BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	1396706 =	171 (1.120)	90 (0.590)	35/128	9.1	0.41	coding (588/1578 nt)	RCAP_rcc01307	hypothetical protein
*	?	NC_014034	= 1397797	92 (0.390)	90 (0.590)	35/128	9.1	0.41	intergenic (+101/+1797)	RCAP_rcc01307/RCAP_rcc01309	hypothetical protein/IS66 family transposase
Rejected: Position hash score below cutoff.

Only 100 of 249 total aligned reads displayed.


TTTCGTCGCTTACGACGCCTATCTGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCGATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGT  >  NC_014034/1396607‑1396805


tttCGTCGCTTACGCCGCCTATCTGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGCGGCGATAACTCGCTCTTGCGATCCGTCAtcgt                                                                                                    >  1:314449/1‑101 (MQ=255)


tttCGTCGCTTACGACGCCTATCTGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCGATAACTCGCTCTTGCGATCCGTCAtcgt                                                                                                    <  1:295271/101‑1 (MQ=255)


 ttCGTCGCTTACGACGCCTATCTGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCGATAACTCGCTCTTGCGATCCGTCAtcgtc                                                                                                   <  1:1010502/101‑1 (MQ=255)


  tcgtcgCTTACGACGCCTATCTGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCGATAACTCGCTCTTGCGATCCGTCAtcgtcg                                                                                                  <  2:3393456/101‑1 (MQ=255)


  tcgtcgCTTACGACGCCTATCTGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCGATAACTCGCTCTTGCGATCCGTCAtcgtcg                                                                                                  >  1:3600507/1‑101 (MQ=255)


   cgtcgCTTACGACGCCTATCTGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCGATAACTCGCTCTTGCGATCCGTCATCGTCGc                                                                                                 >  1:1854853/1‑101 (MQ=255)


     tcgCTTACGACGCCTATCTGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCGATAACTCGCTCTTGCGATCCGTCATCGTCGCTc                                                                                               <  2:3498988/101‑1 (MQ=255)


         ttACGACGCCTATCTGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCGATAACTCGCTCTTGCGATCCGTCATCGTCGCTccccc                                                                                           >  1:3716804/1‑101 (MQ=255)


          tACGACGCCTATCTGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCGATAACTCGCTCTTGCGATCCGTCATCGTCGCTcccccc                                                                                          <  2:4005318/101‑1 (MQ=255)


          tACGACGCCTATCTGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCGATAACTCGCTCTTGCGATCCGTCATCGTCGCTcccccc                                                                                          <  2:2047761/101‑1 (MQ=255)


            tgacgCCTATCTGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGGTCGAAACCATGCGGCGATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCcgc                                                                                        >  1:1571168/2‑101 (MQ=255)


             gacgCCTATCTGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCGATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCcgcg                                                                                       <  1:762388/101‑1 (MQ=255)


                gCCTATCTGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCGATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCgggg                                                                                    >  1:398187/1‑101 (MQ=255)


                  cTATCTGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCGATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGc                                                                                  >  1:1220407/1‑101 (MQ=255)


                  cTATCTGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCGATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCCCGGGGGc                                                                                  >  1:44076/1‑101 (MQ=255)


                      cTGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAACCCATGCGGCGATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTgg                                                                              <  1:1923930/101‑1 (MQ=255)


                      cTGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAACCCATGCGGCGATAACCCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTgg                                                                              <  2:314417/101‑1 (MQ=255)


                      cTGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCGATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTgg                                                                              <  1:347460/101‑1 (MQ=255)


                        gATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCTATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGAt                                                                            >  1:1688894/1‑101 (MQ=255)


                          tttCGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCGATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCg                                                                          <  1:2437410/101‑1 (MQ=255)


                           ttCGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCGATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGGGGATCGa                                                                         >  1:3184744/1‑101 (MQ=255)


                             cGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCGATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGaaa                                                                       >  2:1335196/1‑101 (MQ=255)


                              gggTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCGATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAc                                                                      <  2:2794701/101‑1 (MQ=255)


                               ggTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCGATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAcc                                                                     <  1:935923/101‑1 (MQ=255)


                               ggTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCGATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAcc                                                                     <  2:3245393/101‑1 (MQ=255)


                                 tCGCTCCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCGATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCt                                                                   >  2:2904934/1‑101 (MQ=255)


                                 tCGCTCCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCGATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCt                                                                   >  2:236032/1‑101 (MQ=255)


                                  cGCTCCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCGATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTg                                                                  <  1:2474891/101‑1 (MQ=255)


                                  cGCTCCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCGATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTg                                                                  >  1:3393993/1‑101 (MQ=255)


                                   gCTCCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCGATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGt                                                                 <  2:4125409/101‑1 (MQ=255)


                                    cTCCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCGATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTc                                                                >  2:2492935/1‑101 (MQ=255)


                                     tCCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCGATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTcc                                                               >  1:4511693/1‑101 (MQ=255)


                                      ccccccGCGGGGGCGTGGATCGAAACCATGCGGCGATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTccc                                                              >  1:436335/1‑101 (MQ=255)


                                       cccccGCGGGGGCGTGGATCGAAACCATGCGGCGATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCt                                                             <  1:3733090/101‑1 (MQ=255)


                                         cccGCGGGGGCGTGGATCGAAACCATGCGGCGATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCa                                                           <  1:2725151/101‑1 (MQ=255)


                                          ccGCGGGGGCGTGGATCGAAACCATGCGGCGATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCat                                                          <  2:1559962/101‑1 (MQ=255)


                                           cgcgGGGGCGTGGATCGAAACCATGCGGCGATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCata                                                         >  2:330907/1‑101 (MQ=255)


                                            gcgGGGGCGTGGATCGAAACCATGCGGCGATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCatat                                                        <  2:1069376/101‑1 (MQ=255)


                                            gcgGGGGCGTGGATCGAAACCATGCGGCGATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCatat                                                        <  2:4637706/101‑1 (MQ=255)


                                             cgGGGGCGTGGATCGAAACCATGCGGCGATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCTTGGATCGAAACCCTGTCCCTCATAtg                                                       >  2:748806/1‑101 (MQ=255)


                                             cgGGGGCGTGGATCGAAACCATGCGGCGATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTTTCACTTATAtg                                                       >  2:1526555/1‑101 (MQ=255)


                                             cgGGGGCGTGGATCGAAACCATGCGGCGATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATAtg                                                       <  2:436298/101‑1 (MQ=255)


                                              gggggCGTGGATCGAAACCATGCGGCGATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATAtgc                                                      >  1:849473/1‑101 (MQ=255)


                                              gggggCGTGGATCGAAACCATGCGGCGATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATAtgc                                                      >  1:3209529/1‑101 (MQ=255)


                                               ggggCGTGGATCGAAACCATGCGGCGATAACTCGCTCATGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATAtgct                                                     <  1:3252343/101‑1 (MQ=255)


                                                  gCGTGGATCGAAACCATGCGGCGATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGcc                                                  <  1:1713202/101‑1 (MQ=255)


                                                  gCGTGGATCGAAACCATGCGGCGATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGcc                                                  <  1:3680817/101‑1 (MQ=255)


                                                  gCGTGGATCGAAACCATGCGGCGATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGcc                                                  <  2:2409745/101‑1 (MQ=255)


                                                  gCGTGGATCGAAACCATGCGGCGATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGcc                                                  <  2:259150/101‑1 (MQ=255)


                                                   cGTGGATCGAAACCATGCGGCGATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCa                                                 >  1:1443083/1‑101 (MQ=255)


                                                    gTGGATCGAAACCATGCGGCGATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCAc                                                <  1:2232220/101‑1 (MQ=255)


                                                       gATCGAAACCATGCGGCGATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGAt                                             <  2:3680488/101‑1 (MQ=255)


                                                       gATCGAAACCATGCGGCGATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGAt                                             <  1:2085855/101‑1 (MQ=255)


                                                       gATCGAAACCATGCGGCGATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGAt                                             >  1:4050084/1‑101 (MQ=255)


                                                       gATCGAAACCATGCGGCGATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGAt                                             >  2:284561/1‑101 (MQ=255)


                                                        aTCGAAACCATGCGGCGATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATg                                            >  2:899086/1‑101 (MQ=255)


                                                        aTCGAAACCATGCGGCGATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATg                                            <  1:863825/101‑1 (MQ=255)


                                                        aTCGAAACCATGCGGCGATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATg                                            >  1:2557078/1‑101 (MQ=255)


                                                         tCGAAACCATGCGGCGATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGc                                           <  2:3138580/101‑1 (MQ=255)


                                                          cGAAACCATGCGGCGATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGcc                                          >  1:1301081/1‑101 (MQ=255)


                                                           gAAACCATGCGGCGATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGccc                                         <  2:1425428/101‑1 (MQ=255)


                                                            aaaCCATGCGGCGATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCt                                        >  1:3297059/1‑101 (MQ=255)


                                                             aaCCATGCGGCGATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCtt                                       >  2:3775104/1‑101 (MQ=255)


                                                               ccATGCGGCGATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGa                                     <  1:573422/101‑1 (MQ=255)


                                                               ccATGCGGCGATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGa                                     >  2:863745/1‑101 (MQ=255)


                                                               ccATGCGGCGATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGa                                     <  1:2690118/101‑1 (MQ=255)


                                                                cATGCGGCGATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAg                                    <  1:4105842/101‑1 (MQ=255)


                                                                 aTGCGGCGATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGt                                   >  2:2258674/1‑101 (MQ=255)


                                                                  tGCGGCGATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTc                                  <  1:236056/101‑1 (MQ=255)


                                                                  tGCGGCGATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTc                                  <  2:4285977/101‑1 (MQ=255)


                                                                    cggcgATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGc                                <  1:4435823/101‑1 (MQ=255)


                                                                    cggcgATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGc                                >  1:133361/1‑101 (MQ=255)


                                                                        gATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTccc                            <  1:2065150/101‑1 (MQ=255)


                                                                          tAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTccccc                          <  1:117802/101‑1 (MQ=255)


                                                                           aaCTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTcccccc                         <  2:3731361/101‑1 (MQ=255)


                                                                           aaCTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTcccccc                         <  2:1854727/101‑1 (MQ=255)


                                                                           aaCTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTcccccc                         <  1:480710/101‑1 (MQ=255)


                                                                            aCTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTccccccc                        >  2:1482236/1‑100 (MQ=255)


                                                                             cTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCcgc                       >  1:4593668/1‑101 (MQ=255)


                                                                               cGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCgg                     <  2:4312989/101‑1 (MQ=255)


                                                                               cGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCgg                     >  1:1532162/1‑101 (MQ=255)


                                                                                 cttttGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCgggg                   <  2:3936310/98‑1 (MQ=255)


                                                                                 ctctTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGGTCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCgggg                   >  1:2610766/1‑101 (MQ=255)


                                                                                 ctctTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCgggg                   <  1:3856771/101‑1 (MQ=255)


                                                                                 ctctTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCgggg                   >  1:421662/1‑101 (MQ=255)


                                                                                     tGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGt               <  2:4568627/101‑1 (MQ=255)


                                                                                     tGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGt               >  2:763379/1‑101 (MQ=255)


                                                                                     tGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTCGAGTCGCTCCCCCCGCGGGGGCGt               <  1:3031606/101‑1 (MQ=255)


                                                                                      gCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTg              <  1:3444081/101‑1 (MQ=255)


                                                                                       cGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTgg             <  2:3616055/101‑1 (MQ=255)


                                                                                        gATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGa            >  1:1483869/1‑101 (MQ=255)


                                                                                         gtCCGGCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGAt           <  2:1260181/100‑1 (MQ=255)


                                                                                         aTCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGAt           >  1:3080736/1‑101 (MQ=255)


                                                                                         aTCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGAt           >  1:4658024/1‑101 (MQ=255)


                                                                                            cGTCATCGTCGCCCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGa        <  2:1603316/101‑1 (MQ=255)


                                                                                              ccATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAACCCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGaaa      <  2:300604/100‑1 (MQ=255)


                                                                                               cATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCGGGGGGGGCGTGGATCGAAAc     >  2:1178621/1‑101 (MQ=255)


                                                                                                 ccgtcgCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCg   <  1:2910152/100‑1 (MQ=255)


                                                                                                  cgtcgCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCgt  >  1:66269/1‑101 (MQ=255)


                                                                                                  cgtcgCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCgt  <  2:2141558/101‑1 (MQ=255)


TTTCGTCGCTTACGACGCCTATCTGATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCGATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGT  >  NC_014034/1396607‑1396805

Base quality scores:


ATCG

< 3 ≤


ATCG

< 18 ≤


ATCG

< 27 ≤


ATCG

< 33 ≤


ATCG

< 40 ≤


ATCG