New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 1796452 =186 (0.850)2 (0.010) 2/184 37.1 0.01 coding (652/1170 nt) RCAP_rcc01659 hypothetical protein
?NC_014034 2290478 = 196 (0.830)coding (257/279 nt) phaF monovalent cation/proton antiporter subunit F
Rejected: Position hash score below cutoff.

Only 100 of 196 total aligned reads displayed.

CTTTGCCCGCGGCCAGCTGCGCGAGAATGCGGCGGTGCTGACGCTGATCCGTTCGGCCTGGGAATTGCGGCCCTTCTGTTTCGCCCATCAGCGCCCGACCGCGCGGCGGATGGTGGTGACGCGGGCCGATCCCTCGCGCAGGCTGGTGGCGCGGATCAACGACGAACCGGCGGCGCGGGAATATGCCCGCGCGCTGGGGCG  >  NC_014034/1796352‑1796552
                                                                                                    |                                                                                                    
cTTTGCCCGCGGCCAGCTGCGCGAGAATGCGGCGGTGCTGACGCTGATCCGTTCGGCCTGGGAATTGCGGCCCTTCTGTTTCGCCCATCAGCGCCCGACcg                                                                                                      >  2:585228/1‑101 (MQ=255)
 tttGCCCGCGGCCAGCTGCGCGAGAATGCGGCGGTGCTGACGCTGATCCGTTCGGCCTGGGAATTGCGGCCCTTCTGTTTCGCCCATCAGCGCCCGACcgc                                                                                                     >  2:3299965/1‑101 (MQ=255)
 tttGCCCGCGGCCAGCTGCGCGAGAATGCGGCGGTGCTGACGCTGATCCGTTCGGCCTGGGAATTGCGGCCCTTCTGTTTCGCCCATCAGCGCCCGACcgc                                                                                                     >  2:3211388/1‑101 (MQ=255)
  ttGCCCGCGGCCAGCTGCGCGAGAATGCGGCGGTGCTGACGCTGATCCGTTCGGCCTGGGAATTGCGGCCCTTCTGTTTCGCCCATCAGCGCCCGACcgcg                                                                                                    >  2:2915127/1‑101 (MQ=255)
      ccGCGGCCAGCTGCGCGAGAATGCGGCGGTGCTGACGCTGATCCGTTCGGCCTGGGAATTGCGGCCCTTCTGTTTCGCCCATCAGCGCCCGACCGCgcggc                                                                                                <  1:1245065/101‑1 (MQ=255)
          ggCCAGCTGCGCGAGAATGCGGCGGTGCTGACGCTGATCCGTTCGGCCTGGGAATTGCGGCCCTTCTGTTTCGCCCATCAGCGCCCGACCGCGCGGCGGAt                                                                                            >  2:4002996/1‑101 (MQ=255)
          ggCCAGCTGCGCGAGAATGCGGCGGTGCTGACGCTGATCCGTTCGGCCTGGGAATTGCGGCCCTTCTGTTTCGCCCATCAGCGCCCGACCGCGCGGCGGAt                                                                                            >  1:1420155/1‑101 (MQ=255)
          ggCCAGCTGCGCGAGAATGCGGCGGTGCTGACGCTGATCCGTTCGGCCTGGGAATTGCGGCCCTTCTGTTTCGCCCATCAGCGCCCGACCGCGCGGCGGAt                                                                                            >  2:2669010/1‑101 (MQ=255)
           gCCAGCTGCGCGAGAATGCGGCGGTGCTGACGCTGATCCGTTCGGCCTGGGAATTGCGGCCCTTCTGTTTCGCCCATCAGCGCCCGACCGCGCGGCGGAtg                                                                                           <  2:3384582/101‑1 (MQ=255)
           gCCAGCTGCGCGAGAATGCGGCGGTGCTGACGCTGATCCGTTCGGCCTGGGAATTGCGGCCCTTCTGTTTCGCCCATCAGCGCCCGACCGCGCGGCGGAtg                                                                                           >  1:2561397/1‑101 (MQ=255)
           gCCAGCTGCGCGAGAATGCGGCGGTGCTGACGCTGATCCGTTCGGCCTGGGAATTGCGGCCCTTCTGTTTCGCCCATCAGCGCCCGACCGCGCGGCGGAtg                                                                                           >  2:1238484/1‑101 (MQ=255)
           gCCAGCTGCGCGAGAATGCGGCGGTGCTGACGCTGATCCGTTCGGCCTGGGAATTGCGGCCCTTCTGTTTCGCCCATCAGCGCCCGACCGCGCGGCGGAtg                                                                                           >  1:1792344/1‑101 (MQ=255)
             cAGCTGCGCGAGAATGCGGCGGTGCTGACGCTGATCCGTTCCGCCTGGGAATTGCGGCCCTTCTGTTTCGCCCATCAGCGCCCGACCGCGCGGCGGAtggt                                                                                         <  1:3649402/101‑1 (MQ=255)
              aGCTGCGCGAGAATGCGGCGGTGCTGACGCTGATCCGTTCGGCCTGGGAATTGCGGCCCTTCTGTTTCGCCCATCAGCGCCCGACCGCGCGGCGGAtggtg                                                                                        >  1:4397091/1‑101 (MQ=255)
              aGCTGCGCGAGAATGCGGCGGTGCTGACGCTGATCCGTTCGGCCTGGGAATTGCGGCCCTTCTGTTTCGCCCATCAGCGCCCGACCGCGCGGCGGAtggtg                                                                                        >  2:1096750/1‑101 (MQ=255)
               gCTGCGCGAGAATGCGGCGGTGCTGACGCTGATCCGTTCGGCCTGGGAATTGCGGCCCTTCTGTTTCGCCCATCAGCGCCCGACCGCGCGGCGGAtggtgg                                                                                       <  1:3120687/101‑1 (MQ=255)
                cTGCGCGAGAATGCGGCGGTGCTGACGCTGATCCGTTCGGCCTGGGAATTGCGGCCCTTCTGTTTCGCCCATCAGCGCCCGACCGCGCGGCGGATggtggt                                                                                      >  1:3846350/1‑101 (MQ=255)
                 tGCGCGAGAATGCGGCGGTGCTGACGCTGATCCGTTCGGCCTGGGAATTGCGGCCCTTCTGTTTCGCCCATCAGCGCCCGACCGCGCGGCGGATGgtggtg                                                                                     <  1:2032634/101‑1 (MQ=255)
                 tGCGCGAGAATGCGGCGGTGCTGACGCTGATCCGTTCGGCCTGGGAATTGCGGCCCTTCTGTTTCGCCCATCAGCGCCCGACCGCGCGGCGGATGgtggtg                                                                                     <  2:1006527/101‑1 (MQ=255)
                   cgcgAGAATGCGGCGGTGCTGACGCTGATCCGTTCGGCCTGGGAATTGCGGCCCTTCTGTTTCGCCCATCAGCGCCCGACCGCGCGGCGGATGGTGGTGAc                                                                                   >  1:3326843/1‑101 (MQ=255)
                    gcgAGAATGCGGCGGTGCTGACGCTGATCCGTTCGGCCTGGGAATTGCGGCCCTTCTGTTTCGCCCATCAGCGCCCGACCGCGCGGCGGATGGTGGTGAcg                                                                                  >  2:3602676/1‑101 (MQ=255)
                     cgAGAATGCGGCGGTGCTGACGCTGATCCGTTCGGCCTGGGAATTGCGGCCCTTCTGTTTCGCCCATCAGCGCCCGACCGCGCGGCGGATGGTGGTGAcgc                                                                                 >  2:2805174/1‑101 (MQ=255)
                      gagaATGCGGCGGTGCTGACGCTGATCCGTTCGGCCTGGGAATTGCGGCCCTTCTGTTTCGCCCATCAGCGCCCGACCGCGCGGCGGATGGTGGTGAcgcg                                                                                >  2:542716/1‑101 (MQ=255)
                       agaATGCGGCGGTGCTGACGCTGATCCGTTCGGCCTGGGAATTGCGGCCCTTCTGTTTCGCCCATCAGCGCCCGACCGCGCGGCGGATGGTGGTGACGCgg                                                                               >  1:4345820/1‑101 (MQ=255)
                         aaTGCGGCGGTGCTGACGGTGATCCGTTCGGCCTGGGAATTGCGGCGCTTCTGTTTCGCCCATCAGCGCCCGACCGCGCGGCGGATGGTGGTGACGCGGGc                                                                             <  2:2549714/101‑1 (MQ=255)
                          aTGCGGCGGTGCTGACGCTGATCCGTTCGGCCTGGGAATTGCGGCCCTTCTGTTTCGCCCATCAGCGCCCGACCGCGCGGCGGATGGTGGTGACGCGGGcc                                                                            >  2:3278071/1‑101 (MQ=255)
                           tGCGGCGGTGCTGACGCTGATCCGTTCGGCCTGGGAATTGCGGCCCTTCTGTTTCGCCCATCAGCGCCCGACCGCGCGGCGGATGGTGGTGACGCGGGCCg                                                                           >  2:2458312/1‑101 (MQ=255)
                              ggcggTGCTGACGCTGATCCGTTCGGCCTGGGAATTGCGGCCCTTCTGTTTCGCCCATCAGCGCCCGACCGCGCGGCGGATGGTGGTGACGCGGGCCGATc                                                                        >  2:3933779/1‑101 (MQ=255)
                              ggcggTGCTGACGCTGATCCGTTCGGCCTGGGAATTGCGGCCCTTCTGTTTCGCCCATCAGCGCCCGACCGCGCGGCGGATGGTGGTGACGCGGGCCGATc                                                                        <  2:3461891/101‑1 (MQ=255)
                              ggcagTGGTGACGCTGATCCGTTCGGCCTGGGAATTGCGGCCCTTCTGTTTCGCCCATCAGCGCCCGACCGCGCGGCGGATGGTGGTGACGCGGGCCGATc                                                                        <  1:4588543/101‑1 (MQ=255)
                               gcggTGCTGACGCTGATCCGTTCGGCCTGGGAATTGCGGCCCTTCTGTTTCGCCCATAAGCGCCCGACCGCGCGGCGGATGGTGGTGACGCGGGCCGATcc                                                                       <  1:4476219/101‑1 (MQ=255)
                                 ggTGCTGACGCTGATCCGTTCGGCCTGGGAATTGCGGCCCTTCTGTTTCGCCCATCAGCGCCCGACCGCGCGGCGGATGGTGGTGACGCGGGCCGATCCCt                                                                     >  2:2895125/1‑101 (MQ=255)
                                 ggTGCTGACGCTGATCCGTTCGGCCTGGGAATTGCGGCCCTTCTGTTTCGCCCATCAGCGCCCGACCGCGCGGCGGATGGTGGTGACGCGGGCCGATCCCt                                                                     >  2:2371878/1‑101 (MQ=255)
                                  gTGCTGACGCTGATCCGTTCGGCCTGGGAATTGCGGCTCTTCTGTTTCGCCCATCAGCGCCCGACCGCGCGGCGGATGGTGGTGACGCGGGCCGATCCCTc                                                                    <  2:1134505/101‑1 (MQ=255)
                                  gTGCTGACGCTGATCCGTTCGGCCTGGGAATTGCGGCCCTTCTGTTTCGCCCATCAGCGCCCGACCGCGCGGCGGATGGTGGTGACGCGGGCCGATCCCTc                                                                    <  1:1096839/101‑1 (MQ=255)
                                  gTGCTGACGCTGATCCGTTCGGCCTGGGAATTGCGGCCCTTCTGTTTCGCCCATCAGCGCCCGACCGCGCGGCGGATGGTGGTGACGCGGGCCGATCCCTc                                                                    <  2:2772550/101‑1 (MQ=255)
                                  gTGCTGACGCTGATCCGTTCGGCCTGGGAATTGCGGCCCTTCTGTTTCGCCCATCAGCGCCCGACCGCGCGGCGGATGGTGGTGACGCGGGCCGATCCCTc                                                                    <  1:337938/101‑1 (MQ=255)
                                   tGCTGACGCTGATCCGTTCGGCCTGGGAATTGCGGCCCTTCTGTTTCGCCCATCAGCGCCCGACCGCGCGGCGGATGGTGGTGACGCGGGCCGATCCCTcg                                                                   >  1:1529601/1‑101 (MQ=255)
                                   tGCTGACGCTGATCCGTTCGGCCTGGGAATTGCGGCCCTTCTGTTTCGCCCATCAGCGCCCGACCGCGCGGCGGATGGTGGTGACGCGGGCCGATCCCTcg                                                                   <  1:70135/101‑1 (MQ=255)
                                    gCTGACGCTGATCCGTTCGGCCTGGGAATTGCGGCCCTTCTGTTTCGCCCATCAGCGCCCGACCGCGCGGCGGATGGTGGTGACGCGGGCCGATCCCTcgc                                                                  <  1:3398885/101‑1 (MQ=255)
                                    gCTGACGCTGATCCGTTCGGCCTGGGAATTGCGGCCCTTCTGTTTCGCCCATCAGCGCCCGACCGCGCGGCGGATGGTGGTGACGCGGGCCGATCCCTcgc                                                                  >  2:4545543/1‑101 (MQ=255)
                                       gACGCTGATCCGTTCGGCCTGGGAATTGCGGCCCTTCTGTTTCGCCCATCAGCGCCCGACCGCGCGGCGGATGGTGGTGACGCGGGCCGATCCCTCGCGCa                                                               >  2:4439717/1‑101 (MQ=255)
                                        aCGCTGATCCGTTCGGCCTGGGAATTGCGGCCCTTCTGTTTCGCCCATCAGCGCCCGACCGCGCGGCGGATGGTGGTGACGCGGGCCGATCCCTCGCGCAg                                                              <  1:3962286/101‑1 (MQ=255)
                                            tGATCCGTTCGGCCTGGGAATTGCGGCCCTTCTGTTTCGCCCATCAGCGCCCGACCGCGCGGCGGATGGTGGTGACGCGGGCCGATCCCTCGCGCAGGCtg                                                          >  2:3647885/1‑101 (MQ=255)
                                               tCCGTTCGGCCTGGGAATTGCGGCCCTTCTGTTTCGCCCATCAGCGCCCGACCGCGCGGCGGATGGTGGTGACGCGGGCCGATCCCTCGCGCAGGCtggtg                                                       <  2:868760/101‑1 (MQ=255)
                                                 cGTTCGGCCTGGGAATTGCGGCCCTTCTGTTTCGCCCATCAGCGCCCGCCCGCGCGGCGGATGGTGGGGACGCGGGCCGATCCCTCGCGCAGGCTGGTGgc                                                     <  2:1670925/101‑1 (MQ=255)
                                                 cGTTCGGCCTGGGAATTGCGGCCCTTCTGTTTCGCCCATCAGCGCCCGACCGCGCGGCGGATGGTGGTGACGCGGGCCGATCCCTCGCGCAGGCTGGTGgc                                                     >  1:1197843/1‑101 (MQ=255)
                                                 cGTTCGGCCTGGGAATTGCGGCCCTTCTGTTTCGCCCATCAGCGCCCGACCGCGCGGCGGATGGTGGTGACGCGGGCCGATCCCTCGCGAAGGCTGGTGgc                                                     <  2:3304360/101‑1 (MQ=255)
                                                  gTTCGGCCTGGGAATTGCGGCCCTTCTGTTTCGCCCATCAGCGCCCGACCGCGCGGCGGATGGTGGTGACGCGGGCCGATCCCTCGCGCAGGCTGGTGgcg                                                    >  2:491503/1‑101 (MQ=255)
                                                   ttCGGCCTGGGAATTGCGGCCCTTCTGTTTCGCCCATCAGCGCCCGACCGCGCGGCGGATGGTGGTGACGCGGGCCGATCCCTCGCGCAGGCTGGTGgcgc                                                   >  2:646397/1‑101 (MQ=255)
                                                    tCGGCCTGGGAATTGCGGCCCTTCTGTTTCGCCCATCAGCGCCCGACCGCGCGGCGGATGGTGGTGACGCGGGCCGATCCCTCGCGCAGGCTGGTGGcgcg                                                  <  2:1803911/101‑1 (MQ=255)
                                                     cGGCCTGGGAATTGCGGCCCTTCTGTTTCGCCCATCAGCGCCCGACCGCGCGGCGGATGGTGGTGACGCGGGCCGATCCCTCGCGCAGGCTGGTGGCGCgg                                                 >  1:660503/1‑101 (MQ=255)
                                                     cGGCCTGGGAATTGCGGCCCTTCTGTTTCGCCCATCAGCGCCCGACCGCGCGGCGGATGGTGGTGACGCGGGCCGATCCCTCGCGCAGGCTGGTGGCGCgg                                                 >  1:71732/1‑101 (MQ=255)
                                                     cGGCCTGGGAATTGCGGCCCTTCTGTTTCGCCCATCAGCGCCCGACCGCGCGGCGGATGGTGGTGACGCGGGCCGATCCCTCGCGCAGGCTGGTGGCGCgg                                                 >  1:4334802/1‑101 (MQ=255)
                                                     cGGCCTGGGAATTGCGGCCCTTCTGTTTCGCCCATCAGCGCCCGACCGCGCGGCGGATGGTGGTGACGCGGGCCGATCCCTCGCGCAGCCTGGTGGCGCgg                                                 >  1:1847949/1‑101 (MQ=255)
                                                      ggCCTGGGAATTGCGGCCCTTCTGTTTCGCCCATCAGCGCCCGACCGCGCGGCGGATGGTGGTGACGCGGGCCGATCCCTCGCGCAGGCTGGTGGCGCGGa                                                >  1:1239639/1‑101 (MQ=255)
                                                       gCCTGGGAATTGCGGCCCTTCTGTTTCGCCCATCAGCGCCCGACCGCGCGGCGGATGGTGGTGACGCGGGCCGATCCCTCGCGCAGGCTGGTGGcgcgaaa                                               <  1:1031155/101‑4 (MQ=255)
                                                        ccTGGGAATTGCGGCCCTTCTGTTTCGCCCATCAGCGCCCGACCGCGCGGCGGATGGTGGTGACGCGGGCCGATCCCTCGCGCAGGCTGGTGGCGCGGATc                                              <  2:449129/101‑1 (MQ=255)
                                                        ccTGGGAATTGCGGCCCTTCTGTTTCGCCCATCAGCGCCCGACCGCGCGGCGGATGGTGGTGACGCGGGCCGATCCCTCGCGCAGGCTGGCGGCGCGGATc                                              >  2:2305914/1‑101 (MQ=255)
                                                         cTGGGAATTGCGGCCCTTCTGTTTCGCCCATCAGCGCCCGACCGCGCGGCGGATGGTGGTGACGCGGGCCGATCCCTCGCGCAGGCTGGTGGCGCGGATCa                                             >  2:4211388/1‑101 (MQ=255)
                                                         cTGGGAATTGCGGCCCTTCTGTTTCGCCCATCAGCGCCCGACCGCGCGGCGGATGGTGGTGACGCGGGCCGATCCCTCGCGCAGGCTGGGGGCGCGGATCa                                             >  2:828610/1‑101 (MQ=255)
                                                          tGGGAATTGCGGCCCTTCTGTTTCGCCCATCAGCGCCCGACCGCGCGGCGGATGGTGGTGACGCGGGCCGATCCCTCGCGCAGGCTGGTGGCGCGGATCaa                                            <  1:1397831/101‑1 (MQ=255)
                                                              aaTTGCGGCCCTTCTGTTTCGCCCATCAGCGCCCGACCGCGCGGCGGATGGTGGTGACGCGGGCCGATCCCTCGCGCAGGCTGGTGGCGCGGATCAacgac                                        <  1:2197308/101‑1 (MQ=255)
                                                               aTTGCGGCCCTTCTGTTTCGCCCATCAGCGCCCGACCGCGGGGCGGATGGTGGCGACGCGGGCCGATCCCTCGCGCAGGCTGGTGGCGCGGATCAacgacg                                       <  1:793434/101‑1 (MQ=255)
                                                               aTTGCGGCCCTTCTGTTTCGCCCATCAGCGCCCGACCGCGCGGCGGATGGTGGTGACGCGGGCCGATCCCTCGCGCAGGCTGGTGGCGCGGATCAacgacg                                       <  2:366845/101‑1 (MQ=255)
                                                                 tGCGGCCCTTCTGTTTCGCCCATCAGCGCCCGACCGCGCGGCGGATGGTGGTGACGCGGGCCGATCCCTCGCGCAGGCTGGTGGCGCGGATCAACGACGaa                                     >  1:1662028/1‑101 (MQ=255)
                                                                  gCGGCCCTTCTGTTTCGCCCATCAGCGCCCGACCGCGCGGCGGATGGTGGTGACGCGGGCCGATCCCTCGCGCAGGCTGGTGGCGCGGATCAACGACGAAc                                    <  1:3977676/101‑1 (MQ=255)
                                                                    ggCCCTTCTGTTTCGCCCATCAGCGCCCGACCGCGCGGCGGATGGTGGTGACGCGGGCCGATCCCTCGCGCAGGCTGGTGGCGCGGATCAACGACGAACcg                                  >  1:603843/1‑101 (MQ=255)
                                                                    ggCCCTTCTGTTTCGCCCATCAGCGCCCGACCGCGCGGCGGATGGTGGTGACGCGGGCCGATCCCTCGCGCAGGCTGGTGGCGCGGATCAACGACGAACcg                                  <  2:4219263/101‑1 (MQ=255)
                                                                      gccTTCTTTTTCGCCCTGCACCGGCCGACCGCGCGGCGGAGGGTGGTGACGCGGGCCTATCCCTCGCGCAGGCGGGTGGTGCGGATCAACGACGAACcggc                                <  2:310605/100‑1 (MQ=255)
                                                                       ccTTCTGTTTCGCCCATCAGCGCCCGACCGCGCGGCGGATGGTGGTGACGCGGGCCGATCCCTCGCGCAGGCTGGTGGCGCGGATCAACGACGAACcggcg                               <  2:603782/101‑1 (MQ=255)
                                                                        cgtcggTTTCCCCCATCAGCCCCCGACCGCGCGGCGGATGGTGGTGACGCGGGCCGATCCCTCGCGCAGGCTGGTGGCGCGGATCAACGACGAACcggcgg                              <  2:3364710/96‑1 (MQ=255)
                                                                           cTGTTTCGCCCATCAGCGCCCGACCGCGCGGCGGATGGTGGTGACGCGGGCCGATCCCTCGCGCAGGCTGGTGGCGCGGATCAACGACGAACCGGCGgcgc                           >  1:3874545/1‑101 (MQ=255)
                                                                           cTGTTTCGCCCATCAGCGCCCGACCGCGCGGCGGATGGTGGTGACGCGGGCCGATCCCTCGCGCAGGCTGGTGGCGCGGATCAAAGACGAACCGGCGgcgc                           >  1:2232549/1‑101 (MQ=255)
                                                                           cTGTTTCGCCCATCAGCGCCCGACCGCGCGGCGGATGGTGGTGACGCGGGCCGATCCCTCGCGCAGGCTGGGGGCGCGGATCAACGACGAACCGGCGgcgc                           >  1:1078636/1‑101 (MQ=255)
                                                                              tttCGCCCATCAGCGCCCGACCGCGCGGCGGATGGTGGTGACGCGGGCCGATCCCTCGCGCAGGCTGGTGGCGCGGATCAACGACGAACCGGCGGCGCggg                        <  2:2385493/101‑1 (MQ=255)
                                                                              tttCGCCCATCAGCGCCCGACCGCGCGGCGGATGGTGGTGACGCGGGCCGATCCCTCGCGCAGGCTGGTGGCGCGGATCAACGACGAACCGGCGGCGCggg                        >  2:193838/1‑101 (MQ=255)
                                                                               tccGCCCATCAGCGCCCGCCCGCGCGGCGGATGGTGGTGACGCGGGCCGATCCCTCGCGCAGGCTGGTGGCGCGGATCAACGACGAACCGGCGGCGCGGGa                       <  2:4336563/99‑1 (MQ=255)
                                                                                 cGCCCATCAGCGCCCGACCGCGCGGCGGATGGTGGTGACGCGGGCCGATCCCTCGCGCAGGCTGGTGGCGCGGATCAACGACGAACCGGCGGGGCGGGaaa                     >  2:1480641/1‑100 (MQ=255)
                                                                                  gCCCATCAGCGCCCGACCGCGCGGCGGATGGTGGTGACGCGGGCCGATCCCTCGCGCAGGCTGGTGGCGCGGATCAACGACGAACCGGCGGAGCGGGAata                    >  1:270305/1‑101 (MQ=255)
                                                                                   cccATCGGCGCCCGACCGCGCGGCGGATGGTGGTGACGCGGGCCGATCCCTCGCGCAGGCTGGTGGCGCGGATCAACGACGAACCGGCGGCGCGGGAatat                   <  1:1004461/101‑1 (MQ=255)
                                                                                      aTCAGCGCCCGACCGCGCGGCGGATGGTGGTGACGCGGGCCGATCCCTCGCGCAGGCTGGTGGCGCGGATCAACGACGAACCGGCGGCGCGGGAATATGcc                >  2:2010362/1‑101 (MQ=255)
                                                                                      aTCAGCGCCCGACCGCGCGGCGGATGGTGGTGACGCGGGCCGATCCCTCGCGCAGGCTGGTGGCGCGGATCAACGACGAACCGGCGGCGCGGGAATATGcc                <  1:3278316/101‑1 (MQ=255)
                                                                                        cAGCGCCCGACCGCGCGGCGGATGGTGGTGACGCGGGCCGATCCCTCGCGCAGGCTGGTGGCGCGGATCAACGACGAACCGGCGGCGCGGGAATATGCCcg              <  1:2420887/101‑1 (MQ=255)
                                                                                        cAGCGCCCGACCGCGCGGCGGATGGTGGTGACGCGGGCCGATCCCTCGCGCAGGCTGGTGGCGCGGATCAACGACGAACCGGCGGCGCGGGAATATGCCcg              >  1:998381/1‑101 (MQ=255)
                                                                                         aGCGCCCGACCGCGCGGCGGATGGTGGTGACGCGGGCCGATCCCTCGCGCAGGCTGGTGGCGCGGATCAACGACGAACCGGCGGCGCGGGAATATGCCcgc             >  1:31818/1‑101 (MQ=255)
                                                                                         aGCGCCCGACCGCGCGGCGGATGGTGGTGACGCGGGCCGATCCCTCGCGCAGGCTGGTGGCGCGGATCAACGACGAACCGGCGGCGCGGGAATATGCCcgc             <  1:3211631/101‑1 (MQ=255)
                                                                                         aGCGCCCGACCGCGCGGCGGATGGTGGTGACGCGGGCCGATCCCTCGCGCAGGCTGGTGGCGCGGATCAACGACGAACCGGCGGCGCGGGAATATGCCcgc             >  1:3507057/1‑101 (MQ=255)
                                                                                         aGCGCCCGACCGCGCGGCGGATGGTGGTGACGCGGGCCGATCCCTCGCGCAGGCTGGTGGCGCGGATCAACGACGAACCGGCGGAGCGGGAATATGCCcgc             >  2:3418009/1‑101 (MQ=255)
                                                                                         aGCCCCCGACCGCGCGGCGGATGGTGGTGACGCGGGCCGATCCCTCGCGCAGGCTGGTGGCGCGGATCAACGACGAACCGGCGGCGCGGGAATATGccccc             >  2:47352/1‑99 (MQ=255)
                                                                                          atccggaacggcgcgGCGGATGGTGGTGACGCGGGCCGATCCCTCGCGCAGGCTGGTGGCGCGGATCAACGACGAACCGGCGGCGCGGGAATATGCCcgcg            >  2:1186186/11‑101 (MQ=255)
                                                                                           cgcCCGACCGCGCGGCGGATGGTGGTGACGCGGGCCGATCCCTCGCGCAGGCTGGTGGCGCGGATCAACGACGAACCGGCGGCGCGGGAATATGCCcgcgc           >  1:228681/1‑101 (MQ=255)
                                                                                            gcCCGACCGCGCGGCGGATGGTGGTGACGCGGGCCGATCCCTCGCGCAGGCTGGTGGCGCGGATCAACGACGAACCGGCGGCGCGGGAATATGCCcgcgcg          >  2:103580/1‑101 (MQ=255)
                                                                                            gcCCGACCGCGCGGCGGATGGTGGTGACGCGCGCCGATCCCTCGCGCAGGCTGGTGGCGCGGATCAACGACGAACCGGCCGGGCGGGAAGATGCCcgcgcg          >  1:4153777/1‑101 (MQ=255)
                                                                                              ccGACCGGGCGGCGGATGGTGGTGACGCGGGCCGATCCCTCGCGCAGGCTGGTGGCGCGGATCAACGACGAACCGGCGGCGCGGGAATATGCCCGCGCGCt        <  1:859072/101‑1 (MQ=255)
                                                                                              ccGACCGCGCGGCGGATGGTGGTGACGCGGGCCGATCCCTCGCGCAGGCTGGTGGCGCGGATCAACGACGAACCGGCGGGGCGGGAATATGCCCGCGCGCt        >  1:3457452/1‑101 (MQ=255)
                                                                                               cGACCGCGCGGCGGATGGTGGTGACGCGGGCCGATCCCTCGCGCAGGCTGGTGGCGCGGATCAACGACGAACCGGCGGCGCGGGAATATGCCCGCGCGCTg       >  1:1548119/1‑101 (MQ=255)
                                                                                                gACCGCGCGGCGGATGGTGGTGACGCGGGCCGATCCCTCGCGCAGGCTGGTGGCGCGGATCAACGACGAACCGGCGGCGCGGGAATATGCCCGCGCGCTgg      <  1:569308/101‑1 (MQ=255)
                                                                                                 gccGCGCGGCGGATGGTGGTGACGCGGGCCGATCCCTCGCGCAGGCTGGTGGCGCGGATCAACGACGAACCGGCGGCGCGGGAATATGCCCGCGCGCTggg     <  1:491551/100‑1 (MQ=255)
                                                                                                   cgcgcgGCGGATGGTGGTGACGCGGGCCGATCCCTCGCGCAGGCTGGTGGCGCGGATCAACGACGAACCGGCGGCGCGGGAATATGCCCGCGCGCTGGggc   <  1:2372040/101‑1 (MQ=255)
                                                                                                    |                                                                                                    
CTTTGCCCGCGGCCAGCTGCGCGAGAATGCGGCGGTGCTGACGCTGATCCGTTCGGCCTGGGAATTGCGGCCCTTCTGTTTCGCCCATCAGCGCCCGACCGCGCGGCGGATGGTGGTGACGCGGGCCGATCCCTCGCGCAGGCTGGTGGCGCGGATCAACGACGAACCGGCGGCGCGGGAATATGCCCGCGCGCTGGGGCG  >  NC_014034/1796352‑1796552

Base quality scores:  ATCG  < 3 ≤  ATCG  < 18 ≤  ATCG  < 27 ≤  ATCG  < 33 ≤  ATCG  < 40 ≤  ATCG