


                                                                  tCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCgcgg                                          >  1:2634950/1‑101 (MQ=255)


                                                                   cccGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCgcggc                                         >  1:3322444/1‑101 (MQ=255)


                                                                   cccGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCgcggc                                         >  1:3364270/1‑101 (MQ=255)


                                                                   cccGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCgcggc                                         >  1:4309795/1‑101 (MQ=255)


                                                                     cGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGt                                       >  2:600178/1‑101 (MQ=255)


                                                                      ggggggAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTc                                      >  2:4220298/1‑101 (MQ=255)


                                                                      ggggggAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTc                                      >  2:3346193/1‑101 (MQ=255)


                                                                      ggggggAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTc                                      >  1:2616540/1‑101 (MQ=255)


                                                                      ggggggAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTc                                      >  2:3254146/1‑101 (MQ=255)


                                                                      ggggggAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTc                                      >  2:1134767/1‑101 (MQ=255)


                                                                      ggggggAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTc                                      >  2:2397515/1‑101 (MQ=255)


                                                                       gggggAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCa                                     >  1:2126809/1‑101 (MQ=255)


                                                                        ggggAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....C.CCCCGCACAGGTCGCCACAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCaa                                    >  2:563154/1‑101 (MQ=255)


                                                                        ggggAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCaa                                    >  2:2269536/1‑101 (MQ=255)


                                                                        ggggAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCaa                                    >  1:220476/1‑101 (MQ=255)


                                                                          ggAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCCTCGCGGCGTCAAgc                                  >  1:1019174/1‑101 (MQ=255)


                                                                           gAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCAAgcg                                 <  2:1930439/101‑1 (MQ=255)


                                                                           gAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCAAgcg                                 >  1:2392474/1‑101 (MQ=255)


                                                                            aGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCAAgcgc                                >  2:2613460/1‑101 (MQ=255)


                                                                             ggCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCAAGcgcg                               <  2:4337392/101‑1 (MQ=255)


                                                                               cTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCAAGCGCGGc                             >  1:51870/1‑101 (MQ=255)


                                                                                                 ggggggcagagC.....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCAAGCGCGGCCTTGGTCCCGTCGGTCa            >  1:3603698/11‑101 (MQ=255)


                                                                                                 ggggggcagagC.....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCAAGCGCGGCCTTGGTCCCGTCGGTCa            >  1:3168180/11‑101 (MQ=255)


                                                                                                 ggggggcagagC.....C.CCCCGAACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCAAGCGCGGCCTTGGTCCCGTCGGTCa            >  2:243763/11‑101 (MQ=255)


                                                                                                  gggggcagagC.....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCAAGCGCGGCCTTGGTCCCGTCGGTCAg           <  2:3139560/92‑1 (MQ=255)


                                                                                                   ggggcagagC.....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCAAGCGCGGCCTTGGTCCCGTCGGTCAGt          <  1:4270616/93‑1 (MQ=255)


                                                                                                    gggcagagC.....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCAAGCGCGGCCTTGGTCCCGTCGGTCAGtt         <  1:1938478/94‑1 (MQ=255)


                                                                                                    gggcagagC.....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCAAGCGCGGCCTTGGTCCCGTCGGTCAGtt         >  1:61748/8‑101 (MQ=255)


                                                                                                     ggcagagC.....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCAAGCGCGGCCTTGGTCCCGTCGGTCAGTTc        >  1:4527927/7‑101 (MQ=255)


                                                                                                      gcagagC.....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCAAGCGCGGCCTTGGTCCCGTCGGTCAGTTCg       >  2:4064743/6‑101 (MQ=255)


                                                                                                      gcagagC.....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCAAGCGCGGCCTTGGTCCCGTCGGTCAGTTCg       >  2:4049237/6‑101 (MQ=255)


                                                                                                       cagagC.....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCAAGCGCGGCCTTGGTCCCGTCGGTCAGTTCgg      >  1:575885/5‑101 (MQ=255)


                                                                                                        agagC.....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCAAGCGCGGCCTTGGTCCCGTCGGTCAGTTCGGt     >  2:1329257/4‑101 (MQ=255)


                                                                                                         gagC.....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCAAGCGCGGCCTTGGTCCCGTCGGTCAGTTCGGTc    <  2:845709/99‑1 (MQ=255)


                                                                                                           gC.....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCAAGCGCGGCCTTGGTCCCGTCGGTCAGTTCGGTCAg  >  2:4312715/1‑101 (MQ=255)


TGCCCCCAGACCCCCGGGATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGCAAAGACGGGGG.....GC.....C.CCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCAAGCGCGGCCTTGGTCCCGTCGGTCAGTTCGGTCAG  >  NC_014034/408397‑408598

Base quality scores:


ATCG

< 3 ≤


ATCG

< 20 ≤


ATCG

< 29 ≤


ATCG

< 34 ≤


ATCG

< 40 ≤


ATCG