BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	1303934 =	87 (0.390)	64 (0.280)	17/190	25.1	0.37	intergenic (+121/+36)	urtE/RCAP_rcc01231	urea ABC transporter ATP‑binding protein UrtE/UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase
*	?	NC_014034	2640144 =	131 (0.550)	64 (0.280)	17/190	25.1	0.37	intergenic (‑120/+156)	thrS/RCAP_rcc02462	threonyl‑tRNA synthetase/hypothetical protein
Rejected: Position hash score below cutoff.

Only 100 of 142 total aligned reads displayed.


GCGGCTACAAAGCGCCCGGTTGCGGGTTATGATGCGCCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCT.C.TT.G.G.C.TTCGGCCAATTCGCCCCCCGAGGTATTTGGAACAAGATGAAAAGACCATG..GGTTCATCTTGCCTCAAATATCCCGGGGGGAGTC  >  NC_014034/2640045‑2640245


gcggcTACAAAGCGCCCGGTTGCGGGTTATGATGCGCCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGgcg                                                                                                              <  2:2910887/101‑1 (MQ=255)


  ggcTACAAAGCGCCCGGTTGCGGGTTATGATGCGCCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCt                                                                                                            <  1:3463860/101‑1 (MQ=255)


  ggcTACAAAGCGCCCGGTTGCGGGTTATGATGCGCCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCt                                                                                                            <  1:507283/101‑1 (MQ=255)


  ggcTACAAAGCGCCCGGTTGCGGGTTATGATGCGCCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCt                                                                                                            <  2:3204844/101‑1 (MQ=255)


   gcTACAAAGCGCCCGGTTGCGGGTTATGATGCGCCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTg                                                                                                           <  2:1315371/101‑1 (MQ=255)


    cTACAAAGCGCCCGTTTGCGGGTTATGATGCGCCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGc                                                                                                          <  1:2855087/101‑1 (MQ=255)


    cTACAAAGCGCCCGGTTGCGGGTTATGATGCGCCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGc                                                                                                          <  1:625799/101‑1 (MQ=255)


    cTACAAAGCGCCCGGTTGCGGGTTATGATGCGCCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGc                                                                                                          <  1:338697/101‑1 (MQ=255)


     tACAAAGCGCCCGGTTGCGGGTTATGATGCGCCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGcc                                                                                                         <  1:1069630/101‑1 (MQ=255)


          aGCGCCCGGTTGCGGGTTATGATGCGCCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCct                                                                                                    <  2:2103801/101‑1 (MQ=255)


           gcgcCCGGTTGCGGGTTATGATGCGCCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCct.c                                                                                                  <  2:1219146/101‑1 (MQ=255)


           gcgcCCGGTTGCGGGTTATGATGCGCCGGGTATGCGACGCGGCCGCAGGCGTGTCAACCGTGGCGCTTTTGGGCAGGCAAAAGGGGGGCGCCGCCCCCct.c                                                                                                  <  2:3840824/101‑1 (MQ=255)


            cgcCCGGTTGCGGGTTATGATGCGCCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCct.c.t                                                                                                <  2:1462303/101‑1 (MQ=255)


             gcCCGGTTGCGGGTTATGATGCGCCGGGTATGCGACGCGGCGGCAGGCGTGTCAGCCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCT.C.tt                                                                                               <  1:160226/101‑1 (MQ=255)


             gcCCGGTTGCGGGTTATGATGCGCCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCT.C.tt                                                                                               <  2:4081743/101‑1 (MQ=255)


             gcCCGGTTGCGGGTTATGATGCGCCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCT.C.tt                                                                                               <  1:1994126/101‑1 (MQ=255)


             gcCCGGTTGCGGGTTATGATGCGCCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCT.C.tt                                                                                               <  2:2564803/101‑1 (MQ=255)


              cccGGTTGCGGGTTATGATGCGCCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCT.C.TT.g                                                                                             <  2:4655727/101‑1 (MQ=255)


                 ggTTGCGGGTTATGATGCGCCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCT.C.TT.G.G.cc                                                                                        <  2:420882/101‑2 (MQ=255)


                 ggTTGCGGGTTATGATGCGCCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCT.C.TT.G.G.cc                                                                                        <  1:2340572/101‑2 (MQ=255)


                  gTTGCGGGTTATGATGCGCCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCT.C.TT.G.G.cct                                                                                       <  1:199436/101‑3 (MQ=255)


                   ttGCGGGTTATGATGCGCCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCT.C.TT.G.G.cctt                                                                                      <  2:13897/101‑4 (MQ=255)


                   ttGCGGGTTATGATGCGCCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCT.C.TT.G.G.cctt                                                                                      >  2:1402172/1‑98 (MQ=255)


                   ttGCGGGTTATGATGCGCCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCT.C.TT.G.G.cctt                                                                                      <  1:1021698/101‑4 (MQ=255)


                    tGCGGGTTATGATGCGCCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCT.C.TT.G.G.ccttc                                                                                     >  2:1242490/1‑97 (MQ=255)


                    tGCGGGTTATGATGCGCCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCT.C.TT.G.G.ccttc                                                                                     <  2:1880270/101‑5 (MQ=255)


                     gCGGGTTATGATGCGCCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCT.C.TT.G.G.ccttcg                                                                                    <  2:2023419/101‑6 (MQ=255)


                      cGGGTTATGATGCGCCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGGGCTGCCCCCCC.CTTT.G.C.C.TTCgg                                                                                   >  1:2241583/1‑101 (MQ=255)


                       gggTTATGATGCGCCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCT.C.TT.G.GCC.TTCGGc                                                                                  <  2:3452555/101‑1 (MQ=255)


                         gTTATGATGCGCCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCT.C.TT.G.GCC.TTCGGCCa                                                                                <  1:4242047/101‑1 (MQ=255)


                          ttATGATGCGCCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCT.C.TT.G.GCC.TTCGGCCaa                                                                               <  2:775876/101‑1 (MQ=255)


                           tATGATGCGCCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCT.C.TT.G.GCC.TTCGGCCAAt                                                                              <  2:4224664/101‑1 (MQ=255)


                             tgatgCGCCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCT.C.TT.G.GCC.TTCGGCCAATTc                                                                            <  1:4056580/101‑1 (MQ=255)


                              gatgCGCCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGTCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCT.C.TT.G.GCC.TTCGGCCAATTca                                                                           <  1:3874659/101‑2 (MQ=255)


                                 gcgcCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCT.C.TT.G.GCC.TTCGGCCAATTCAccc                                                                        <  2:1043641/101‑1 (MQ=255)


                                 gcgcCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCT.C.TT.G.GCC.TTCGGCCAATTCAccc                                                                        <  1:566148/101‑1 (MQ=255)


                                  cgcCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCT.C.TT.G.GCC.TTCGGCCAATTCAcccc                                                                       <  1:742829/101‑1 (MQ=255)


                                   gcCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGGTGCCCCCCT.CTTT.G.C.C.TTCGGCCAATTCCccccc                                                                      >  1:2171036/1‑101 (MQ=255)


                                   gcCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCT.C.TT.G.GCC.TTCGGCCAATTCAccccc                                                                      <  2:588026/101‑1 (MQ=255)


                                    ccGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCT.C.TT.G.GCC.TTCGGCCAATTCAcccccc                                                                     <  2:2761747/101‑1 (MQ=255)


                                     cGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCT.C.TT.G.GCC.TTCGGCCAATTCACCCCCCg                                                                    >  1:1371832/1‑101 (MQ=255)


                                       ggTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCT.C.TT.G.GCC.TTCGGCCAATTCACCCCCCGAg                                                                  <  2:1554785/101‑1 (MQ=255)


                                        gTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCT.C.TT.G.GCC.TTCGGCCAATTCACCCCCCGAgg                                                                 <  2:2171866/101‑1 (MQ=255)


                                          aTGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCT.C.TT.G.GCC.TTCGGCCAATTCACCCCCCGAGGTa                                                               <  2:3438448/101‑1 (MQ=255)


                                            gCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCT.C.TT.G.GCC.TTCGGCCAATTCACCCCCCGAGGTAtt                                                             <  2:756326/101‑1 (MQ=255)


                                                  cggcggCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCT.C.TT.G.GCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGagc                                                       <  1:1112830/101‑3 (MQ=255)


                                                     cggcAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCT.C.TTGG.G.C.TTCGGCCCATTCACCCCCCCAGGGATTTTGaggaag                                                    >  2:3682733/1‑96 (MQ=25)


                                                       gccagCGTGTGAACCGTGGCGCTTTTGCTCAGGCGAAAGGGGGGCTGTGCCCCCCT.C.TT.G.GCC.TTCGGGCAATTCACCCCCCGAGGTATTTGGAGCAAGAt                                                  <  2:513021/97‑1 (MQ=21)


                                                       gcAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCT.C.TT.G.GCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGAt                                                  <  1:1820549/101‑1 (MQ=37)


                                                       gcAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCT.C.TT.G.GCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGAt                                                  <  2:3801667/101‑1 (MQ=37)


                                                        cAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCT.C.TT.G.GCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATg                                                 <  2:1805999/101‑1 (MQ=37)


                                                         aGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCT.C.TT.G.GCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATGa                                                <  2:2367902/101‑1 (MQ=37)


                                                         aGGCGTATCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCGCCCCT.C.TT.G.GCC.TTCGGCCATTTCACCCCCCGAGGTACTTGGAGCAAGACGa                                                <  1:2659316/101‑1 (MQ=25)


                                                          ggCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCT.C.TT.G.GCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATGaa                                               <  1:2184471/101‑1 (MQ=25)


                                                          ggCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCC.C.TT.G.G.CGCTTGGGCCATTTACCCCCCCAGGTATTTGGAGGAAGATGaa                                               >  1:2089534/1‑101 (MQ=255)


                                                           gCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCT.C.TT.G.GCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATGaaa                                              <  1:1897055/101‑1 (MQ=25)


                                                            cGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGGGCTGCCCCCCT.C.TTCT.C.C.TTCGGCCAATTCACCCCCCCCGGTATTTTGAGCAAGATGaaaa                                             >  2:1682965/1‑101 (MQ=25)


                                                               gtCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCT.C.TT.G.GCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATGaaagacc                                          <  1:1109101/101‑5 (MQ=25)


                                                                 catccGTGGCGCTTTTGCGCACGCCATATCGGGGCGCAGCGCCCCT.C.TT.GCA.C.TTAGGCCAATTCGCCCCCCGAGGTATTTGGAGCAAGATGaaatgccat                                        <  2:2492458/98‑7 (MQ=255)


                                                                   aCCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCT.C.TT.G.GCC.TTCGGCCAATTCCCCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATg..g                                   <  1:1652240/101‑1 (MQ=25)


                                                                    ccGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCT.C.TT.G.GCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATg..gg                                  <  1:401648/101‑1 (MQ=25)


                                                                       tGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCT.C.TTCG.T.C.TTTGGCCAATTCAGCCTCCGAGGTATTTTTGCCAAGATG.CAAGAGCATG..GGTTc                               >  2:3141611/1‑101 (MQ=16)


                                                                        ggCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCT.C.TT.G.GCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GGTTCa                              <  2:2789973/101‑1 (MQ=25)


                                                                         gcgcTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCT.C.TT.G.GCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GGTTCAt                             <  2:898430/101‑1 (MQ=25)


                                                                            cTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCT.C.TT.G.GCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GGTTCATCtt                          <  1:3304586/101‑1 (MQ=21)


                                                                             ttttGCGCAGGCAAAAGGGGGGCGCTGCCCCCCT.C.TT.G.GCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GGTTCATCTTg                         <  2:2517352/101‑1 (MQ=25)


                                                                                tGCGCAGGCAAAAGGGGGGCGCTGCCCCCCT.C.TT.G.GCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GGTTCATCTTGcgt                      <  2:65143/101‑3 (MQ=21)


                                                                                 gcgcAGGCAAAAGGGGGGCGCTGCCCCCCT.C.TTAG.C.C.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GGTTCATCTTGCCTc                     <  1:4563587/101‑1 (MQ=25)


                                                                                 gcgcAGGCAAAAGGGGGGCGCTGCCCCCCT.C.TT.G.GCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GGTTCATCTTGCCTc                     <  1:2311517/101‑1 (MQ=21)


                                                                                 gcgcAGGCAAAAGGGGGGCGCTGCCCCCCT.C.TT.G.GCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GGTTCATCTTGCCTc                     <  2:2584354/101‑1 (MQ=25)


                                                                                   gcAGGCAAAAGGGGGGCGCTGCCCCCCT.C.TT.G.GCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GGTTCATCTTGCCTCaa                   <  2:843951/101‑1 (MQ=25)


                                                                                    gccccgaaaAGGGGGCGCTGCCCCCCT.C.TT.G.GCC.TTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGG..GGTTTATCTTGCCCCAAat                 <  2:2641040/95‑1 (MQ=14)


                                                                                      ggCAAAAGGGGGGCGCTGCCCCCCT.C.TT.G.GCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GGTTCATCTTGCCTCAAata                <  2:3575984/101‑1 (MQ=21)


                                                                                      cccgaaaAGGGGGCGCTGCCCCCCT.C.TT.G.GCC.TTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGG..GGTTTATCTTGCCCCAAatat               <  2:2473130/97‑1 (MQ=17)


                                                                                        cgaaaAGGGGGCGCTGCCCCCCT.C.TT.G.GCC.TTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGG..GGTTTATCTTGCCCCAAATATcc             >  2:4119652/3‑101 (MQ=17)


                                                                                        cgaaaAGGGGGCGCTGCCCCCCT.C.TT.G.GCC.TTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGG..GGTTTATCTTGCCCCAAATATcc             <  2:575675/99‑1 (MQ=17)


                                                                                        cgaaaAGGGGGCGCTGCCCCCCT.C.TT.G.GCC.TTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGG..GGTTTATCTTGCCCCAAATATcc             <  1:4234149/99‑1 (MQ=17)


                                                                                         gaaaAGGGGGCGCTGCCCCCCT.C.TT.G.GCC.TTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGG..GGTTTATCTTGCCCCAAATATccc            <  1:1215644/100‑1 (MQ=17)


                                                                                         gaaaAGGGGGCGCTGCCCCCCT.C.TT.G.GCC.TTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGG..GGTTTANCTTGCCCCAAATATccc            >  2:1778669/2‑101 (MQ=17)


                                                                                          aaaGGGGGGCGCTGCCCCCCT.C.TT.G.GCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GGTTCATCTTGCCTCAAATATccc            <  2:3189647/101‑1 (MQ=21)


                                                                                          aaaGGGGGGCGCTGCCCCCCT.C.TT.G.GCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GGTTCATCTTGCCTCAAATATccc            <  1:518442/101‑1 (MQ=25)


                                                                                          aaaGGGGGGC.CCGCCCCCCTCC.TT.G.G.C.CTCCGGCAAATCCCCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GGTTCATCTTGCCTCAAATATCCCg           <  1:3006725/101‑1 (MQ=21)


                                                                                          aaaAGGGGGCCCTGCCCCCCT.C.TT.G.GCC.TTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGG..GGTTTATCTTGCCCCAAATATCCCg           <  1:258985/101‑1 (MQ=18)


                                                                                           aaagggggCGCTGCCCCCCT.C.TT.G.GCC.TTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGG..GGTTTATCTTGCCCCAAATATCCCgg          >  2:3705510/4‑101 (MQ=17)


                                                                                             agggggCGCTGCCCCCCT.C.TT.G.GCC.TTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGG..GGTTTATCTTGCCCCAAATATCCCgggg        >  1:1356112/2‑101 (MQ=18)


                                                                                              gggggCGCTGCCCCCCT.C.TT.G.GCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GGTTCATCTTGCCTCAAATATCCCgggg        <  2:2731094/101‑1 (MQ=25)


                                                                                              gggggCGCTG.CCCCCT.C.TT.G.GCC.TTTGGCCAATTC.ACCCCTGGGATATTTCGGGCAAGATGAA...ATCATGCCCCTTCATCTTGCCGCAAATATCCCgggggg      <  2:2120767/101‑1 (MQ=2)


                                                                                                gggCGCTGCCCCCCT.C.TT.G.GCC.TTCGGCCAATTCACGCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GGTTCATCTTGCCTCAAATATCCCgggggg      <  2:2321714/101‑1 (MQ=25)


                                                                                                gggCGCTGCCCCCCT.C.TT.G.GCC.TTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGG..GGTTTATCTTGCCCCAAATATCCCgggggtg     >  1:4408096/1‑99 (MQ=18)


                                                                                                gggCGCTGCCCCCCT.C.TT.G.GCC.TTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGG..GGTTTATCTTGCCCCAAATATCCCgggggtg     >  2:4392741/1‑99 (MQ=18)


                                                                                                gggCGCTGCCCCCCT.C.TT.G.GCC.TTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGG..GGTTTATCTTGCCCCAAATATCCCgggggtg     <  2:2966740/101‑3 (MQ=18)


                                                                                                gggCGCTGCCCCCCT.C.TT.G.GCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GGTTCATCTTGCCTCAAATATCCCgggggg      >  2:2721403/1‑101 (MQ=25)


                                                                                                 ggCGCTGCCCCCCT.C.TT.G.GCC.TTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGG..GGTTTATCTTGCCCCAAATATCCCgggggtga    <  1:4092162/101‑4 (MQ=21)


                                                                                                 ggCGCTGCCCCCCT.C.TT.G.GCC.TTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGGGAAAGGA.TGGG..GGTT.ATCTTGCCCCAAATATCCCggggggga    >  2:2151925/1‑99 (MQ=18)


                                                                                                 ggCGCTGCCCCCCT.C.TT.G.GCC.TTCGGCCAATTCACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATG..GGTTCATCTTGCCTCAAATATCCCGGGGGGa     <  2:1026362/101‑1 (MQ=25)


                                                                                                 gccgcTGCCCCCCT.C.TT.G.GCC.TTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGG..GGTTTATCTTGCCCCAAATATCCCgggggtga    <  1:1084325/99‑4 (MQ=21)


                                                                                                  gcgcTGCCCCCCT.C.TT.G.GCC.TTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGG..GGTTTATCTTGCCCCAAATATCCCgggggtgag   <  2:4149903/101‑5 (MQ=21)


                                                                                                  gcgcTGCCCCCCT.C.TT.G.GCC.TTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGG..GGTTTATCTTGCCCCAAATATCCCgggggtgag   <  1:3417906/101‑5 (MQ=21)


                                                                                                   cgcTGCCCCCCT.C.TT.G.GCC.TTCGGCCAATTCGCCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGG..GGTTTATCTTGCCCCAAATATCCCgggggtgagg  <  2:3939473/101‑6 (MQ=21)


                                                                                                   cgcTGCCCCCCT.C.TT.G.GCC.TTCGGCCAATTCACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGG..GGTTTATCTTGCCCCAAATATCCCgggggtgagg  >  2:1877863/1‑96 (MQ=21)


GCGGCTACAAAGCGCCCGGTTGCGGGTTATGATGCGCCGGGTATGCGACGCGGCGGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCT.C.TT.G.G.C.TTCGGCCAATTCGCCCCCCGAGGTATTTGGAACAAGATGAAAAGACCATG..GGTTCATCTTGCCTCAAATATCCCGGGGGGAGTC  >  NC_014034/2640045‑2640245

Base quality scores:


ATCG

< 3 ≤


ATCG

< 18 ≤


ATCG

< 27 ≤


ATCG

< 33 ≤


ATCG

< 40 ≤


ATCG