BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	1303934 =	93 (0.410)	37 (0.160)	12/190	28.4	0.22	intergenic (+121/+36)	urtE/RCAP_rcc01231	urea ABC transporter ATP‑binding protein UrtE/UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase
*	?	NC_014034	2566542 =	169 (0.710)	37 (0.160)	12/190	28.4	0.22	intergenic (+14/+180)	purD/sdaA	phosphoribosylamine‑‑glycine ligase/L‑serine ammonia‑lyase
Rejected: Position hash score below cutoff.

Only 100 of 171 total aligned reads displayed.


CAACAGCGCGCCTATGCGATGGTCGATGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAAC.GG.GG.GCGCTGCCCCC.CTC.CT..G..CTTCGGCCAATTCA.CCCCCCGGG.ATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCGGGGGAGC  >  NC_014034/2566445‑2566643


       gcgcCTATGCGATGGTCGATGCGATCGACTGGCCGGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGG.GG.GCGCTGccccc                                                                                                      <  1:154997/101‑1 (MQ=255)


       gcgcCTATGCGATGGTCGATGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGG.GG.GCGCTGccccc                                                                                                      >  1:1763875/1‑101 (MQ=255)


        cgcCTATGCGATGGTCGATGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGG.GG.GCGCTGccccc.c                                                                                                    <  2:3661566/101‑1 (MQ=255)


              tGCGATGGTCGATGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGG.GG.GCGCTGCCCCC.CTC.TT..gg                                                                                           <  1:1286644/101‑2 (MQ=255)


               gCGATGGTCGATGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGG.GG.GCGCTGCCCCC.CTC.TT..ggc                                                                                          <  1:1394923/101‑3 (MQ=255)


                cGATGGTCGATGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGG.GG.GCGCTGCCCCC.CTC.TT..ggcc                                                                                         <  2:2464764/101‑4 (MQ=39)


                 gATGGTCGATGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGG.GG.GCGCTGCCCCC.CTC.TT..ggcct                                                                                        <  1:3895620/101‑5 (MQ=39)


                  aTGGTCGATGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGG.GG.GCGCTGCCCCC.CTC.TT..ggcctt                                                                                       <  2:1659909/101‑6 (MQ=38)


                     gTCGATGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGG.GG.GCGCTGCCCCC.CTC.TT..ggccttcgg                                                                                    <  1:2903263/101‑9 (MQ=38)


                       cGATGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGG.GG.GCGCTGCCCCC.CTC.TT..GGCCTTCGGcc                                                                                  <  1:4189647/101‑1 (MQ=37)


                       cGATGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGG.GG.GCGCTGCCCCC.CTC.TT..GGCCTTCGGcc                                                                                  <  2:2103579/101‑1 (MQ=37)


                        gATGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGG.GG.GCGCTGCCCCC.CTC.TT..GGCCTTCGGCCa                                                                                 >  2:1041278/1‑101 (MQ=37)


                         aTGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTAGCGCGCGCTCTGAGACG.AAACGGG.GG.GCGCTGCCCCC.CTC.TT..GGCCTTCGGCCaa                                                                                <  1:3924085/101‑1 (MQ=25)


                           gCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGG.GG.GCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAAtt                                                                              <  2:2292218/101‑1 (MQ=37)


                           gCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGAAG.AAACGGG.GG.GGGGTGCCCCC.CCC.TTTGG..CTTCGGCCCAtt                                                                              >  1:2847922/1‑101 (MQ=255)


                            cGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGG.GG.GCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTc                                                                             <  1:3216613/101‑1 (MQ=37)


                             gATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGG.GG.GCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCa                                                                            <  1:2629475/101‑1 (MQ=37)


                               tCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGG.GG.GCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.cc                                                                         <  1:2179857/101‑1 (MQ=37)


                                 gACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAAAG.GG.GG.GGGCTGCCCCC.CTC.TT..GGCCTTCGGCCCATTCA.cccc                                                                       >  2:1825213/1‑101 (MQ=25)


                                 gACTGGCCCGAGAGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGG.GG.GCGCTGCCCCC.CTC.TT..GGCCTTCCGCCCATTCC.cccc                                                                       >  1:2529402/1‑101 (MQ=25)


                                  aCTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGG.GG.GCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.ccccc                                                                      <  2:898937/101‑1 (MQ=25)


                                  aCTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGG.GG.GCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.ccccc                                                                      <  1:855845/101‑1 (MQ=25)


                                   cTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGG.GG.GCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.cccccc                                                                     <  1:1662172/101‑1 (MQ=25)


                                       cccGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGG.GG.GCGCTGCCCCC.CCC.TT..GGCCTTCGGGCCAATCA.CCCCCCCGG.a                                                                >  1:632116/1‑101 (MQ=25)


                                        ccGAGGGGTTCTGCCGCCGCGGCATCGGCTGGCGCGCGCTCTGAGACG.AAACGGG.GG.GCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCGGG.at                                                               <  2:399086/101‑1 (MQ=21)


                                         cGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGG.GG.GCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCGGG.ata                                                              <  2:3799192/101‑1 (MQ=25)


                                            ggggTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGG.GG.GCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCGGG.ATAttt                                                           <  1:634884/101‑1 (MQ=21)


                                             gggTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGG.GG.GCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCGGG.ATATTTc                                                          <  1:4294553/101‑1 (MQ=21)


                                             gggTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGG.GG.GCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCGGG.ATATTTc                                                          <  1:3076872/101‑1 (MQ=21)


                                             gggTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGG.GG.GCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCGGG.ATATTTc                                                          <  2:297220/101‑1 (MQ=21)


                                             gggTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGG.GG.GCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCGGG.ATACTTc                                                          <  1:3591918/101‑1 (MQ=21)


                                              ggTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGATACG.AAACGGG.GG.GCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCGGG.ATATTTCg                                                         <  1:2312179/101‑1 (MQ=21)


                                               gTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGG.GG.GCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCGGG.ATATTTCgg                                                        <  1:3282552/101‑1 (MQ=21)


                                               gTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGG.GG.GCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCGGG.ATATTTCgg                                                        <  1:1572687/101‑1 (MQ=21)


                                               gTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGG.GG.GCGCTGCCCCC.CTC.TT..GGCCCTCTGCCCATTCA.CCCCCCCGG.AGATTTCgg                                                        >  2:501699/1‑101 (MQ=21)


                                                ttCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGG.GG.GCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCGGG.ATATTTCggg                                                       <  2:555777/101‑1 (MQ=21)


                                                ttCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGG.GG.GCGCCGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCCGG.AAATTTTggg                                                       >  2:4079914/1‑101 (MQ=21)


                                                 tCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGG.GG.GCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCGGG.ATATTTCGGGc                                                      <  1:1433966/101‑1 (MQ=21)


                                                 tCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGG.GG.GCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCGGG.ATATTTCGGGc                                                      <  1:3531817/101‑1 (MQ=21)


                                                 tCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGG.GG.GCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCGGG.ATATTTCGGGc                                                      <  2:2554543/101‑1 (MQ=21)


                                                  cTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGG.GG.GCGCTGCCCCC.CTCTTT..GC.CTTCGGCCAATTCA.CCCCCCCGG.ATATTTCGGGCa                                                     >  2:2244777/1‑101 (MQ=21)


                                                  cTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGG.GG.GCGCTGCCCCC.CTC.TTTGG..CTTCGGCCCATTCACCCCCCCGGGCAAATTTCggg                                                       >  2:3330359/1‑101 (MQ=21)


                                                  cTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGG.GG.GCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCCGG.ATATTTCGGGCa                                                     >  1:4470570/1‑101 (MQ=21)


                                                    gccgccGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGG.GG.GCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCGGG.ATATTTCGGGCAAg                                                   <  1:4538410/101‑1 (MQ=21)


                                                    gccgccGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGG.GG.GCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCGGG.ATATTTCGGGCAAg                                                   <  1:1027741/101‑1 (MQ=21)


                                                     ccgccgCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGG.GG.GCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCGGG.ATATTTCGGGCAAGa                                                  <  1:2815475/101‑1 (MQ=21)


                                                      cgccgcGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGG.GG.GCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCGGG.ATATTTCGGGCAAGAt                                                 <  2:4296838/101‑1 (MQ=21)


                                                       gccgcGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGG.GG.GCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCGGG.ATATTTCGGGCAAGATa                                                <  1:4086259/101‑1 (MQ=21)


                                                        ccgcGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGG.GG.GCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCGGG.ATATTTCGGGCAAGATaa                                               <  1:1149516/101‑1 (MQ=21)


                                                           cgACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGG.GG.GCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCGGG.ATATTTCGGGCAAGATAaaga                                            >  2:3378349/1‑101 (MQ=21)


                                                           cgACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGG.GG.GCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCGGG.ATATTTCGGGCAAGATAaaga                                            <  1:4128806/101‑1 (MQ=21)


                                                                   gCTGGCGCGCGCTCTGAGACG.AAACGGG.GG.GCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCGGG.ATATTTCGGGCAAGATAAAGAAGGTCttt                                    <  1:399936/101‑1 (MQ=21)


                                                                   gCTGGCGCGCGCGCTGATACG.AAAC.GG.GGTGCGCTCCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCGGG.TTATTTCGGGCAAGATAAAGAAGGTCttt                                    <  2:776877/101‑1 (MQ=21)


                                                                    cTGGCGCGCGCTCTGAGACG.AAACGGG.GG.GCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCGGG.ATATTTCGGGCAAGATAAAGAAGGTCtttt                                   <  2:269921/101‑1 (MQ=21)


                                                                     tGGCGCGCGCTCTGAGACG.AAACGGG.GG.GCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCGGG.ATATTTCGGGCAAGATAAAGAAGGTCTTTTc                                  <  2:4561765/101‑1 (MQ=21)


                                                                       gcgcgcgcTCTGAGACG.AAACGGG.GG.GCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCGGG.ATATTTCGGGCAAGATAAAGAAGGTCTTTTCCt                                <  1:4637538/101‑1 (MQ=21)


                                                                       gcgcgcgcTCTGAGACG.AAACGGG.GG.GCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCGGG.ATATTTCGGGCAAGATAAAGAAGGTCTTTTCCt                                <  2:2512811/101‑1 (MQ=21)


                                                                        cgcgcgcTCTGAGACG.AAACGGG.GG.GCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCC.CCCCCCGGG.ATATTTCGGGCAAGATAAAGAAGGTCTTTTCCtt                               <  1:1621234/101‑1 (MQ=21)


                                                                         gcgcgcTCTGAGACG.AAACGGG.GG.GCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCGGG.ATATTTCGGGCAAGATAAAGAAGGTCTTTTCCttt                              >  1:4404563/1‑101 (MQ=21)


                                                                         gcgcgcTCTGAGACG.AAACGGG.GG.GCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCGGG.ATATTTCGGGCAAGATAAAGAAGGTCTTTTCCttt                              <  2:3148380/101‑1 (MQ=21)


                                                                         gcgcgcTCTGAGACG.AAACGGG.GG.GCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCGGG.ATATTTCGGGCAAGATAAAGAAGGTCTTTTCCttt                              <  2:1425258/101‑1 (MQ=21)


                                                                         gcgcgcTCTGAGACG.AAACGGG.GG.GCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCGGG.ATATTTCGGGCAAGATAAAGAAGGTCTTTTCCttt                              <  1:2863293/101‑1 (MQ=21)


                                                                          cgcgcTCTGAGACG.AAACGGG.GG.GCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCGGG.ATATTTCGGGCAAGGTAAAGAAGGTCTTTTCCTTTc                             <  1:1909872/101‑1 (MQ=21)


                                                                          cgcgcTCTGAGACG.AAACGGG.GG.GCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCGGG.ATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTc                             <  2:927318/101‑1 (MQ=21)


                                                                           gcgcTCTGAGACG.AAACGGG.GG.GCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCGGG.ATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCa                            <  1:4553568/101‑1 (MQ=21)


                                                                           gcgcTCTGAGACG.AAACGGG.GG.GCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCGGG.ATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCa                            <  1:3657419/101‑1 (MQ=21)


                                                                           gatctctGAGACG.AAACGGG.GG.GCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCGGG.ATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCa                            <  1:949411/98‑1 (MQ=21)


                                                                             gcTCTGAGACG.AAACGGG.GG.GCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCGGG.ATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATc                          <  2:4332674/101‑1 (MQ=21)


                                                                             gcTCTGAGACG.AAACGGG.GG.GCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCGGG.ATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATc                          <  2:3829338/101‑1 (MQ=21)


                                                                             gcTCTGAGACG.AAACGGG.GG.GCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCGGG.ATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATc                          <  2:358972/101‑1 (MQ=21)


                                                                             gcTCTGAGACG.AAACGGG.GG.GCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCGGG.ATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATc                          <  1:2371067/101‑1 (MQ=21)


                                                                                ctGAGACG.AAACGGG.GG.GCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCGGG.ATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTg                       >  1:576538/1‑101 (MQ=21)


                                                                                ctGAGACG.AAACGGG.GG.GCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCGGG.ATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTg                       <  1:3848187/101‑1 (MQ=21)


                                                                                ctGAGACG.AAACGGG.GG.GCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCGGG.ATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTg                       <  1:2426478/101‑1 (MQ=21)


                                                                                    gaCG.AAACGGG.GG.GCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCGGG.ATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCg                   <  1:206365/101‑1 (MQ=21)


                                                                                     aCG.AAACGGG.GG.GCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCGGG.ATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGa                  >  1:3476249/1‑101 (MQ=21)


                                                                                       g.AAACGGG.GG.GCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCGGG.ATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGaaa                <  1:433325/101‑1 (MQ=21)


                                                                                         aaacggg.gg.gCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCGGG.ATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAat               <  1:4226586/96‑1 (MQ=21)


                                                                                         aaaC.GGCGG.GCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCGGG.ATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAat               <  1:766337/101‑1 (MQ=25)


                                                                                          ggcagg.gg.gCGCTG.CCCC.CTC.TT..GGCCTTTGGCCAATTCA..CCCCTGGG.ATATTTCGGGCAAGAT...GAA.ATCATGCCCCTTCATCTTGCCGCAAATATCCCgg        >  1:2566399/5‑101 (MQ=0)


                                                                                          aacggg.gg.gCGCTGCCCCC.CTC.TT..GGCCTTCGGGCAATTCA.CCCCCCGGG.ATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAata              <  1:3970909/97‑1 (MQ=25)


                                                                                          aacggg.gg.gCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCGGG.ATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAata              <  2:2855141/97‑1 (MQ=25)


                                                                                          aacggg.gg.gCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCGGG.ATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAata              >  2:2512064/5‑101 (MQ=25)


                                                                                          aacggg.gg.gCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCGGG.ATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAata              <  2:4025294/97‑1 (MQ=25)


                                                                                          aacggg.gg.gCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCGGG.ATATTTCGGGCAAGATAAAGAAGGGCTTTTCCTTTCATCTTTCCCGAAata              >  1:3728697/5‑101 (MQ=21)


                                                                                           gcagg.gg.gCGCTG.CCCC.CTC.TT..GGCCTTTGGCCAATTCA..CCCCTGGG.ATATTTCGGGCAAGAT...GAA.ATCATGCCCCTTCATCTTGCCGCAAATATCCCggg       >  1:1479095/4‑101 (MQ=0)


                                                                                           acggg.gg.gCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCGGG.ATATTTCGGGCAAGATAAAGAAGGACTTTTTCTTTCATCTTTCCCGAAaaat             >  1:266360/4‑101 (MQ=18)


                                                                                            cagg.gg.gCGCTG.CCCC.CTC.TT..GGCCTTTGGCCAATTCA..CCCCTGGG.ATATTTCGGGCAAGAT...GAA.ATCATGCCCCTTCATCTTGCCGCAAATATCCCgggg      >  2:3063307/3‑101 (MQ=0)


                                                                                             ggg.gg.gCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCGGG.ATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATcc           <  2:3092070/100‑1 (MQ=25)


                                                                                             agg.gg.gCGCTGCCCCCTCTT.GG..C..CTTTGGCCAATTCA..CCCCTGGG.ATATTTCGGGCAAGAT...GAA.ATCATGCCCCTTCATCTTGCCGCAAATATCCCggggg     >  1:3136529/2‑101 (MQ=0)


                                                                                             agg.gg.gCGCTG.CCCC.CTC.TT..GGCCTTTGGCCAATTCA..CCCCTGGG.ATATTTCGGGCAAGAT...GAA.ATCATGCCCCTTCATCTTGCCGCAAATATCCCggggg     >  2:2229699/2‑101 (MQ=0)


                                                                                             agg.gg.gCGCTG.CCCC.CTC.TT..GGCCTTTGGCCAATTCA..CCCCTGGG.ATATTTCGGGCAAGAT...GAA.ATCATGCCCCTTCATCTTGCCGCAAATATCCCggggg     >  1:3636398/2‑101 (MQ=0)


                                                                                             agg.gg.gCGCTG.CCCC.CTC.TT..GGCCTTTGGCCAATTCA..CCCCTGGG.ATATTTCGGGCAAGAT...GAA.ATCATGCCCCTTCATCTTGCCGCAAATATCCCggggg     >  2:2620134/2‑101 (MQ=0)


                                                                                              gg.gg.gCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCC.CCCCCCGGG.ATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATccc          <  2:1496807/101‑1 (MQ=25)


                                                                                              gg.gg.gCGCTG.CCCC.CTC.TT..GGCCTTTGGCCAATTCA..CCCCTGGG.ATATTTCGGGCAAGAT...GAA.ATCATGCCCCTTCATCTTGCCGCAAATATCCCgggggg    >  2:1500855/1‑100 (MQ=0)


                                                                                               g.gg.gCGCTGCCCCCTCTT.GG..C..CTTTGGCCAATTCA..CCCCTGGG.ATATTTCGGGCAAGAT...GAA.ATCATGCCCCTTCATCTTGCCGCAAATATCCCgggggga   <  1:1280857/101‑3 (MQ=0)


                                                                                               g.gg.gCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCGGG.ATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCg         <  1:4310501/101‑1 (MQ=25)


                                                                                                 gg.gCGCTGCCCCCTCTT.GG..C..CTTTGGCCAATTCA..CCCCTGGG.ATATTTCGGGCAAGAT...GAA.ATCATGCCCCTTCATCTTGCCGCAAATATCCCggggggag  >  2:453797/1‑98 (MQ=2)


                                                                                                 gg.gCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCGGG.ATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCgg        <  2:1846739/101‑1 (MQ=37)


                                                                                                  g.gCGCTGCCCCC.CTC.TT..GGCCTTCGGCCAATTCA.CCCCCCGGG.ATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCggg       <  1:1041361/101‑1 (MQ=37)


CAACAGCGCGCCTATGCGATGGTCGATGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAAC.GG.GG.GCGCTGCCCCC.CTC.CT..G..CTTCGGCCAATTCA.CCCCCCGGG.ATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCGGGGGAGC  >  NC_014034/2566445‑2566643

Base quality scores:


ATCG

< 3 ≤


ATCG

< 18 ≤


ATCG

< 26 ≤


ATCG

< 33 ≤


ATCG

< 41 ≤


ATCG