BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	1303934 =	93 (0.410)	57 (0.250)	31/190	18.1	0.28	intergenic (+121/+36)	urtE/RCAP_rcc01231	urea ABC transporter ATP‑binding protein UrtE/UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase
*	?	NC_014034	3003970 =	200 (0.840)	57 (0.250)	31/190	18.1	0.28	intergenic (+16/+160)	gfo/lrp	glucose‑‑fructose oxidoreductase/leucine‑responsive regulatory protein
Rejected: Position hash score below cutoff.

Only 100 of 107 total aligned reads displayed.


TGGGGCAAGATAAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCC....GCCAAGATGGGG..G..G.C.CCCCCTTTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAGCCCGCCCGCATCAGGGTCTTGCGCACCGGCTTGAACGCATAAAGCGCGC  >  NC_014034/1303858‑1304034


tGGGGCAAGATAAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTT.CGgggcggg                                                                                     <  1:2480518/101‑1 (MQ=14)


tGGGGCAAGATAAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTT.CGgggcggg                                                                                     >  2:169142/1‑101 (MQ=14)


 ggggCAAGATAAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTT.CGgggcgggc                                                                                    <  2:1302747/101‑1 (MQ=14)


  gggCAAGATAAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTT.CGGGGCgggcc                                                                                   >  2:4068038/1‑101 (MQ=14)


     cAAGATAACCCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTT.CGGGGCgggccgca                                                                                <  1:2988281/101‑1 (MQ=9)


      aaGATAACCCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTT.CGGGGCgggccgcag                                                                               <  2:324371/101‑1 (MQ=9)


      aaGATAAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTT.CGGGGCgggccgcag                                                                               >  1:3519800/1‑101 (MQ=14)


      aaGATAAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGGGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTT.CGGGGCgggccgcag                                                                               >  1:3361931/1‑101 (MQ=9)


       aGATAAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTT.CGGGGCgggccgcagg                                                                              >  1:4163937/1‑101 (MQ=14)


       aGATAAACCCCATCCTTTCACCTTGCCGCAAATACCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTT.CGGGGCgggccgcagg                                                                              <  2:2228843/101‑1 (MQ=9)


        gATAAACCCCATCCTTTCCCCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTT.CGGGGCgggccgcaggg                                                                             <  1:696988/101‑1 (MQ=9)


        gATAAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCCG.CGCCCCCTTTT.CGGGGCgggccgccagg                                                                             >  2:2901542/1‑97 (MQ=9)


         aTAAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGGGAATTGGCCGAAGGCCAGGAGGGGG..GCAG.CGCCCCCTTTT.AGGGGCgggccgcagggc                                                                            >  1:1387025/1‑101 (MQ=9)


          tAAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTT.CGGGGCgggccgcagggcc                                                                           <  2:3334533/101‑1 (MQ=14)


          tAAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTT.CGGGGCgggccgcagggcc                                                                           >  1:3835737/1‑101 (MQ=14)


           aagccctgtCCTTTCGCCTTGCCGCAAAGGTTCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTT.CGGGGCgggccgcagggccg                                                                          <  1:2545422/93‑1 (MQ=2)


           aaaCCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTT.CGGGGCgggccgcagggccg                                                                          >  2:235268/1‑101 (MQ=14)


           aaaCCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTT.CGGGGCgggccgcagggccg                                                                          >  2:1990618/1‑101 (MQ=14)


            aaCCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTT.CGGGGCgggccgcagggccgc                                                                         >  1:951809/1‑101 (MQ=14)


             aCCCCATCCTTTCTCCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTT.CGGGGCgggccgcagggccgca                                                                        <  1:2532924/101‑1 (MQ=9)


              ccccATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTT.CGGGGCGGGCCGCAGGGCCGCAc                                                                       <  2:211985/101‑1 (MQ=14)


              ccccATCCTTTCACCTTGCCGCAAATATCCCGGGGGGGGAATTGGCCGAAGGCCAAGAGGGGGTCA..G.CGCGCCCTTTT.CGGGGCGGGCCGCAGGGCCGCAc                                                                       >  2:2830202/1‑101 (MQ=9)


              ccccATCCTTTCACCTTGCCGCAAATATCCCGGGGGGGGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGGACCCTTTT.CGGGGCGGGCCGCAGGGCCGCAc                                                                       >  1:3428062/1‑101 (MQ=9)


               cccATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTT.CGGGGCGGGCCGCAGGGCCGCAcc                                                                      >  2:4394458/1‑101 (MQ=14)


                ccATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTT.CGGGGCGGGCCGCAGGGCCGCAccc                                                                     >  2:468793/1‑101 (MQ=14)


                 cATCCTTTCACCTTGCCGCAAATCTCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTT.CGGGGCGGGCCGCAGGGCCGCACCCt                                                                    <  1:1934072/101‑1 (MQ=9)


                 cATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTT.CGGGGCGGGCCGCAGGGCCGCACCCt                                                                    <  1:681799/101‑1 (MQ=14)


                  ctCCTTTCTCGTTGCGGTATATATCCTGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGT..GCAG.CGCCCCCTTTT.CGGGGCGGGCCGCAGGGCCGCCCCCTg                                                                   <  2:4553359/100‑1 (MQ=2)


                    ccTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTc                                                                 >  2:2763581/1‑101 (MQ=14)


                    ccTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTc                                                                 >  1:244201/1‑101 (MQ=14)


                     cTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCa                                                                >  2:3139949/1‑101 (MQ=14)


                     cTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCa                                                                <  2:3417652/101‑1 (MQ=14)


                      tttCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAg                                                               >  1:1922202/1‑101 (MQ=14)


                      tttCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAg                                                               <  2:3606259/101‑1 (MQ=14)


                       ttCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAgc                                                              >  1:3545773/1‑101 (MQ=14)


                        tccccTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAgcg                                                             <  1:2659521/98‑1 (MQ=9)


                        tCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAgcg                                                             <  1:672721/101‑1 (MQ=14)


                        tCACCTAGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTT.CGGGGCGGGGCGCAGGGCCGCACCCGGTCAgcg                                                             >  2:1984083/1‑101 (MQ=9)


                         cACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAgcgc                                                            >  2:2595452/1‑101 (MQ=17)


                         cACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAgcgc                                                            >  1:4546583/1‑101 (MQ=17)


                          aCCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTT.CGGGGCGGGGCGCAGGGCCGGACCCTGTAAgggcc                                                           >  2:1834988/1‑100 (MQ=2)


                           ccTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCAt                                                          <  2:2129937/101‑1 (MQ=17)


                           ccTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCAt                                                          >  2:138254/1‑101 (MQ=17)


                           ccTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCAt                                                          <  1:2833865/101‑1 (MQ=17)


                           ccTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCAt                                                          <  1:1950939/101‑1 (MQ=17)


                            cTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGACAAGAGGGGG..GCAGAG.CCCCCTTTT.CGGGGCGGGGCGCCGGGCCGCCCCCCGTCAGCGCATc                                                         >  1:1346634/1‑101 (MQ=2)


                             ttGCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCACCCTTTT.CGGGGCGGGCCACAGGGCCGCACCCTGTCAGCGCATcc                                                        >  1:3921635/1‑101 (MQ=9)


                             ttGCCGCAAATATCCCGGGGGGCGAATTGGCCGAAGGCCAAGAGGGGG..GGAG.CGCCCCCTTTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATcc                                                        >  2:3620349/1‑101 (MQ=12)


                             ttGCCGAAAATAGCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATcc                                                        <  1:2308745/101‑1 (MQ=9)


                               gCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATcccc                                                      <  2:3552468/101‑1 (MQ=17)


                               gCCGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATcccc                                                      >  1:4168821/1‑101 (MQ=17)


                                ccGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCa                                                     >  2:2137204/1‑101 (MQ=17)


                                 cGCAAATATCCGGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCaa                                                    <  1:240545/101‑1 (MQ=12)


                                 cGCAAATATCCCGGGGGTTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCaa                                                    <  2:3034055/101‑1 (MQ=12)


                                 cGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCaa                                                    >  2:1536373/1‑101 (MQ=17)


                                 cGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCaa                                                    <  1:2070820/101‑1 (MQ=17)


                                 cGCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCaa                                                    <  2:2367764/101‑1 (MQ=17)


                                 cGCAAATATCCCGGGGGGGGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTT.CGGGGCGGCACGCAGGGCCGCACCCCGTAAGGGCATCCCCaa                                                    >  2:2675182/1‑101 (MQ=2)


                                  gCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCCTCCCCAAg                                                   >  2:2919270/1‑101 (MQ=12)


                                  gCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAg                                                   >  2:4312132/1‑101 (MQ=17)


                                  gCAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAg                                                   <  1:3847456/101‑1 (MQ=17)


                                   cAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAgc                                                  >  1:611256/1‑101 (MQ=17)


                                   cAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAgc                                                  <  1:2563645/101‑1 (MQ=17)


                                   cAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAgc                                                  >  2:3592606/1‑101 (MQ=17)


                                   cAAATATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAgc                                                  >  1:2142319/1‑101 (MQ=17)


                                    aaaTATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAgcc                                                 >  1:4562583/1‑101 (MQ=17)


                                    aaaTATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAgcc                                                 >  1:2088477/1‑101 (MQ=17)


                                     aaTATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCACgccc                                                >  2:388819/1‑101 (MQ=12)


                                     aaTATCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAgccc                                                >  2:1184657/1‑101 (MQ=17)


                                      atatCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAgcccg                                               >  1:3954970/1‑101 (MQ=17)


                                        atCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAgcccgcc                                             >  2:2463653/1‑101 (MQ=18)


                                        atCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAgcccgcc                                             >  1:2169724/1‑101 (MQ=18)


                                        atCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAgcccgcc                                             >  2:1910988/1‑101 (MQ=18)


                                        atCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAgcccgcc                                             >  1:55191/1‑101 (MQ=18)


                                        atCCCGGGGGGTGAATTGGCCGAAGGCAAAGAGGGGG..GCAG.CTCCCCCTTTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAgcccgcc                                             <  2:2520446/101‑1 (MQ=16)


                                         tCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAgcccgccc                                            <  1:1331944/101‑1 (MQ=18)


                                         tCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAgcccgccc                                            <  2:2789066/101‑1 (MQ=18)


                                         tCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCAGCCCCAAggccgccc                                            >  1:662158/1‑101 (MQ=12)


                                         tCCCGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTT.CGGGGCGGGCCGCAGGCCCGCACCCTGTCAGCGCATCCCCAAgcccgccc                                            >  1:3979998/1‑101 (MQ=12)


                                           ccGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAGCccgcccgc                                          >  1:3638509/1‑101 (MQ=18)


                                            cGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAGCCCGCCCGCa                                         >  2:4137729/1‑101 (MQ=18)


                                            cGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAGCCCGCCCGCa                                         <  1:1369859/101‑1 (MQ=18)


                                            cGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAGCCCGCCCGCa                                         >  1:710613/1‑101 (MQ=18)


                                            cGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAGCCCGCCCGCa                                         >  2:2702082/1‑101 (MQ=18)


                                            cGGGGGGTGAATTGGCCGAAGGCCAAGAGGGGG..GCAG.CGCCCCCTTTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAGCCCGCCCGCa                                         <  1:1330941/101‑1 (MQ=18)


                                                                             ggggcagcgcccccTTTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAGCCCGCCCGCATCAGGGTCTTGCGCACCGGCTTGAACGCAt           <  1:3164831/92‑1 (MQ=255)


                                                                              gggcagcgcccccTTTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAGCCCGCCCGCATCAGGGTCTTGCGCACCGGCTTGAACGCATa          <  1:2966969/93‑1 (MQ=255)


                                                                               ggcagcgccccgTTTT.CGGGGGGGGCCGCAGGGCCGCACCCTGGCAGCGCATCCCCAAGCCCGCCCGCATCAGGGTCTTGCGCACCGGGTTGAACGCATaa         <  2:1084236/94‑1 (MQ=255)


                                                                               ggcagcgcccccTTTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAGCCCGCCCGCATCAGGGTCTTGCGCACCGGCTTGAACGCATaa         <  2:363532/94‑1 (MQ=255)


                                                                               gccgcc.cccccTTTTGCGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAGCCCGCCCGCATCAGGGTCTTGCGCACCGGCTTGAACGCATaa         <  2:1268123/96‑1 (MQ=255)


                                                                               gccccc.cccctTTTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAGCCCGCCCGCATCAGGGTCTTGCGCACCGGCTTGAACGCATaaa        <  2:4562284/96‑1 (MQ=255)


                                                                                gcagcgcccccTTTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAGCCCGCCCGCATCAGGGTCTTGCGCACCGGCTTGAACGCATaaa        <  2:3002466/95‑1 (MQ=255)


                                                                                 cagcgcccccTTTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAGCCCGCCCGCATCAGGGTCTTGCGCACCGGCTTGAACGCATAAAg       >  2:3808747/6‑101 (MQ=255)


                                                                                  agcgcccccTTTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAGCCCGCCCGCATCAGGGTCTTGCGCACCGGCTTGAACGCATAAAgc      >  2:2551189/5‑101 (MQ=255)


                                                                                   gcgcccccTTTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAGCCCGCCCGCATCAGGGTCTTGCGCACCGGCTTGAACGCATAAAgcg     >  1:3686316/4‑101 (MQ=255)


                                                                                    cgcccccTTTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAGCCCGCCCGCATCAGGGTCTTGCGCACCGGCTTGAACGCCTAAAgcgc    >  2:2203147/3‑101 (MQ=255)


                                                                                    cgcccccTTTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAGCCCGCCCGCATCAGGGTCTTGCGCACCGGCTTGAACGCATAAAgcgc    >  1:4547370/3‑101 (MQ=255)


                                                                                    cgcccccTTTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAGCCCGCCCGCATCAGGGTCTTGCGCACCGGCTTGAACGCATAAAgcgc    <  2:1373047/99‑1 (MQ=255)


                                                                                      cccccTTTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAGCCCGCCCGCATCAGGGTCTTGCGCACCGGCTTGAACGCATAAAgcgcgc  <  1:2860446/101‑1 (MQ=255)


                                                                                      cccccTTTC.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAGCCCGCCCGCATCAGGGTCTTGCGCACCGGCTTGAACGCATAAAgcgcgc  <  2:1659141/101‑1 (MQ=255)


TGGGGCAAGATAAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCC....GCCAAGATGGGG..G..G.C.CCCCCTTTT.CGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAGCCCGCCCGCATCAGGGTCTTGCGCACCGGCTTGAACGCATAAAGCGCGC  >  NC_014034/1303858‑1304034

Base quality scores:


ATCG

< 3 ≤


ATCG

< 15 ≤


ATCG

< 23 ≤


ATCG

< 32 ≤


ATCG

< 39 ≤


ATCG