BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	1640006 =	58 (0.270)	57 (0.260)	9/184	30.1	0.57	intergenic (+86/‑59)	mccB/mccA	methylcrotonoyl‑CoA carboxylase subunit beta/methylcrotonoyl‑CoA carboxylase subunit alpha
*	?	NC_014034	2070642 =	28 (0.120)	57 (0.260)	9/184	30.1	0.57	intergenic (+57/+115)	dcd/guaB	deoxycytidine triphosphate deaminase/inosine‑5'‑monophosphate dehydrogenase
Rejected: Position hash score below cutoff.

Only 100 of 116 total aligned reads displayed.


TCTTCCGGATGTGACTTTCGATGCCTCCGGCGGGGATATTTGGGGC.AAGATGAAACCCATCCCTTT.CATC.TT.GCCCCAAATAT.CCCGGGGGGCC.C..GGGG.....G.....C.G.....C....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCG  >  NC_014034/1639907‑1640104


tCTTCCGGATGTGACTTTCGATGCCTCCGGCGGGGGGATTTTGGGC.AAAAGAAAAAACACACCTTT.TATC.TT.TCCCCCAATAT.CCCCGGGTGCC.C..gggg.....gg                                                                                                                  >  2:1046555/1‑100 (MQ=255)


tCTTCCGGATGTGACTTTCGATGCCTCCGGCGGGGATATTTGGGGC.AAGATGAAACCCATCCCTTT.CATC.TT.GCCCCGAATAT.CCCGGGGGGCC.C..gggg.....gg                                                                                                                  >  2:1355834/1‑100 (MQ=255)


 cTTCCGGATGTGACTTTCGATGCCTCCGGCGGGGATATTTGGGGC.AAGATGAAACCCATCCCTTT.CATC.TT.GCCCCAAATAT.CCCGGGGGGCC.C..gggg.....ggc                                                                                                                 <  1:1949940/101‑3 (MQ=255)


  ttCCGGATGTGACTTTCGATGCCTCCGGCGGGGATATTTGGGGC.AAGATGAAACCCATCCCTTT.CATC.TT.GCCCCAAATAT.CCCGGGGGGCC.C..gggg.....ggca                                                                                                                <  2:2133467/101‑4 (MQ=255)


  gatctgATGTGACTTTCGATGCCTCCGGCGGGGATATTTGGGGC.AAGATGAAACCCATCCCTTT.CATC.TT.GCCCCAAATAT.CCCGGGGGGCC.C..gggg.....ggca                                                                                                                <  2:2771009/96‑4 (MQ=255)


   tCCGGATGTGACTTTCGATGCCTCCGGCGGGGATATTTGGGGC.AAGATGAAACCCATCCCTTT.CATC.TT.GCCCCAAATAT.CCCGGGGGGCC.C..gggg.....ggcag                                                                                                               <  2:369204/101‑5 (MQ=255)


    ccGGATGTGACTTTCGATGCCTCCGGCGGGGATATTTGGGGC.AAGATGAAACCCATCCCTTT.CATC.TT.GCCCCAAATAT.CCCGGGGGGCC.C..gggg.....ggcagc                                                                                                              <  1:1983164/101‑6 (MQ=255)


     cGGATGTGACTTTCGATGCCTCCGGCGGGGAGATTTGGGGG.GAAACAAAACCCAACCCTTT.CATC.TT.GCCCCAAAAAA.TCCCCGGGGCC.C..ggcg.....gggggag                                                                                                             >  1:2877610/1‑95 (MQ=255)


      ggATGTGACTTTCGATGCCTCCGGCGGGGGGATTTTGGGG.AAGATGAAAACCATCCCCTT.CATCTTT.CCCCCAAAATT.CCCGGGGGGCC.C..GGGG.....g.....c.ggcgc                                                                                                       >  1:2564080/1‑97 (MQ=255)


      ggATGTGACTTTCGATGCCTCCGGCGGGGGGAATTTGGGG.AAGAAGAAAACCATCCCCTT.CATC.TTGGCCCCAATAAT.CCGGGGGGTCC.C..gggg.....ggagcgg                                                                                                             >  2:484986/1‑95 (MQ=255)


       gATGTGACTTTCGATGCCTCCGGCGGGGGTATTTTGGGC.AAGATGAAACCCATCCCTTT.CATC.TT.TCCCCCAATAT.CCCGGGGGGCC.C..gggg.....gggaagagc                                                                                                           >  1:2771207/1‑93 (MQ=37)


       gATGTGACTTTCGATGCCTCCGGCGGGGATATTTTGGGG.AAGATGAAAACCATCCCTTT.CATC.TT.GCCCCAAATAT.CCCCGGGGGCC.C..gggg.....ggcggcgcc                                                                                                           >  2:1973665/1‑93 (MQ=37)


       gATGTGACTTTCGATGCCTCCGGCGGGGATATTTGGGGC.AAGATGAAACCCATCCCTTT.CATC.TT.GCCCCAAATAT.CCCGGGGGGCC.C..gggg.....ggcagcgcc                                                                                                           <  2:408430/101‑9 (MQ=255)


        aTGTGACTTTCGATGCCTCCGGCGGGGAAATTTGGGGC.AAGATGAAAACCATCCCTTT.CATC.TT.GCCCCCAATATACCCGGGGGGCC.G..GGGG.....g.....cagggccc                                                                                                      >  1:4482631/1‑94 (MQ=25)


         tgtgACTTTCGATGCCTCCGGCGGGGGTATTTGGGGG.AAGATGAAAACCCTCCCTTT.CATC.TT.GCCCCCAATAT.CCCCGGGGGCC.CCGGGGG.....G.....C.G.....c....gcccc                                                                                            >  1:2993086/1‑101 (MQ=25)


            gACTTTCGATGCCTCCGGCGGGGGTATTTGGGGG.AAGATGAAAACCATCCCTTT.CATC.TT.GCCCCCAAAAT.CCCCGGGGGCC.C..GGGG.....g.....g.g.....cgcgccccccc                                                                                           >  2:2648150/1‑91 (MQ=25)


                         tCCGGCGGGGATATTTGGGGC.AAGATGAAAACCATCCCTTT.TATC.TT.GCCCCAAATAT.CCCCGGGGGCC.C..GGGGGGCA.G.....C.G.....C....CCCCCGCCCCCTCCGcccc                                                                              >  2:2949799/1‑99 (MQ=18)


                          ccGGCGGGGATATTTGGGGC.AAGATGAAACCCATCCCTTT.CATC.TT.GCCCCAAATAT.CCCGGGGGGCC.C..GGGGGGCA.G.....C.G.....C....CCCCCCCCACCTCCGCCCCg                                                                             >  2:1849659/1‑101 (MQ=18)


                              cggGGATATTTGGGGC.AAGATGAAACCCATCCCTTT.CATC.TT.GCCCCAAATAT.CCCGGGGGGCC.C..GGGGGGCA.G.....C.G.....C....CCCCCGCCACTTCCGCCACGGGGc                                                                         >  2:4215023/1‑101 (MQ=25)


                               ggggATATTTGGGGC.AAGATGAAACCCATCCCTTT.CATC.TT.GCCCCAAATAT.CCCGGGGGGCC.C..GGGGGGCA.G.....C.G.....C....CCCCCGCCCCTCCCGCCACGGGGcg                                                                        >  2:1886278/1‑100 (MQ=18)


                               ggggATATTTGGGGC.AAGATGAAACCCATCCCTTT.CATC.TT.GCCCCAAATAT.CCCGGGGGGCC.C..GGGGGGCA.G.....C.G.....C....CCCCCGCCACTTCCGCCACGGGGCa                                                                        >  2:3166966/1‑101 (MQ=25)


                               ggggAT.TTTTGGGC.AAAGTTAACCCCCCCCCTTT.CTCT.TT.CCCCCAAATTA.CCGGGGGGGCC.G..GGGG.....G.....G.GCCCCCC....CCCCCGCCACTTCCGCCACGGGGCa                                                                        <  1:1226654/101‑1 (MQ=255)


                               gggattatTGGGCGA.AAGAT.AAACCCCACCCTTT.TCTT.TT.GCCCCCAAATC.CCCGGGGGGCC.G..GGGG.....GGGCCCC.C.....C....CCCCCGCCACTTCCGCCACGGGGCa                                                                        <  2:1272302/96‑1 (MQ=255)


                                ggggtttttGGGGAAAAGATAAAACCCACCCCTTT.CATC.TT.GCCCAAAATA..CCCGGGGGGCC.C..GGGGGGGCAG.....C.C.....C....CCCCCGCCACTTCCGCCACGGGGCa                                                                        <  2:1528318/95‑1 (MQ=9)


                                gggATATTTGGGGC.AAGATGAAACCCATCCCTTT.CATC.TT.GCCCCAAATAT.CCCGGGGGGCC.C..GGGGGGCA.G.....C.G.....C....CCCCCGCCACTTCCGCCACGGGGCAg                                                                       >  2:2360976/1‑101 (MQ=25)


                                gggATATTTGGGGC.AAGATGAAACCCATCCCTTT.CATC.TT.GCCCCAAATAT.CCCGGGGGGCC.C..GGGGGGCA.G.....C.G.....C....CCCCCCCCACTTCCGCCACGGGGCAg                                                                       >  2:869358/1‑101 (MQ=21)


                                   atatTTGGGGC.AAGATGAAACCCATCCCTTT.CATC.TT.GCCCCAAATAT.CCCGGGGGGCC.C..GGGGGGCA.G.....C.G.....C....CCCCCGCCACTTCCGCCACGGGGCAgcgc                                                                    >  2:652466/1‑101 (MQ=25)


                                    ttttgggggA.AAGATAACCCCCCCCCTTTT.CATC.TT.CCCCAAAATCC.CCGGGGGGGCCGG..GGGG.....G.....C.GCCC..C....CCCCCGCCACTTCCGCCACGGGGCAGCGcc                                                                   <  1:2865124/96‑1 (MQ=255)


                                    tatTTGGGGC.AAGATGAAACCCATCCCTTT.CATC.TT.GCCCCAAATAT.CCCGGGGGGCC.C..GGGGGGCA.G.....C.G.....C....CCCCCGCCACTTCCGCCACGGGGCAGCGcc                                                                   >  2:4414143/1‑101 (MQ=25)


                                    tatTTGGGGC.AAGATGAAACCCATCCCTTT.CATC.TT.GCCCCAAATAT.CCCGGGGGGCC.C..GGGGGGCA.G.....C.G.....C....CCCCCGCCACTTCCGCCACGGGGCAGCGcc                                                                   >  2:2465541/1‑101 (MQ=21)


                                     atTTGGGGC.AAGATGAAACCCATCCCTTT.CATC.TT.GCCCCAAATAT.CCCGGGGGGCC.C..GGGGGGCA.G.....C.G.....C....CCCCCGCCACTTCCGCCACGGGGCAGCGccc                                                                  >  2:2724658/1‑101 (MQ=25)


                                     atTTGGGGC.AAGATGAAACCCATCCCTTT.CATC.TT.GCCCCAAATAT.CCCGGGGGGCC.C..GGGGGGCA.G.....C.G.....C....CCCCCGCCACTTCCGCCACGGGGCAGCGccc                                                                  >  2:30930/1‑101 (MQ=25)


                                     atTTGGGGC.AAGATGAAACCCATCCCTTT.CATC.TT.GCCCCAAATAT.CCCGGGGGGCC.C..GGGG.....G.....G.G.....CGGCGCCCCCGCCCCCTCCCCCCCCGGGCAGCGccc                                                                  >  2:1595201/1‑101 (MQ=18)


                                      tttGGGGA.CAAAAGAAACCCCTCCCTTT.TGTT.CT.CCCCCAAACTC.CCGGGGGGGCG.CGGGGGG.....G.....C.GCCC..C....CCCCCGCCACTTCCGCCACGGGGCAGCGccc                                                                  <  2:4482336/101‑1 (MQ=255)


                                       ttGGGGC.AAGATGAAACCCATCCCTTT.CATC.TT.GCCCCAAATAT.CCCGGGGGGCC.C..GGGGGGCA.G.....C.G.....C....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCg                                                                >  2:2452655/1‑101 (MQ=25)


                                        tGGGGC.AAGATGAAACCCATCCCTTT.CATC.TT.GCCCCAAATAT.CCCGGGGGGCC.C..GGGGGGCA.G.....C.G.....C....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCgg                                                               >  2:1843511/1‑101 (MQ=25)


                                        tGGGGC.AAGATGAAACCCATCCCTTT.CATC.TT.GCCCCAAATAT.CCCGGGGGGCC.C..GGGGGGCA.G.....C.G.....C....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCgg                                                               >  2:3569181/1‑101 (MQ=25)


                                          gacc.AAGATCAACCCCCCCCCTTC.CATC..T.CCCCCAAATTC.CCCGGGGGGCC.C..GGGG.....GGCCCCC.C.....C....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGcc                                                             <  2:3473768/98‑1 (MQ=255)


                                             c.AAGATGAAACCCATCCCTTT.CATC.TT.GCCCCAAATAT.CCCGGGGGGCC.C..GGGGGGCA.G.....C.G.....C....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGtt                                                          >  2:255102/1‑101 (MQ=25)


                                              gcaaaagAAACCCCCCCCTTTCCATC.TC.CCCCCAAATA..CCGGGGGGGCC.C..GGGG.....GGGC..C.GCC...C....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGt                                                           <  1:1355929/95‑1 (MQ=255)


                                               aaGATAAACCCCATCCCTTT.CA.C.TT.TCCCCAAAATT.CCCGGGGGGGC.C..GGGG.....GGGCACC.C.....C....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTg                                                         <  2:1326313/101‑1 (MQ=255)


                                                aGATGAACCCCACCCTTTT.CATC.TG.CCCCCAAATAC.CCCGGGGGGCC.G..GGGG.....G.....CAGCC...C....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGAc                                                       <  1:4201770/101‑1 (MQ=255)


                                                aGATGAAACCCATCCCTTT.CATC.TT.GCCCCAAATAT.CCCGGGGGGCC.C..GGGGGGCA.G.....C.G.....C....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGa                                                        >  1:4239857/1‑101 (MQ=25)


                                                aGATGAAACCCATCCCTTT.CATC.TT.GCCCCAAATAT.CCCGGGGGGCC.C..GGGGGGCA.G.....C.G.....C....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGa                                                        >  1:2492883/1‑101 (MQ=25)


                                                 gATGAAACCCATCCCTTT.CATC.TT.GCCCCAAATAT.CCCGGGGGGCC.C..GGGGGGCA.G.....C.G.....C....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGAc                                                       >  1:198338/1‑101 (MQ=25)


                                                  aTGAAACCCATCCCTTT.CATC.AT.GCCCCAAATAT.CCCGGGGGGCC.C..GGGGGGCA.G.....C.G.....C....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACg                                                      >  1:2645942/1‑101 (MQ=25)


                                                     aacccccccccTTT.TCTC.CT.GCCCCAAAGTC.CCCGGGGGGCC.CGGGGGG.....G.....C.GCCC..C....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGaa                                                    <  2:2823794/93‑1 (MQ=255)


                                                     aaaCCCATCCCTTT.CATC.TT.GCCCCAAATAT.CCCGGGGGGCC.C..GGGGGGCA.G.....C.G.....C....CCCCCGCCACTTCCGCCACGGGGCCGCGCCCCCGCCGTTGACGAAg                                                   >  2:1581271/1‑101 (MQ=21)


                                                      aaCCCATCCCTTT.CATC.TT.GCCCCAAATAT.CCCGGGGGGCC.C..GGGGGGCA.G.....C.G.....C....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAgg                                                  >  2:4326659/1‑101 (MQ=25)


                                                      aaCCCATCCCTTT.CATC.TT.GCCCCAAATAT.CCCGGGGGGCC.C..GGGGGGCA.G.....C.G.....C....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAgg                                                  >  1:3136026/1‑101 (MQ=25)


                                                       cccccccctttt.CTTC.TT..CCCCAAAATC.CCCGGGGGGCC.C..GGGG.....GGGC..C.GCC...C....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGga                                                 <  1:3067678/92‑1 (MQ=255)


                                                        cccATCCCTTT.CATC.TT.GCCCCAAATAT.CCCGGGGGGCC.C..GGGGGGCA.G.....C.G.....C....CCCCCGCCACTTCCGCCACGGGGCCGCGCCCCGGCCGTTGACGAAgggg                                                >  2:826190/1‑99 (MQ=21)


                                                         ccATCCCTTT.CATC.TT.GCCCCAAATAT.CCCGGGGGGCC.C..GGGGGGCA.G.....C.G.....C....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGgaga                                               >  1:2833371/1‑101 (MQ=25)


                                                            tCCCTTT.CATC.TT.GCCCCAAATAT.CCCGGGGGGCC.C..GGGGGGCA.G.....C.G.....C....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACcg                                            >  1:3846642/1‑101 (MQ=25)


                                                            tCCCTTT.CATC.TT.GCCCCAAATAT.CCCGGGGGGCC.C..GGGGGGCA.G.....C.G.....C....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACcg                                            >  1:83676/1‑101 (MQ=21)


                                                              ccTTT.CCTT.TT.GCCCCAAAATC.CCCGGGGGGCC.G..GGGG.....GGCCCCC.C.....C....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACtgc                                           <  2:1232427/101‑1 (MQ=255)


                                                              ccTTT.CATC.TT.GCCCCAAATAT.CCCGGGGGGCC.C..GGGGGGCA.G.....C.G.....C....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGCAGGAGACcgcg                                          >  2:1603274/1‑101 (MQ=21)


                                                              ccTTT.CATC.TT.GCCCCAAATAT.CCCGGGGGGCC.C..GGGGGGCA.G.....C.G.....C....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACcgcg                                          >  1:1338230/1‑101 (MQ=25)


                                                              ccTTT.CATC.TT.GCCCCAAATAT.CCCGGGGGGCC.C..GGGGGGCA.G.....C.G.....C....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACcgcg                                          >  1:2002142/1‑101 (MQ=25)


                                                              ccTTT.CATC.TT.GCCCCAAATAT.CCCGGGGGGCC.C..GGGGGGCA.G.....C.G.....C....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACcgcg                                          >  1:3621634/1‑101 (MQ=25)


                                                              ccTTT.CACC.GT.CCCCCAAATTC.CCCGGGGGGGC.C..GGGG.....GGGCCCC.C.....C....CCCCCGCCACTTCCGCCACGGGACAGCGCCCCGGCCGTTGACGAAGGAGACcgc                                           <  2:1835342/101‑1 (MQ=255)


                                                               cTTT.CATC.TT.GCCCCAAATAT.CCCGGGGGGCC.C..GGGGGGCA.G.....C.G.....C....CGCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGa                                         >  2:4028967/1‑101 (MQ=25)


                                                                  ttcccc.TT.CCCCCAAATGC.CCCGGGGGGCC.C..GGGG.....GGC...C.GCCC..C....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGAt                                        <  2:3373699/96‑1 (MQ=255)


                                                                  t.CATC.TT.GCCCCAAATAT.CCCGGGGGGCC.C..GGGGGGCA.G.....C.G.....C....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGt                                      >  2:3346597/1‑101 (MQ=25)


                                                                  t.CATC.TT.GCCCCAAATAT.CCCGGGGGGCC.C..GGGGGGCA.G.....C.G.....C....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGt                                      >  2:3558206/1‑101 (MQ=25)


                                                                  t.CATC.TT.GCCCCAAATAT.CCCGGGGGGCC.C..GGGGGGCA.G.....C.G.....C....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGt                                      >  2:3796993/1‑101 (MQ=25)


                                                                    cATC.TT.GCCCCAAATAT.CCCGGGGGGCC.C..GGGGGGCA.G.....C.G.....C....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGtt                                     >  2:3897908/1‑101 (MQ=25)


                                                                    cATC.TT.GCCCCAAATAT.CCCGGGGGGCC.C..GGGGGGCA.G.....C.G.....C....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGtt                                     >  1:3058043/1‑101 (MQ=25)


                                                                    cATC.TT.GCCCCAAATAT.CCCGGGGGGCC.C..GGGGGGCA.G.....C.G.....C....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGtt                                     >  2:4469830/1‑101 (MQ=25)


                                                                     aTC.TT.GCCCCAAATAT.CCCGGGGGGCC.C..GGGGGGCA.G.....C.G.....C....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGttt                                    >  1:1349631/1‑101 (MQ=25)


                                                                     aTC.TT.GCCCCAAATAT.CCCGGGGGGCC.C..GGGGGGCA.G.....C.G.....C....CCCCCCCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGttt                                    >  1:1897689/1‑101 (MQ=25)


                                                                          t.GCCCCAAATAT.CCCGGGGGGCC.C..GGGGGGCA.G.....C.G.....C....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCaaa                                >  1:1549628/1‑101 (MQ=25)


                                                                             ccccAAATAT.CCCGGGGGGCC.C..GGGGGGCA.G.....C.G.....C....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAg                              >  1:2541920/1‑101 (MQ=25)


                                                                             ccccAAATAT.CCCGGGGGGCC.C..GGGGGGCA.G.....C.G.....C....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCAGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAg                              >  2:3654005/1‑101 (MQ=25)


                                                                                 aaaTAT.CCCGGGGGGCC.C..GGGGGGCA.G.....C.G.....C....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATcc                          >  1:1182454/1‑101 (MQ=25)


                                                                                  aaTAT.CCCGGGGGGCC.C..GGGGGGCA.G.....C.G.....C....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCt                         >  2:2849596/1‑101 (MQ=25)


                                                                                  aaTAT.CCCGGGGGGCC.C..GGGGGGCA.G.....C.G.....C....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCt                         >  1:695372/1‑101 (MQ=25)


                                                                                   atat.CCCGGGGGGCC.C..GGGGGGCA.G.....C.G.....C....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTg                        >  2:449998/1‑101 (MQ=37)


                                                                                   atat.CCCGGGGGGCC.C..GGGGGGCA.G.....C.G.....C....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTg                        >  2:3511336/1‑101 (MQ=37)


                                                                                   atat.CCCGGGGGGCC.C..GGGGGGCA.G.....C.G.....C....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTg                        >  2:645818/1‑101 (MQ=37)


                                                                                    tat.CCCGGGGGGCC.C..GGGGGGCA.G.....C.G.....C....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGa                       >  1:3437014/1‑101 (MQ=37)


                                                                                     at.CCCGGGGGGCC.C..GGGGGGCA.G.....C.G.....C....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGAt                      >  2:2788189/1‑101 (MQ=37)


                                                                                     at.CCCGGGGGGCC.C..GGGGGGCA.G.....C.G.....C....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGGTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGac                      >  2:3661330/1‑100 (MQ=25)


                                                                                      t.CCCGGGGGGCC.C..GGGGGGCA.G.....C.G.....C....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGAGGAAGGAGACCGCGATGTTTCAAAAGATCCTGATc                     >  1:4002554/1‑101 (MQ=37)


                                                                                        cccGGGGGGCC.C..GGGGGGCA.G.....C.G.....C....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCg                    >  1:3028055/1‑101 (MQ=37)


                                                                                         ccGGGGGGCC.C..GGGGGGCA.G.....C.G.....C....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGc                   >  1:1907525/1‑101 (MQ=37)


                                                                                          cGGGGGGCC.C..GGGGGGCA.G.....C.G.....C....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTNAAAAGATCCTGATCGcc                  >  2:892503/1‑101 (MQ=37)


                                                                                          cGGGGGGCC.C..GGGGGGCA.G.....C.G.....C....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGcc                  >  1:4382835/1‑101 (MQ=37)


                                                                                                       cggggggcag.....c.g.....c....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGcc         >  1:2995333/10‑101 (MQ=255)


                                                                                                       cggggggcag.....c.g.....c....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGcc         >  2:938051/10‑101 (MQ=255)


                                                                                                        ggggggcag.....c.g.....c....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCg        >  1:1753373/9‑101 (MQ=255)


                                                                                                        ggggggcag.....c.g.....c....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCg        >  1:2394281/9‑101 (MQ=255)


                                                                                                        ggggggcag.....c.g.....c....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCg        >  2:4586190/9‑101 (MQ=255)


                                                                                                        ggggggcag.....c.g.....c....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCg        >  1:2907105/9‑101 (MQ=255)


                                                                                                        ggggggcag.....c.g.....c....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCg        >  1:3827010/9‑101 (MQ=255)


                                                                                                        ggggggcag.....c.g.....c....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCg        >  1:733607/9‑101 (MQ=255)


                                                                                                        ggggggcag.....c.g.....c....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCg        >  1:991799/9‑101 (MQ=255)


                                                                                                             gcag.....c.g.....c....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATc   >  1:325783/4‑101 (MQ=255)


                                                                                                              cag.....c.g.....c....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCg  >  2:1192324/3‑101 (MQ=255)


                                                                                                              cag.....c.g.....c....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCg  >  2:3318101/3‑101 (MQ=255)


TCTTCCGGATGTGACTTTCGATGCCTCCGGCGGGGATATTTGGGGC.AAGATGAAACCCATCCCTTT.CATC.TT.GCCCCAAATAT.CCCGGGGGGCC.C..GGGG.....G.....C.G.....C....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCG  >  NC_014034/1639907‑1640104

Base quality scores:


ATCG

< 3 ≤


ATCG

< 17 ≤


ATCG

< 27 ≤


ATCG

< 33 ≤


ATCG

< 40 ≤


ATCG