BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	= 471654	231 (1.020)	2 (0.010)	2/190	37.8	0.01	coding (1126/1521 nt)	RCAP_rcc00441	sensor histidine kinase/response regulator receiver protein
*	?	NC_014034	2925029 =	222 (0.930)	2 (0.010)	2/190	37.8	0.01	coding (2369/2556 nt)	RCAP_rcc02735	virulence‑associated protein E
Rejected: Position hash score below cutoff.

Only 100 of 251 total aligned reads displayed.


TGTGCCGCCTCCGCACCGGCGATGCCCAGAAGCGCTTCGAACACCGCCTCGTCGACGATCGGCGGGCAGGGCCGGTGGCCCTCGCCATCATGCCGTTCCAGCGCCTGGGTGATCGCCTCGGCCAGCGGTTCGATCGCCGTCATCGGCTTCGAGACGATCGCATCCGCCCCGGCGGCGACGATCGCCTCGCGGTTGGCGC  >  NC_014034/471554‑471752


tgtgCCGCCTCCGCACCGGCGATGCCCAGAAGCGCTTCGAACACCGCCTCGTCGACGATCGGCGGAGAAGGCCGGGGGGCCCCTCCATGTTGCCGCTTCAg                                                                                                    >  1:1054283/1‑101 (MQ=255)


 gtgCCGCCTCCGCACCGGCGATGCCCAGAAGCGCTTCGAACACCGCCTCGTCGACGATCGGCGGGCAGGGCCGGTGGCCCTCGCCATCATGCCGTTCCAgc                                                                                                   <  2:1713465/101‑1 (MQ=255)


  tgCCGCCTCCGCACCGGCGATGCCCAGAAGCGCGTCGAACACCGCCTCGTCGACGATCGGCGGGCAGGGCCGGTGGCCCTCGCCATCATGCCGTTCCAgcg                                                                                                  <  1:4014719/101‑1 (MQ=255)


   gccgccTCCGCACCGGCGATGCCCAGAAGCGCTTCGAACACCGCCTCGTCGACGATCGGCGGGCAGGGCCGGGGGCCCCCGCCATCATGCCGTTCCAgcgc                                                                                                 >  1:3322916/1‑101 (MQ=255)


     cgccTCCGCACCGGCGATGCCCAGAAGCGCTTCGAACACCGCCTCGTCGACGATCGGCGGGCAGGGCCGGTGGCCCTCGCCATCATGCCGTTCCAGCGCCt                                                                                               <  1:228158/101‑1 (MQ=255)


      gccTCCGCACCGGCGATGCCCAGAAGCGCTTCGAACACCGCCTCGTCGACGATCGGCGGGCAGGGCCGGTGGCCCTCGCCATCATGCCGTTCCAGCGCCTg                                                                                              <  2:2528999/101‑1 (MQ=255)


      gccTCCGCACCGGCGATGCCCAGAAGCGCTTCGAACACCGCCTCGTCGACGATCGGCGGGAAGGGGCGGTGGCCCTCCCCCACAAGCCGATCCAGCGcccg                                                                                              >  2:4368355/1‑99 (MQ=255)


      cccTCCGCACCGGCGATGCCCAGAAGCGCTTCGAACACCGCCTCGTCGACGATCGGCGGGCAGGGCCGGTGGCCCTCGCCATCATGCCGTTCCAGCGCCTg                                                                                              <  1:1215445/100‑1 (MQ=255)


       ccTCCGCACCGGCGATGCCCAGAAGCGCTTCGAACACCGCCTCGTCGACGATCGGCGGGCAGGGCCGGTGGCCCTCGCCATCATGCCGTTCCAGCGCCTgg                                                                                             <  2:1789638/101‑1 (MQ=255)


         tCCGCACCGGCGATGCCCAGAAGCGCTTCGAACACCGCCTCGTCGACGATCGGCGGGCAGGGCCGGTGGCCCTCGCCATCATGCCGTTCCAGCGCCTGGGt                                                                                           <  1:167301/101‑1 (MQ=255)


          ccGCACCGGCGATGCCCAGAAGCGCTTCGAACACCGCCTCGTCGACGATCGGCGGGCAGGGGCGGTGGCCCTCGCCATCATGCCGTTCCAGCGCCTGGGTg                                                                                          >  1:799447/1‑101 (MQ=255)


           cGCACCGGCGATGCCCAGAAGCGCTTCGAACACCGCCTCGTCGACGATCGGCGGGCAGGGCCGGTGGCCCTCGCCATCATGCCGTTCCAGCGCCTGGGTGa                                                                                         <  1:4478285/101‑1 (MQ=255)


           cGCACCGGCGATGCCCAGAAGCGCTTCGAACACCGCCTCGTCGACGATCGGCGGGCAGGGCCGGGGGCCCTCGCCATCATGCCGTTCCAGCGCCTGGGGGa                                                                                         >  1:4549280/1‑101 (MQ=255)


             cACCGGCGATGCCCAGAAGCGCTTCGAACACCGCCTCGTCGACGATCGGCGGGCAGGGCCGGTGGGCCCCCCCATCATGCCGTTCCAGCGCCCGGGGGATc                                                                                       >  2:1365919/1‑101 (MQ=255)


             cACCGGCGATGCCCAGAAGCGCTTCGAACACCGCCTCGTCGACGATCGGCGGGCAGGGCCGGTGGCCCTCGCCATCATGCCGTTCCAGCGCCTGGGTGATc                                                                                       <  2:3595121/101‑1 (MQ=255)


              aCCGGCGATGCCCAGAAGCGCTTCGAACACCGCCTCGTCGACGATCGGCGGGCAGGGCCGGTGGCCCTCTCCATCATGCCGTTCCAGCGCCTGGGTGATCg                                                                                      <  1:4168710/101‑1 (MQ=255)


              aCCGGCGATGCCCAGAAGCGCTTCGAACACCGCCTCGTCGACGATCGGCGGGCAGGGCCGGTGGCCCTCGCCATCATGCCGTTCCAGCGCCTGGGTGATCg                                                                                      <  1:220970/101‑1 (MQ=255)


              aCCGGCGATGCCCAGAAGCGCTTCGAACACCGCCTCGTCGACGATCGGCGGGCAGGGCCGGTGGCCCTCGCCATCATGCCGTTCCAGCGCCTGGGTGATCg                                                                                      <  1:645721/101‑1 (MQ=255)


              aCCGGCGATGCCCAGAAGCGCTTCGAACACCGCCTCGTCGACGATCGGCGGGCAGGGCCGGGGGCCCTCGCCATCATGCCGTTCCAGCGCCTGGGGGATcc                                                                                      >  1:2794056/1‑100 (MQ=255)


                cGGCGATGCCCAGAAGCGCTTCGAACACCGCCTCGTCGACGATCGGCGGGCAGGGCCGGGGGCCCTCGCCATCATGCCGTTCCAGCGCCTGGGGGATCGcc                                                                                    >  1:2585861/1‑101 (MQ=255)


                  gCGATGCCCAGAAGCGCTTCGAACACCGCCTCGTCGACGATCTGCGGGCAGGGCCGGTGGCCCTCGCCATCATGCCGTTCCAGCGCCTGGGTGATCGCCTc                                                                                  <  1:895320/101‑1 (MQ=255)


                  gCGATGCCCAGAAGCGCTTCGAACACCGCCTCGTCGACGATCGGCGGGCAGGGCCGGTGGCCCTCGCCATCATGCCGTTCCAGCGCCTGGGTGATCGCCTc                                                                                  <  2:3059235/101‑1 (MQ=255)


                  gCGATGCCCAGAAGCGCTTCGAACACCGCCTCGTCGACGATCGGCGGGCAGGGCCGGTGGCCCTCGCCATCATGCCGTTCCAGCGCCTGGGGGATCGCCTc                                                                                  >  2:3343028/1‑101 (MQ=255)


                  gCGATGCCCAGAAGCGCTTCGAACACCGCCTCGTCGACGATCGGCGGGCAGGGCCGGGGGCCCCCGCCATCCTGCCGTTCCGGCGCCTGGGGGCACGCCTc                                                                                  >  1:2735416/1‑101 (MQ=255)


                    gATGCCCAGAAGCGCTTCGAACACCGCCTCGTCGACGATCGGCGGGCAGGGCCGGGGGCCCTCGCCATCATGCCGTTCCAGCGCCTGGGGGATCGcccccg                                                                                >  1:1599532/1‑97 (MQ=255)


                     aTGCCCAGAAGCGCTTCGAACCCCGCCTCGTCGACGATCGGCGGGCAGGGCCGGTGGCCCTCGCCATCATGCCGTTCCAGCGCCTGGGTGATCGCCTCGGc                                                                               <  1:534168/101‑1 (MQ=255)


                     aTGCCCAGAAGCGCTTCGAACACCGCCTCGTCGACGATCGGCGGGCAGGGCCGGTGGCCCTCGCCATCATGCCGTTCCAGCGCCTGGGTGATCGCCTCGGc                                                                               <  1:983505/101‑1 (MQ=255)


                     aTGCCCAGAAGCGCTTCGAACACCGCCTCGTCGACGATCGGCGGGCAGGGCCGGTGGCCCTCGCCATCATGCCGTTCCAGCGCCTGGGTGATCGCCTCGGc                                                                               <  1:2899841/101‑1 (MQ=255)


                     aTGCCCAGAAGCGCTTCGAACACCGCCTCGTCGACGATCGGCGGGCAGGGCCGGTGGCCCTCGCCATCATGCCGTTCCAGCGCCTGGGGGATCGCCCCGGc                                                                               >  1:2410013/1‑101 (MQ=255)


                     aTGCCCAGAAGCGCTTCGAACACCGCCTCGTCGACGATCGGCGGGAAGGGCCGGTGGCCCTCGCCCTCATGACGTTCCAGCGCCTGGGTGATCGCCTCGGc                                                                               >  1:3821097/1‑101 (MQ=255)


                      tGCCCAGAAGCGCTTCGAACACCGCCTCGTCGAAGATCGGCGGGCAGGGCCGGTGGCCCTCGCCATCATGCCGTTCCAGCGCCTGGGTGATCGCCTCGGcc                                                                              <  1:4037408/101‑1 (MQ=255)


                       gCCCAGAAGCGCTTCGAACACCGCCTCGTCGACGATCGGCGGGCAGGGCCGGTGGCCCTCGCCATCATGCCGTTCCAGCGCCTGGGTGATCGCCTCGGCCa                                                                             <  1:1956579/101‑1 (MQ=255)


                       gCCCAGAAGCGCTTCGAACACCGCCTCGTCGACGATCGGCGGGCAGGGCCGGTGGCCCTCGCCATCATGCCGTTCCAGCGCCTGGGTGATCGCCTCGGCCa                                                                             <  1:1306038/101‑1 (MQ=255)


                       gCCCAGAAGCGCTTCGAACACCGCCTCGTCGACGATCGGCGGGCAGGGCCGGTGGCCCTCGCCATCATGCCGTTCCAGCGCCTGGGGGATCGCCCCGGCCa                                                                             >  2:39952/1‑101 (MQ=255)


                         ccAGAAGCGCTTCGAACACCGCCTCGTCGACGATCGGCGGGCAGGGCCGGTGGCCCTCGCCATCATGCCGTTCCAGCGCCTGGGTGATCGCCTCAGCCAGc                                                                           >  1:742751/1‑101 (MQ=255)


                           aGAAGCGCTTCGAACACCGCCTCGTCGACGATCGGCGGGCAGGGCCGGTGGCCCTCGCCATCATGCCGTTCCAGCGCCTGGGGGATCGCCTCGGCCCGCgg                                                                         >  1:317994/1‑101 (MQ=255)


                            gAAGCGCTTCGAACCCCGCCTCGTCGACGATCGGCGGGCAGGGCCGGTGGCCCTCGCCATCATGCCGTTCCAGCGCCTGGGTGATCGCCTCGGCCAGCGGt                                                                        <  1:3223911/101‑1 (MQ=255)


                              aGCGCTTCGAACACCGCCTCGTCGACGATCGGCGGGCAGGGCCGGTGGCCCTCGCCATCATGCCGTTCCAGCGCCTGGGTGATCGCCTCGGCCAGCGGTTc                                                                      <  2:2361724/101‑1 (MQ=255)


                               gcgcTTCGAACACCGCCTCGTCGACGATCGGCGGGCAGGGCCGGTGGCCCTCGCCATCATGCCGTTCCAGCGCCTGGGTGATCGCCTCGGCCAGCGGTTCg                                                                     <  2:3712122/101‑1 (MQ=255)


                               gcgcTTCGAACACCGCCTCGTCGACGATCGGCGGGCAGGGCCGGGGGCCCTCGCCATCATGCCGTTCCGGCGCCTGGGTGATCGCCCCGGCCAGCGGTTCg                                                                     >  1:3665973/1‑101 (MQ=255)


                               gcgcTTCGAACACCGCCTCGTCGACGATCGGCGGGCAGGGCCGGGGGCCCCCGCCATCATGCCGTTCCAGGGCCCGGGGGATCGCCTCGGCCCGCGGGTCg                                                                     >  1:1154765/1‑101 (MQ=255)


                                 gcTTCGAACACCGCCTCGTCGACGATCGGCGGGGAGGGCCGGTGGCCCTCGCCATCATGCCGTTCCAGCGCCTGGGGGATTGCCTCGGCCAGCGGTTCGAt                                                                   >  1:4412589/1‑101 (MQ=255)


                                  cTTCGAACACCGCCTCGTCGACGATCGGCGGGCAGGGCCGGTGGCCCTCGCCATCATGCCGTTCCAGCGCCTGGGTGATCGCCTCGGCCAGCGGTTCGATc                                                                  <  2:646221/101‑1 (MQ=255)


                                   ttCGAACACCGCCTCGTCGACGATCGGCGGGCAGGGCCGGTGGCCCTCGCCATCATGCCGTTCCAGCGCCTGGGTGATCGCCTCGGCCAGCGGTTCGATCg                                                                 >  2:4127398/1‑101 (MQ=255)


                                    tCGAACCCCGCCTCGGCGACGATCGGCGGGCAGGGCCGGTGGCCCTCGCCATCATGCCGTTCCAGCGCCTGGGTGATCGCCTCGGCCAGCGGTTCGATCGc                                                                <  2:1702155/101‑1 (MQ=255)


                                    tCGAACACCGCCTCGTCGACGATCGGCGGGCAGGGCCGGGGGCCCTCGCCATCATGCCGTTCCAGCGCCTGGGTGATCGCCTCGGCCAGCGGTTCGATCGc                                                                >  1:1337599/1‑101 (MQ=255)


                                     cGAACACCGCCTCGTCGACGATCGGCGGGCAGGGCCGGTGGCCCTCGCCATCATGCCGTTCCAGCGCCTGGGTGATCGCCTCGGCCAGCGGGTCGATCGcc                                                               >  2:1248007/1‑101 (MQ=255)


                                      gAACACCGCCTCGTCGACGATCGGCGGGCAGGGGCGGGGGCCCTCCCCATCATCCCGATCCAGCGCCTGGGTGCTCCCCTCGGCCCGCGGGTCGATCCCCg                                                              >  1:588935/1‑101 (MQ=255)


                                        acacCGCCTCGTCGACGATCGGCGGGCAGGGCCGGTGGCCCTCGCCATCATGCCGTTCCAGCGCCTGGGTGATCGCCTCGGCCAGCGGTTCGATCGCCGTc                                                            <  1:1710469/101‑1 (MQ=255)


                                         cacCGCCTCGTCGACGATCGGCGGGCAGGGCCGGTGGCCCTCGCCATCATGCCGTTCCAGCGCCTGGGTGATCGCCTCGGCCAGCGGTTGGATCGCCGTCa                                                           >  2:2115629/1‑101 (MQ=255)


                                         cacCGCCTCGTCGACGATCGGCGGGCAGGGCCGGGGGCCCTCGCCATCATGCCGGTCCAGCGCCCGGGGGATTGCCTCGGCCAGCGGGTCGATCGGCGtgc                                                           >  1:1026816/1‑99 (MQ=255)


                                         cacCGCCTCGTCGACGATCGGCGGGCAGGGCCGGAGGCCCTCGCCATCATGCCATTCCAGGGGCTGGGTGATCTCCTCAGCCCGCGGTTGGAAAGCCGTcc                                                           >  2:2302784/1‑100 (MQ=255)


                                          acCGCCTCGTCGACGATCGGCGGGCAGGGCCGGTGGCCCTCGCCATCATGCCGTTCCAGCGCCTGGGTGATCGCCTCGGCCAGCGGTTCGATCGCCGTCAt                                                          <  1:2343825/101‑1 (MQ=255)


                                           ccGCCTCGTGGACGAGCGGCGGGCAGGGCCGGTGGCCCTCGCCATCATGCCGTTCCAGCGCCTGGGTGATCGCCTCGGCCAGCGGTTCGATCGCCGTCATc                                                         <  2:2026954/101‑1 (MQ=255)


                                           ccGCCTCGTCGACGATCGGCGGGCAGGGCCGGTGGCCCTCGCCATCATGCCGTTCCAGCGCCTGGGTGATCGCCTCGGCCAGCGGTTCGATCGCCGTCATc                                                         <  1:1517636/101‑1 (MQ=255)


                                           ccGCCTCGTCGACGATCGGCGGGCAGGGCCGGTGGCCCTCGCCATCATGCCGTTCCAGCGCCTGGGTGATCGCCTCGGCCAGCGGTTCGATCCCCGTCATc                                                         >  2:2370927/1‑101 (MQ=255)


                                             gCCTCGTCGACGATCGGCGGGCAGGGCCGGTGGCCCTCGCCATCATGCCGTTCCAGCGCCTGGGTGATCGCCTCGGCCAGCGGTTCGATCGCCGTCATCgg                                                       <  1:2001591/101‑1 (MQ=255)


                                                tcgtcgACGATCGGCGGGCAGGGCCGGTGGCCCTCGCCATCATGCCGTTCCAGCGCCTGGGTGATCGCCTCGGCCAGCGGTTCGATCGCCGTCATCGGCtt                                                    <  1:2931351/101‑1 (MQ=255)


                                                  gtccACGATCGGCGGGCAGGGCCGGTGGCCCTCGCCATCATGCCGTTCCAGCGCCTGGGGGATCGCCTCGGCCAGCGGTTCGATCGCCGTCATCgggctcg                                                  >  2:44345/1‑96 (MQ=255)


                                                   tcgACGATCGGCGGGCAGGGCCGGTGGCCCTCGCCATCATGCCGTTCCAGCGCCTGGGTGATCGCCTCGGCCAGCGGTTCGATCGCCGTCATCGGCTTCga                                                 <  2:144469/101‑1 (MQ=255)


                                                   tcgACGATCGGCGGGCAGGGCCGGTGGCCCTCGCCATCATGCCGTTCCAGCGCCTGGGTGATCGCCTCGGCCAGCGGTTCGATCGCCGTCATCGGCTTCga                                                 <  2:407335/101‑1 (MQ=255)


                                                    cgacgaTCGGCGGGCAGGGCCGGTGGCCCTCGCCATCATGCCGTTCCAGCGCCTGGGTGATCGCCTCGGCCAGCGGTTCGATCGCCGTCCTCGGGTTCgag                                                >  2:2427137/1‑101 (MQ=255)


                                                    cgacgaTCGGCGGGCAGGGCCGGTGGCCCTCGCCATCATGCCGTTCCAGCGCCTGGGTGATCGCCTCGGCCAGCGGTTCGATCGCCGTCATCGGCTTCgag                                                <  1:3477060/101‑1 (MQ=255)


                                                     gacgaTCGGCGGGCAGGGCCGGTGGCCCTCGCCATCATGCCGTTCCAGCGCCTGGGTGATCGCCTCGGCCAGCGGTTCGATCGCCGTCATCGGGTTCgagg                                               >  2:1612614/1‑100 (MQ=255)


                                                     gacgaTCGGCGGGCAGGGCCGGTGGCCCTCGCCATCATGCCGTTCCAGCGCCTGGGTGATCGCCTCGGCCAGCGGTTCGATCGCCGTCATCGGCtttggga                                               >  2:2927198/1‑96 (MQ=255)


                                                      acgaTCGGCGGGCAGGGCCGGTGGCCCTCGCCATCATGCCGTTCCAGCGCCTGGGTGATCGCCTCGGCCAGCGGTTCGATCGCCGTCATCGGCTTCGAGAc                                              <  2:2409851/101‑1 (MQ=255)


                                                      acgaTCGGCGGGCAGGGCCGGTGGCCCTCGCCATCATGCCGTTCCAGCGCCTGGGGGATCGCCTCGGCCAGCGGTTCGATCGCCGTCATCGGCTTCgggaa                                              >  1:4353841/1‑100 (MQ=255)


                                                          tCGGCGGGCAGGGCCGGTGGCCCTCGCCATCATGCCGTTCCAGCGCCTGGGTGATCGCCTCGGCCAGCGGTTCGATCGCCGTCATCGGCTTCGAGACGATc                                          <  2:1943190/101‑1 (MQ=255)


                                                            ggcggGCAGGGCCGGTGGCCCTCGCCATCATGCCGTTCCAGCGCCTGGGTGATCGCCTCGGCCAGCGGTTCGATCGCCGTCATCGGCTTCGAGACGATCGc                                        <  2:4584299/101‑1 (MQ=255)


                                                              cggGCAGGGCCGGTGGCCCTCGCCATCATGCCGTTCCAGCGCCTGGGTGATCGCCTCGGCCAGCGGTTCGATCGCCGTCATCGGCTTCGAGACGATCGCAt                                      <  2:4187600/101‑1 (MQ=255)


                                                              cggGCAGGGCCGGTGGCCCTCGCCATCATGCCGTTCCAGCGCCTGGGTGATCGCCTCGGCCAGCGGTTCGATCGCCGTCATCGGCTTCGAGACGATCGCAt                                      <  2:2585687/101‑1 (MQ=255)


                                                                ggcgcggCCGGTGGCCATGCCCATCATGCCGTTCCAGCGCGTGGGTGATCGCCTCGGCCAGCGGTTCGATCGCCGTCATCGGCTTCGAGACGATCGCATcc                                    <  2:317048/96‑1 (MQ=255)


                                                                ggCAGGGCGGGTGGCCGTTCCTGTCATACCGTTCAAGCGCCTGGGTGATCGCCTAGTCCAGCGGTTCGATCGCCGTCATCGGCTTCGAGACGATCGCATcc                                    <  2:4603073/101‑1 (MQ=255)


                                                                ggCAGGGCCGGTGGCCCTCGCCATCATGCCGTTCCAGCGCCTGGGTGATCGCCTCGGCCAGCGGTTCGATCGCCGTCATCGGCTTCGAGACGATCGCATcc                                    <  2:3283266/101‑1 (MQ=255)


                                                                ggCAGGGCCGGTGGCCCTCGCCATCATGCCGTTCCAGCGCCTGGGTGATCGCCTCGGCCAGCGGTTCGATCGCCGTCATCGGCTTCGAGACGATCGCATcc                                    <  2:1530478/101‑1 (MQ=255)


                                                                  cAGGGCCGGTGGCCCTCGCCATCATGCCGTTCCAGCGCCTGGGTGATCGCCTCGGCCAGCGGTTCGATCGCCGTCATCGGCTTCGAGACGATCGCATCCGc                                  <  1:138941/101‑1 (MQ=255)


                                                                    gggCCGGTGGCCCTCGCCATCATGCCGTTCCAGCGCCTGGGTGATCGCCTCGGCCAGCGGTTCGATCGCCGTCATCGGCTTCGAGACGATCGCATCCGccc                                >  1:113944/1‑101 (MQ=255)


                                                                    gggCCGGTGGCCCTCGCCATCATGCCGTTCCAGCGCCTGGGTGATCGCCTCGGCCAGCGGTTCGATCGCCGTCATCGGCTTCGAGACGATCGCATCCGccc                                >  1:4603804/1‑101 (MQ=255)


                                                                    gggCCGGTGGCCCTCGCCATCATGCCGTTCCAGCGCCTGGGTGATCGCCTCGCCCAGCGGCTCGATCGCCGCCATCGGGTTCTGGTCGATAGCATCCCccc                                >  2:2121965/1‑101 (MQ=255)


                                                                        cGGTGGCCCTCGCCATCATGCCGTTCCAGCGCCTGGGTGATTGCCTCGGCCAGCGGTTCGATCGCCCTCATCGGCTTCCAGACCCTCGCACCCACCCcggg                            >  2:3155246/1‑100 (MQ=255)


                                                                          gTGGCCCTCGCCATCATGCCGTTCCAGCGCCTGGGTGATCGCCTCGGCCAGCGGTTCGATCGCCGTCATCGGCTTCGAGACGATCGCATCCGCCCcggcgg                          >  2:846736/1‑101 (MQ=255)


                                                                           tGGCCCTCGCCATCATGCCGTTCCAGCGCCTGGGTGATCGCCTCGGCCAGCGGTTCGATCGCCGTCATCGGCTTCGAGACGATCGCATCCGCCCCggcggc                         <  2:1869062/101‑1 (MQ=255)


                                                                            ggCCCTCGCCATCATGCCGTTCCAGCGCCTGGGTGATCGCCTCGGCCAGCGGTTCGATCGCCGTCATCGGCTTCGAGACGATCGCATCCGCCCcggcgggg                        >  2:3610150/1‑99 (MQ=255)


                                                                               ccTCGCCATCATGCCGTTCCAGCGCCTGGGTGATCGCCTCGGCCAGCGGTTCGATCGCCGTCATCGGCTTCGAGACGATCGCATCCGCCCCGGCGGcgacg                     <  2:2793840/101‑1 (MQ=255)


                                                                               ccTCGCCATCATGCCGTTCCAGCGCCTGGGTGATCGCCTCGGCCAGCGGTTCGATCGCCGTCATCGGCTTCGAGACGATCGCATCCGCCCCGGCGGcgacg                     <  2:4413891/101‑1 (MQ=255)


                                                                                 tggCCATCATGCCGTTCCAGCGCCTGGGTGATCGCCCCGGCCAGCGGTTCGATCGCCGTCATCGGCTTCGAGACGATCGCATCCGCCCCGGCGGCGACGAt                   <  1:1254503/99‑1 (MQ=255)


                                                                                  cGCCATCATGCCGTTCCAGCGCCTGGGTGATCGCCTCGGCCAGCGGTTCGATCGCCGTCATCGGCTTCGAGACGATCGCATCCGCCCCGGCGGCGACGATc                  <  2:4522087/101‑1 (MQ=255)


                                                                                  cGCCATCATGCCGTTCCAGCGCCTGGGTGATCGCCTCGGCCAGCGGTTCGATCGCCGTCATCGGCTTCGAGACGATCGCATCCGCCCCGGCGGCGACGATc                  <  1:3952537/101‑1 (MQ=255)


                                                                                  cGCCATCATGCCGTTCCAGCGCCTGGGTGATCGCCTCGGCCAGCGGTTCGATCGCCGTCATCGGCTTCGAGACGATCGCATCCGCCCCGGCGGCGACGATc                  <  1:3516598/101‑1 (MQ=255)


                                                                                   gCCATCATGCCGTTCCAGCGCCTGGGTGATCGCCTCGGCCAGCGGTTCGATCGCCGTCATCGGCTTCGAGACGATCGCATCCGCCCCGGCGGCGACGATCg                 <  2:2567474/101‑1 (MQ=255)


                                                                                    ccATCATGCCGTTCCAGCGCCTGGGTGATCGCCTCGGCCAGCGGTTCGATCGCCGTCATCGGCTTCGAGACGATCGCATCCGCCCCGGCGGCGACGATCGc                <  1:1366014/101‑1 (MQ=255)


                                                                                    ccATCATGCCGTTCCAGCGCCTGGGTGATCGCCTCGGCCAGCGGTTCGATCGCCGTCATCGGCTTCGAGACGATCGCATCCGCCCCGGCGGCGACGATCGc                >  2:3512090/1‑101 (MQ=255)


                                                                                          tGCCGTTCCAGCGCCTGGGTGATCGCCTCGGCCAGCGGTTCGATCGCCGTCATCGGCTTCGAGACGATCGCATCCGCCCCGGCGGCGACGATCGCCTcgcg          <  2:2735218/101‑1 (MQ=255)


                                                                                            ccGTTCCAGCGCCTGGGTGATCGCCTCGGCCAGCGGTTCGATCGCCGTCATCGGCTTCGAGACGATCGCATCCGCCCCGCCGGCGACGATCGCCTCGCGGt        <  1:2649635/101‑1 (MQ=255)


                                                                                             cGTTCCAGCGCCTGGGTGATCGCCTCGGCCAGCGGTTCGATCGCCGTCATCGGCTTCGAGACGATCGCATCCGCCCCGGCGGCGACGATCGCCTCGCGGtt       <  1:4470345/101‑1 (MQ=255)


                                                                                              gTTCCAGCGCCTGGGTGATCGCCTCGGCCATCGGTTCGATCGCCGTCATCGGCTTCGAGACGATCGCATCCGCCCCGGCGGCGACGATCGCCTCGCGGTTg      >  1:4099649/1‑101 (MQ=255)


                                                                                              gTTCCAGCGCCTGGGTGATCGCCTCGGCCAGCGGTTCGATCGCCGTCATCGGCTTCGAGACGATCGCATCCGCCCCGGCGGCGACGATCGCCTCGCGGTTg      <  2:3820812/101‑1 (MQ=255)


                                                                                               ttCCAGCGCCTGGGTGATCGCCTCGGCCAGCGGTTCGATCGCCGTCATCGGCTTCGAGACGATCGCATCCGCCCCGGCGGCGACGATCGCCTCGCGGTTgg     <  2:4634164/101‑1 (MQ=255)


                                                                                                 ccAGCGCCTGGGTGATCGCCTCGGCCAGCGGTTCGATCGCCGTCATCGGCTTCGAGACGATCGCATCCGCCCCGGCGGCGAGGATCGCCTCGCGGCTGgcg   >  2:1097759/1‑101 (MQ=255)


                                                                                                 ccAGCGCCTGGGTGATCGCCTCGGCCAGCGGTTCGATCGCCGTCATCGGCTTCGAGACGATCGCATCCGCCCCGGCGGCGACGATCGCCTCGCGGTTGgcg   >  2:793051/1‑101 (MQ=255)


TGTGCCGCCTCCGCACCGGCGATGCCCAGAAGCGCTTCGAACACCGCCTCGTCGACGATCGGCGGGCAGGGCCGGTGGCCCTCGCCATCATGCCGTTCCAGCGCCTGGGTGATCGCCTCGGCCAGCGGTTCGATCGCCGTCATCGGCTTCGAGACGATCGCATCCGCCCCGGCGGCGACGATCGCCTCGCGGTTGGCGC  >  NC_014034/471554‑471752

Base quality scores:


ATCG

< 3 ≤


ATCG

< 15 ≤


ATCG

< 24 ≤


ATCG

< 33 ≤


ATCG

< 40 ≤


ATCG