BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	1396902 =	152 (0.970)	46 (0.290)	6/132	26.2	0.24	coding (784/1578 nt)	RCAP_rcc01307	hypothetical protein
*	?	NC_014034	= 1397934	141 (0.590)	46 (0.290)	6/132	26.2	0.24	intergenic (+238/+1660)	RCAP_rcc01307/RCAP_rcc01309	hypothetical protein/IS66 family transposase
Rejected: Position hash score below cutoff.

Only 100 of 239 total aligned reads displayed.


CCGTGTGGATGATCATGCAGCGCGGACGGCTTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCGGC.CGCA.TCGGCTTCCGCCTGCGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAT  >  NC_014034/1396802‑1397002


 cGTGTGGATGATCATGCAGCGCGGACGGCTTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACg                                                                                                          >  2:2445451/1‑101 (MQ=255)


    gtgGATGATCATGCAGCGCGGACGGCTTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCg                                                                                                       <  2:3210238/101‑1 (MQ=255)


    gtgGATGATCATGCAGCGCGGACGGCTTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCg                                                                                                       >  2:3017081/1‑101 (MQ=255)


         tgatCATGCAGCGCGGACGGCTTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTccc                                                                                                  <  1:4628105/101‑1 (MQ=255)


          gatCATGCAGCGCGGACGGCTTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTcccc                                                                                                 >  2:2148416/1‑101 (MQ=255)


           atCATGCAGCGCGGACGGCTTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTccccc                                                                                                >  2:338001/1‑101 (MQ=255)


            tCATGCAGCGCGGACGGCTTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTcccccc                                                                                               <  2:2304326/101‑1 (MQ=255)


            tCATGCAGCGCGGACGGCTTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTcccccc                                                                                               <  2:1053621/101‑1 (MQ=255)


            tCATGCAGCGCGGACGGCTTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTcccccc                                                                                               <  2:3086578/101‑1 (MQ=255)


            tCATGCAGCGCGGACGGCTTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTcccccc                                                                                               <  1:2566354/101‑1 (MQ=255)


             cATGCAGCGCGGACGGCTTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTccccccc                                                                                              <  1:3677309/101‑2 (MQ=255)


               tGCAGCGCGGACGGCTTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCcgcg                                                                                            >  2:1006468/1‑101 (MQ=255)


                gCAGCGCGGACGGCTTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCgg                                                                                           >  2:3430531/1‑101 (MQ=255)


                gCAGCGCGGACGGCTTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCgg                                                                                           <  2:2247592/101‑1 (MQ=255)


                 cAGCGCGGACGGCTCGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCggg                                                                                          >  2:2620381/1‑101 (MQ=255)


                  aGCGCGGACGGCTTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCgggg                                                                                         <  2:4593369/101‑1 (MQ=255)


                     gcgGACGGCTTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCg                                                                                      <  1:1993368/101‑1 (MQ=255)


                       gggctgCTTGGCCCGCTCCCCCCGCGGGGGCGTGGATCGAACCCGGTCCAGTGATAGACCGCCCGGAGCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTg                                                                                    <  2:3616189/96‑1 (MQ=37)


                       ggACGGCTTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTg                                                                                    <  1:1290197/101‑1 (MQ=255)


                          cGGCTTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGAt                                                                                 >  2:2175306/1‑101 (MQ=255)


                               tGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGaaa                                                                            >  2:2835068/1‑101 (MQ=255)


                               tGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGaaa                                                                            >  2:2988548/1‑101 (MQ=255)


                                gggTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAc                                                                           <  1:1526664/101‑1 (MQ=255)


                                   ttgCTCCCGCCGCGGGTGGCTTGAACGCAACTGCTCAAGAGATAGGCCGCGCCTGCCTCCTTTGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.Gc                                                                       <  2:731601/99‑1 (MQ=9)


                                    cGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.Gcc                                                                      <  2:4002012/101‑1 (MQ=255)


                                    cGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.Gcc                                                                      >  2:1222517/1‑101 (MQ=255)


                                     gCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCt                                                                     >  1:671460/1‑101 (MQ=255)


                                     gCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCt                                                                     >  2:1872038/1‑101 (MQ=255)


                                     gCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCt                                                                     >  1:829402/1‑101 (MQ=255)


                                       tCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.gc                                                                  >  2:1988901/1‑101 (MQ=255)


                                        ccccccGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.gcg                                                                 <  1:2673570/101‑1 (MQ=255)


                                         cccccGCGGGGGCGTGGATCGAAACCGGTCGAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.gcgc                                                                >  1:4146222/1‑101 (MQ=255)


                                         cccccGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.gcgc                                                                >  1:2699868/1‑101 (MQ=255)


                                          ccccGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.Gcgcg                                                               <  1:1006551/101‑1 (MQ=255)


                                          ccccGCGGGGGCGTGGATCGAAACCGGCCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.Gcgcg                                                               >  1:563834/1‑101 (MQ=255)


                                             cgcgGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCGGc.c                                                           <  1:2921224/101‑1 (MQ=255)


                                                gggggCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCGGC.CGCa                                                        >  1:1083970/1‑101 (MQ=255)


                                                 ggggCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCGGC.CGCA.t                                                      >  1:2483337/1‑101 (MQ=255)


                                                 ggggCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCGGC.CGCA.t                                                      <  1:2063459/101‑1 (MQ=255)


                                                 ggggCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCGGC.CGCA.t                                                      <  1:1917167/101‑1 (MQ=255)


                                                  gggGGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCGGC.CGCA.Tc                                                     <  1:2155617/101‑1 (MQ=255)


                                                   ggCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCGGC.CGCA.TCg                                                    >  2:4602678/1‑101 (MQ=255)


                                                   ggCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCGGC.CGCA.TCg                                                    >  1:3775151/1‑101 (MQ=255)


                                                     cGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCGGC.CGCA.TCGGc                                                  >  2:4062620/1‑101 (MQ=255)


                                                     cGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAAA.GCCT.GCGCGGC.CGCA.TCGGc                                                  >  2:1903913/1‑101 (MQ=255)


                                                      gTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGGGGATCGAAACA.GCCT.GCGCGGG.CGCA.TCGGCt                                                 >  2:1619760/1‑101 (MQ=255)


                                                         gATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCGGC.CGCA.TCGGCTTcc                                              <  2:2558992/101‑1 (MQ=255)


                                                         gATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCGGC.CGCA.TCGGCTTcc                                              <  2:917483/101‑1 (MQ=255)


                                                          aTCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCGGC.CGCA.TCGGCTTCCg                                             >  2:3148728/1‑101 (MQ=255)


                                                          aTCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCGGC.CGCA.TCGGCTTCCg                                             <  1:4016466/101‑1 (MQ=255)


                                                            cGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCGGC.CGCA.TCGGCTTCCGcc                                           >  1:2985986/1‑101 (MQ=255)


                                                             gAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCGGC.CGCA.TCGGCTTCCGCCt                                          <  1:1094541/101‑1 (MQ=255)


                                                             gAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCGGC.CGCA.TCGGCTTCCGCCt                                          >  2:393616/1‑101 (MQ=255)


                                                              aacccGGTCCAAAGATAGGCCGCTCGGACCTCCTCAGACGTCCCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCGGC.CGCA.TCGGCTTCCGCCTg                                         <  1:1178713/98‑1 (MQ=38)


                                                              aaaCCGGTCCAGAGATAGCCCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCGGC.CGCA.TCGGCTTCCGCCTg                                         <  1:955847/101‑1 (MQ=255)


                                                              aaaCCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCGGC.CGCA.TCGGCTTCCGCCTg                                         <  1:187150/101‑1 (MQ=255)


                                                              aaaCCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCGGC.CGCA.TCGGCTTCCGCCTg                                         >  1:1712842/1‑101 (MQ=255)


                                                               aaCCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCGGC.CGCA.TCGGCTTCCGCCTGc                                        <  2:1532053/101‑1 (MQ=255)


                                                               aaCCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCGGC.CGCA.TCGGCTTCCGCCTGc                                        <  2:2692899/101‑1 (MQ=255)


                                                                  cGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCGGC.CGCA.TCGGCTTCCGCCTGCggg                                     >  2:1744725/1‑99 (MQ=255)


                                                                  cGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCGGC.CGCA.TCGGCTTCCGCCTGCGTg                                     <  2:614307/101‑1 (MQ=255)


                                                                   ggTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCGGC.CGCA.TCGGCTTCCGCCTGCGCg.g                                   >  1:3224278/1‑101 (MQ=255)


                                                                     tCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCGGC.CGCA.TCGGCTTCCGCCTGCGTG.GTc                                 >  2:2393811/1‑101 (MQ=255)


                                                                     tCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCGGC.CGCA.TCGGCTTCCGCCTGCGTG.GTc                                 <  1:4353836/101‑1 (MQ=255)


                                                                     tCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCGGC.CGCA.TCGGCTTCCGCCTGCGTG.GTc                                 <  1:860655/101‑1 (MQ=255)


                                                                      ccAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCGGC.CGCA.TCGGCTTCCGCCTGCGTG.GTCg                                <  1:3079118/101‑1 (MQ=255)


                                                                         gagaTAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCGGC.CGCA.TCGGCTTCCGCCTGCGTG.GTCGCTc                             <  1:527195/101‑1 (MQ=255)


                                                                         gagaTAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCGGC.CGCA.TCGGCTTCCGCCTGCGGG.GTCGcac                             >  1:3286542/1‑99 (MQ=255)


                                                                           gaTAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCGGC.CGCA.TCGGCTTCCGCCTGCGTG.GTCGCTccc                           >  2:4221109/1‑101 (MQ=255)


                                                                            aTAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCGGC.CGCA.TCGGCTTCCGCCTGCGTG.GTCGCTcccc                          <  2:4145934/101‑1 (MQ=255)


                                                                              aGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCGGC.CGCA.TCGGCTTCCGCCTGCGTG.GTCGCTcccccc                        <  2:1248073/101‑1 (MQ=255)


                                                                              aGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCGGC.CGCA.TCGGCTTCCGCCTGCGTG.GTCGCCcccccc                        >  2:210502/1‑101 (MQ=255)


                                                                               gtccGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCGGC.CGCA.TCGGCTTCCGCCTGCGTG.GTCGCTCACCCcg                       <  2:944517/99‑1 (MQ=255)


                                                                                 ccGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCGGC.CGCA.TCGGCTTCCGCCTGCGTG.GTCGCCCCCCCcgcg                     >  1:351994/1‑101 (MQ=255)


                                                                                  cgcgcgGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCGGC.CGCA.TCGGCTTCCGCCTGCGTG.GTCGCTCCCCCCGCgg                    <  2:1442988/101‑1 (MQ=255)


                                                                                   gcgcgGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCGGC.CGCA.TCGGCTTCCGCCTGCGTG.GTCGCTCCCCCCGCggg                   >  1:1477450/1‑101 (MQ=255)


                                                                                     gcgGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCGGC.CGCA.TCGGCTTCCGCCTGCGTG.GTCGCTCCCCCCGCggggg                 <  1:2271012/101‑1 (MQ=255)


                                                                                     gcgGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCGGC.CGCA.TCGGCTTCCGCCTGCGTG.GTCGCTCCCCCCGCggggg                 >  2:1950336/1‑101 (MQ=255)


                                                                                      cgGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCGGC.CGCA.TCGGCTTCCGCCTGCGTG.GTCGCTCCCCCCGCGGGGGc                >  1:375397/1‑101 (MQ=255)


                                                                                        gACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCGGC.CGCA.TCGGCTTCCGCCTGCGTG.GTCGCTCCCCCCGCGGGGGCGt              >  2:2728398/1‑101 (MQ=255)


                                                                                          cctcctCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCGGC.CGCA.TCGGCTTCCGCCTGCGTG.GTCGCTCCCCCCGCGGGGGCGTgg            <  2:841411/101‑1 (MQ=255)


                                                                                           ctcctcAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCGGC.CGCA.TCGGCTTCCGCCTGCGTG.GTCGCTCCCCCCGCGGGGGCGTGGa           <  2:4139049/101‑1 (MQ=255)


                                                                                            tcctcAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCGGC.CGCA.TCGGCTTCCGCCTGCGTG.GTCGCTCCCCCCGCGGGGGCGTGGAt          >  1:2244726/1‑101 (MQ=255)


                                                                                            tcctcAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCGGC.CGCA.TCGGCTTCCGCCTGCGTG.GTCGCTCCCCCCGCGGGGGCGTGGAt          <  1:2113141/101‑1 (MQ=255)


                                                                                             gcggttgcGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGCTATGGCGGC.AGTG.TCAGGTT.TTCCAGCGGC.GTCGCTCCCCCCGCGGGGGCGTgggt          >  2:4362149/8‑99 (MQ=0)


                                                                                             gcggttgcGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGCTATGGCGGC.AGTG.TCAGGTT.TTCCAGCGGC.GTCGCTCCCCCCGCGGGGGCGTGGAt          <  2:1370454/94‑1 (MQ=2)


                                                                                             gcggttgcGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGCTATGGCGGC.AGTG.TCAGGTT.TTCCAGCGGC.GTCGCTCCCCCCGCGGGGGCGTGGAt          <  2:1135072/94‑1 (MQ=2)


                                                                                             gcggttgcGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGCTATGGCGGC.AGTG.TCAGGTT.TTCCAGCGGC.GTCGCTCCCCCCGCGGGGGCGTGGAt          <  2:826403/94‑1 (MQ=2)


                                                                                             acccgcccGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GCGT.GCGCGCCATGAATTCATCGAGCGCCATCGAGCGTCGCTCCCCCCGCGGGGGCGTgg            <  2:2478642/94‑1 (MQ=0)


                                                                                              ctcAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCGGC.CGCA.TCGGCTTCCGCCTGCGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCg        <  1:2797965/101‑1 (MQ=255)


                                                                                              cggttgcGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGCTATGGCGGC.AGTG.TCAGGTT.TTCCAGCGGC.GTCGCTCCCCCCGCGGGGGCGTGGATc         <  1:2026338/95‑1 (MQ=2)


                                                                                                gttgcGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGCTATGGCGGC.AGTG.TCAGGTT.TTCCAGCGGC.GTCGCTCCCCCCGCGGGGGCGTGGATCGa       <  1:3430769/97‑1 (MQ=2)


                                                                                                gttgcGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGCTATGGCGGC.AGTG.TCAGGTT.TTCCAGCGGC.GTCGCTCCCCCCGCGGGGGCGTGGATCGa       >  2:1265337/5‑101 (MQ=2)


                                                                                                 gcccGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GCGT.GCGCGCCATGAATTCATCGAGCGCCATCGAGCGTCGCTCCCCCCGCGGGGGCGTGGATCg        <  1:163732/98‑1 (MQ=2)


                                                                                                 ccccGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GCGT.GCGCGCCATGAATTCATCGAGCGCCATCGAGCGTCGCTCCCCCCGCGGGGGCGTGGATCg        <  1:2345228/98‑1 (MQ=2)


                                                                                                 aggcGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCGGC.CGCA.TCGGCTTCCGCCTGCGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGaaa     <  1:1347308/98‑1 (MQ=255)


                                                                                                 aGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCGGC.CGCA.TCGGCTTCCGCCTGCGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGaaa     <  2:4192446/101‑1 (MQ=255)


                                                                                                 aGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCGGC.CGCA.TCGGCTTCCGCCTGCGTG.GTCGCTCCCCCCGCGGGGGCGGGGATAGatc     >  1:1879412/1‑99 (MQ=255)


                                                                                                  tgcGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGCTATGGCGGC.AGTG.TCAGGTT.TTCCAGCGGC.GTCGCTCCCCCCGCGGGGGGGTGGATCGaaa     >  2:1783993/3‑101 (MQ=2)


                                                                                                    cGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGCTATGGCGGC.AGTG.TCAGGTT.TTCCAGCGGC.GTCGCTCCCCCCGCGGGGGCGGGGATCGAAAcc   >  2:472197/1‑100 (MQ=2)


CCGTGTGGATGATCATGCAGCGCGGACGGCTTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.GCCT.GCGCGGC.CGCA.TCGGCTTCCGCCTGCGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAT  >  NC_014034/1396802‑1397002

Base quality scores:


ATCG

< 3 ≤


ATCG

< 18 ≤


ATCG

< 25 ≤


ATCG

< 33 ≤


ATCG

< 39 ≤


ATCG