| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_014034 | = 974307 | 2 (0.010) | 9 (0.040) | 2/172 | 35.8 | 0.34 | intergenic (+187/+72) | RCAP_rcc00884/RCAP_rcc00885 | hypothetical protein/hypothetical protein |
| ? | NC_014034 | 2880557 = | 33 (0.140) | coding (1028/1053 nt) | pdxA | 4‑hydroxythreonine‑4‑phosphate dehydrogenase | |||||
| Rejected: Position hash score below cutoff. | |||||||||||
GACCCCCCAGCGTATTTGCACCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCCG.TGCGCAGCGGCTTGTTTTCACCTTGCGACAAATATCCC.GGGGT..GTGCG.GAAGCCCCCGGCGGGTCGCCTCGGCGACAGCCGAGGCGAAATACCCCCGCCGCAACGGCCGGTTCTC > NC_014034/974209‑974380
|
gACCCCCCAGCGTATTTGCACCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCCGCTGCGCAGCGGCTTGTTTTCACCTTGCGACAAATATCCC.cgggg > 2:3814296/1‑100 (MQ=255)
cAGCGTATTTGCACCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCCGCTGCGCAGCGGCTTGTTTTTACCTTTCGACCAATATCCC.gggggtccgggg > 2:303967/1‑93 (MQ=255)
aGCGTATTTGCACCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCCGCTGCGCAGCGGCTTGTTTTCACCCTGCGACCAATATTCC.ggggggccggggg > 2:1871592/1‑92 (MQ=255)
ttttCACCTTGCGACAAATATCCCGGGGGTCCGGGGGCGGAGCCCCCGGCGGGGGGGCTCCGCGGCAGCCCCCGCGGAAAAACCCCGCCGCGCCGGcccgg > 2:3806309/1‑98 (MQ=0)
cACCTTGCGACAAATATCCCGGGGGTCCGGGGGCGGAGCCCCCGGCGGGGCGCCTCGGCGGCAGCCGAGGCGAGAAAACCCGGCCGCCACGGCCGGGtctc > 1:1790088/1‑101 (MQ=9)
|
GACCCCCCAGCGTATTTGCACCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCCG.TGCGCAGCGGCTTGTTTTCACCTTGCGACAAATATCCC.GGGGT..GTGCG.GAAGCCCCCGGCGGGTCGCCTCGGCGACAGCCGAGGCGAAATACCCCCGCCGCAACGGCCGGTTCTC > NC_014034/974209‑974380
Base quality scores:
ATCG
< 3 ≤
ATCG
< 15 ≤
ATCG
< 26 ≤
ATCG
< 34 ≤
ATCG
< 41 ≤
ATCG
|