BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	1395632 =	169 (1.060)	43 (0.270)	9/134	23.8	0.18	intergenic (+444/‑487)	RCAP_rcc01306/RCAP_rcc01307	Cas2 family CRISPR‑associated protein/hypothetical protein
*	?	NC_014034	= 1397532	229 (0.960)	43 (0.270)	9/134	23.8	0.18	coding (1414/1578 nt)	RCAP_rcc01307	hypothetical protein
Rejected: Position hash score below cutoff.

Only 100 of 238 total aligned reads displayed.


ATCTCGGTGCCGTCGCTCGTCCAGCCGGCCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGAT.T.GTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG..G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTG  >  NC_014034/1395532‑1395732


     ggTGCCGTCGCTCGTCCAGCCGGCCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGAT.T.GTCACTTTCGCGGGGCGAAGCGTCGc                                                                                                     <  1:363170/101‑1 (MQ=255)


     ggTGCCGTCGCTCGTCCAGCCGGCCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCAGAT.T.GTCACTTTCGCGGGGCGAAGCGTCGc                                                                                                     >  1:4232931/1‑101 (MQ=255)


         ccGTCGCTCGTCCAGCCGGCCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGAT.T.GTCACTTTCGCGGGGCGAAGCGTCGCTccc                                                                                                 <  1:1048444/101‑1 (MQ=255)


           gTCGCTCGTCCAGCCGGCCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGAT.T.GTCACTTTCGCGGGGCGAAGCGTCGCTccccc                                                                                               >  2:85671/1‑101 (MQ=255)


           gTCGCTCGTCCAGCCGGCCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGAT.T.GTCACTTTCGCGGGGCGAAGCGTCGCTccccc                                                                                               >  2:4413101/1‑101 (MQ=255)


            tCGCTCGTCCAGCCGGCCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGAT.T.GTCACTTTCGCGGGGCGAAGCGTCGCTcccccc                                                                                              <  1:3604688/101‑1 (MQ=255)


             cGCTCGTCCAGCCGGCCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGAT.T.GTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCcg                                                                                             >  1:4618104/1‑101 (MQ=255)


               cTCGTCCAGCCGGCCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGAT.T.GTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCcgcg                                                                                           <  1:1696867/101‑1 (MQ=255)


                    ccAGCCGGCCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGAT.T.GTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGc                                                                                      >  2:2294083/1‑101 (MQ=255)


                    ccAGCCGGCCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGAT.T.GTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGc                                                                                      >  2:3456793/1‑101 (MQ=255)


                      aGCCGGCCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGAT.T.GTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCgg                                                                                    >  2:4005187/1‑100 (MQ=255)


                      aGCCGGCCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGAT.T.GTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGt                                                                                    <  1:234842/101‑1 (MQ=255)


                        ccGGCCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGAT.T.GTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTgg                                                                                  >  2:374151/1‑101 (MQ=255)


                         cGGCCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGAT.T.GTCACTTTCGCGGGGCGAACCGTCGCTCCCCCCGCGGGGGCGTGGa                                                                                 >  2:745348/1‑101 (MQ=255)


                          ggCCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGAT.T.GTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGAt                                                                                <  1:708612/101‑1 (MQ=255)


                           gCCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGAT.T.GTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATc                                                                               <  2:3355301/101‑1 (MQ=255)


                           gCCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGAT.T.GTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATc                                                                               <  1:4520025/101‑1 (MQ=255)


                           gCCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGAT.T.GTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGGGGATc                                                                               >  2:4448886/1‑101 (MQ=255)


                            ccTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGAT.T.GTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCg                                                                              <  2:1158261/101‑1 (MQ=255)


                              tGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGAT.T.GTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGaa                                                                            >  2:1792624/1‑101 (MQ=255)


                                 tcgtcgCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGAT.T.GTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGaaaaa                                                                         <  1:800880/101‑3 (MQ=255)


                                  cgtcgCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGAT.T.GTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGTTCGAAACAt                                                                        >  1:4076265/1‑101 (MQ=255)


                                  cgtcgCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGAT.T.GTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAt                                                                        >  1:541231/1‑101 (MQ=255)


                                     cgCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGAT.T.GTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTg                                                                     >  2:2301745/1‑101 (MQ=255)


                                     cgCCCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGAT.T.GTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTg                                                                     <  1:1593354/101‑1 (MQ=255)


                                      gCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGAT.T.GTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGc                                                                    <  2:4620722/101‑1 (MQ=255)


                                      gCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGAT.T.GTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGc                                                                    <  2:4320174/101‑1 (MQ=255)


                                        tCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGAT.T.GTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCAt                                                                  >  1:3520281/1‑101 (MQ=255)


                                        tCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGAT.T.GTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCAt                                                                  >  2:2706700/1‑101 (MQ=255)


                                        tCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGAT.T.GTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCAt                                                                  >  2:3596065/1‑101 (MQ=255)


                                         ccccccGCGGGGGCGTGGATCGAAACCACCTTGCGGAT.T.GTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATg                                                                 >  2:1104328/1‑101 (MQ=255)


                                         ccccccGCGGGGGCGTGGATCGAAACCACCTTGCGGAT.T.GTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATg                                                                 >  2:2759318/1‑101 (MQ=255)


                                          cccccGCGGGGGCGTGGATCGAAACTACACCGGGGCTCTGGTCACGGT.TTGGGGCGGA..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCtttcaatg                                                               <  2:2867668/101‑8 (MQ=2)


                                          cccccGCGGGGGCGTGGATCGAAACCACCTTGCGGAT.T.GTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGt                                                                <  2:2895874/101‑1 (MQ=255)


                                          cccccGCGGGGGCGTGGATCGAAACCACCTTGCGGAT.T.GTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGt                                                                <  1:1019182/101‑1 (MQ=255)


                                            cccGCGGGGGCGTGGATCGAAACCCCCTTGCGGCT.T.GTCACTTCCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAg                                                              <  2:593523/101‑1 (MQ=255)


                                            cccGCGGGGGCGTGGATCGAAACCACCTTGCGGAT.T.GTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAg                                                              <  1:3178283/101‑1 (MQ=255)


                                              cgcgGGGGCGTGGATCGAAACCACCTTGCGGAT.T.GTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTc                                                            <  2:4278453/101‑1 (MQ=255)


                                                cgGGGGCGTGGATCGAAACCACCTTGCGGAT.T.GTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTcgg                                                          >  1:389315/1‑101 (MQ=255)


                                                 gggggCGTGGATCGAAACCACCTTGCGGAT.T.GTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTcggc                                                         <  2:3168764/101‑1 (MQ=255)


                                                 gggggCGTGGATCGAAACCACCTTGCGGAT.T.GTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTcggc                                                         <  1:2171506/101‑1 (MQ=255)


                                                 gggggCGTGGATCGAAACCACCTTGCGGAT.T.GTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTcggc                                                         >  2:3855214/1‑101 (MQ=255)


                                                   gggCGTGGATCGAAACCACCTTGCGGAT.T.GTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTcggcg..g                                                     >  1:2272101/1‑101 (MQ=255)


                                                    ggCGTGGATCGAAACCACCTTGCGGAT.T.GTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCg..g.g                                                   >  1:3366689/1‑101 (MQ=255)


                                                      cGTGGATCGAAACCACCTTGCGGAT.T.GTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG..T.GCa                                                 >  1:1151110/1‑101 (MQ=255)


                                                      cGTGGATCGAAACCACCTTGCGGAT.T.GTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG..G.GCa                                                 <  2:2249878/101‑1 (MQ=255)


                                                       gTGGATCGAAACCCCCTTGCGGAT.T.GTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG..G.GCAg                                                <  2:1988671/101‑1 (MQ=255)


                                                       gTGGATCGAAACCACCTTGCGGAT.T.GTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGAGGGGGGGTGGATCGAAACATCTTCATGTAGTCGGCG..G.GCAg                                                >  1:4563160/1‑101 (MQ=255)


                                                        tGGATCGAAACCACCTTGCGGAT.T.GTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG..G.GCAGt                                               >  1:2102832/1‑101 (MQ=255)


                                                        tGGATCGAAACCACCTTGCGGAT.T.GTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG..G.GCAGt                                               >  2:4046703/1‑101 (MQ=255)


                                                        tGGATCGAAACCACCTTGCGGAT.T.GTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG..G.GCAGt                                               <  1:787559/101‑1 (MQ=255)


                                                         ggATCGAAACCACCTTGCGGAT.T.GTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAGCATCTGCATGTAGTCCGCG..G.GCAGtt                                              >  1:1446933/1‑101 (MQ=255)


                                                         ggATCGAAACCACCTTGCGGAT.T.GTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG..G.GCAGtt                                              <  1:3536371/101‑1 (MQ=255)


                                                         ggATCGAAACCACCTTGCGGAT.T.GTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG..G.GCAGtt                                              <  1:1249426/101‑1 (MQ=255)


                                                         ggATCGAAACCACCTTGCGGAT.T.GTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCANGTAGTCGGCG..G.GCAGtt                                              >  2:1402289/1‑101 (MQ=255)


                                                          gATCGAAACCACCTTGCGGAT.T.GTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG..G.GCAGTTc                                             <  1:3398163/101‑1 (MQ=255)


                                                          gATCGAAACCACCTTGCGGAT.T.GTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG..G.GCAGTTc                                             >  2:2078314/1‑101 (MQ=255)


                                                           aTCGAAACCACCTTGCGGAT.T.GTCACTTTCGGGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG..G.GCAGTTCg                                            >  1:4130328/1‑101 (MQ=255)


                                                           aTCGAAACCACCTTGCGGAT.T.GTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG..G.GCAGTTCg                                            <  1:1759300/101‑1 (MQ=255)


                                                           aTCGAAACCACCTTGCGGAT.T.GTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG..G.GCAGTTCg                                            >  1:1378243/1‑101 (MQ=255)


                                                           aTCGAAACCACCTTGCGGAT.T.GTCACGTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG..G.GCAGTTCg                                            <  2:2991352/101‑1 (MQ=255)


                                                            tCGAAACCACCTTGCGGAT.T.GTCACTTTCGCGGGGCGAAGAGTCGCCCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGCAGACGGCG..G.GCAGTTCGa                                           >  2:1339793/1‑101 (MQ=38)


                                                              gAAACCACCTTGCGGAT.T.GTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG..G.GCAGTTCGA.Gc                                        <  1:2759516/101‑1 (MQ=255)


                                                              gAAACCACCTTGCGGAT.T.GTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG..G.GCAGTTCGA.Gc                                        >  1:2704004/1‑101 (MQ=255)


                                                              gAAACCACCTTGCGGAT.T.GTCACGTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG..G.GCAGTTCGA.Gc                                        <  2:655753/101‑1 (MQ=255)


                                                               aaaCCACCTTGCGGAT.T.GTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG..G.GCAGTTCGA.Gcc                                       >  2:3494459/1‑101 (MQ=255)


                                                               aaaCCACCTTGCGGAT.T.GTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG..G.GCAGTTCGA.Gcc                                       >  2:2451416/1‑101 (MQ=255)


                                                               aaaCCACCTTGCGGAT.T.GTCACTTTCGCGGGGCGAAGCGTCACTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG..G.GCAGTTCGA.Gcc                                       >  2:943537/1‑101 (MQ=255)


                                                                aaCCACCTTGCGGAT.T.GTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG..G.GCAGTTCGA.GCCg                                      >  2:4136741/1‑101 (MQ=255)


                                                                   caccTTGCGGAT.T.GTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG..G.GCAGTTCGA.GCCGCAg                                   <  1:4240796/101‑1 (MQ=255)


                                                                        tGCGGAT.T.GTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG..G.GCAGTTCGA.GCCGCAGTCGCt                              <  1:4413393/101‑1 (MQ=255)


                                                                         gCGGAT.T.GTCCCTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG..G.GCAGTTCGA.GCCGCAGTCGCTc                             <  1:93345/101‑1 (MQ=255)


                                                                          cGGAT.T.GTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG..G.GCAGTTCGA.GCCGCAGTCGCTcc                            >  2:1391325/1‑101 (MQ=255)


                                                                             gt.t.GTCACTTTCGCGGGGCGAAGCGGCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG..G.GCAGTTCGA.GCCGCAGTCGCTccccc                         <  2:874945/100‑1 (MQ=255)


                                                                              t.t.GTCACTTGCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG..G.GCAGTTCGA.GCCGCAGTCGCTcccccc                        <  2:4670937/101‑1 (MQ=255)


                                                                                t.GTCGCTTTCGGGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG..G.GCAGTTCGA.GCCGCAGTCGCTCCCCCcg                       <  1:1986970/101‑1 (MQ=255)


                                                                                    cACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG..G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCgg                    >  1:525253/1‑101 (MQ=255)


                                                                                       tttCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG..G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCggggg                 >  1:3239532/1‑101 (MQ=255)


                                                                                       tttCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG..G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCggggg                 >  2:3945711/1‑101 (MQ=255)


                                                                                        ttCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG..G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGc                <  1:2187180/101‑1 (MQ=255)


                                                                                        ttCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG..G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGc                >  2:3062841/1‑101 (MQ=255)


                                                                                          cgcgGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG..T.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGt              <  2:1151018/101‑1 (MQ=255)


                                                                                          cgcgGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG..G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCgg              >  2:2735204/1‑100 (MQ=255)


                                                                                          cgcgGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG..G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGt              >  1:2213866/1‑101 (MQ=255)


                                                                                          cgcgGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG..G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGt              >  1:2566944/1‑101 (MQ=255)


                                                                                           gcgGGGCGAAGCGTCCCCCCCCCCGCGGGGGCGTGGATCCAAACATCTGCATGTAGTCGGCG..G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTg             <  2:2365053/101‑1 (MQ=255)


                                                                                            cccgatcgaGCGTCGCCCCCCCCGCGGGGGCGGGGATCGAAACATCTGCATGTAGTCGGCG..G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTgg            <  1:4430061/93‑1 (MQ=38)


                                                                                             gtgccgctgCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGGCG..GCGAACACCGATACCGC.GTCGCTCCCCCCGCGGGGGCGTgg            <  2:370638/93‑1 (MQ=2)


                                                                                               ggCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG..G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATc         <  2:4217028/101‑1 (MQ=255)


                                                                                                gCGAAGCGTCGCCCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG..G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCg        <  1:986998/101‑1 (MQ=255)


                                                                                                 cGAAGCGTCGCCCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG..G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGa       <  1:374188/101‑1 (MQ=255)


                                                                                                  gctgCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGGCG..GCGAACACCGATACCGC.GTCGCTCCCCCCGCGGGGGCGTGGATCGa       >  2:573027/4‑101 (MQ=2)


                                                                                                  gAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG..G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGaa      >  1:1311469/1‑101 (MQ=255)


                                                                                                  gAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG..G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGaa      >  2:353174/1‑101 (MQ=255)


                                                                                                  gAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG..G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGaa      <  1:1719810/101‑1 (MQ=255)


                                                                                                  gAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG..G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGaa      >  1:3120485/1‑101 (MQ=255)


                                                                                                   ctgCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGGCG..GCGAACACCGATACCGC.GTCGCTCCCCCCGCGGGGGCGTGGATCGaa      <  1:4388192/99‑1 (MQ=2)


                                                                                                    tgCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGGCG..GCGAACACCGATACCGC.GTCGCTCCCCCCGCGGGGGCGTGGATCGaaa     >  2:2043302/2‑101 (MQ=2)


                                                                                                    aGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG..G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAc    <  1:280870/101‑1 (MQ=255)


                                                                                                     gCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGCTATGGCGGCAGTGTCA.GGTTTTCCA.GCGGC.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAAc    >  2:171963/1‑101 (MQ=2)


ATCTCGGTGCCGTCGCTCGTCCAGCCGGCCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGAT.T.GTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG..G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTG  >  NC_014034/1395532‑1395732

Base quality scores:


ATCG

< 3 ≤


ATCG

< 19 ≤


ATCG

< 27 ≤


ATCG

< 33 ≤


ATCG

< 40 ≤


ATCG