BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	1395832 =	150 (0.930)	43 (0.270)	13/136	21.1	0.23	intergenic (+644/‑287)	RCAP_rcc01306/RCAP_rcc01307	Cas2 family CRISPR‑associated protein/hypothetical protein
*	?	NC_014034	= 1396269	136 (0.570)	43 (0.270)	13/136	21.1	0.23	coding (151/1578 nt)	RCAP_rcc01307	hypothetical protein
Rejected: Position hash score below cutoff.

Only 100 of 195 total aligned reads displayed.


CGCTCCCCCCGCGGGGGCGTGGATCGAAACCCGGCGAAAAACGGCCATGCCTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACTTCTGTTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAGCAGTGGGGTGAGTGGGCTGACCAGACAAACGCT  >  NC_014034/1396169‑1396369


   tCCCCCCGCGGGGGCGTGGATCGAAACCCGGCGAAAAACGGCCATGCCTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAgg                                                                                                   >  2:2904983/1‑101 (MQ=255)


    ccccccGCGGGGGCGTGGATCTAAACCCGGCGCTAAACGGCCATGGGTCCGGGTGTCCGGCTGTCCCGCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGt                                                                                                  <  1:3983614/101‑1 (MQ=37)


    ccccccGCGGGGGCGTGGATCGAAACCCGGCGAAAAACGGCCATGCCTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGt                                                                                                  <  2:1722200/101‑1 (MQ=255)


    ccccccGCGGGGGCGTGGATCGAAACCCGGCGAAAAACGGCCATGCCTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGt                                                                                                  <  1:2388845/101‑1 (MQ=255)


      ccccGCGGGGGCGTGGATCGAAACCCGGCGAAAAACGGCCATGCCTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCa                                                                                                <  1:3135792/101‑1 (MQ=255)


      ccccGCGGGGGCGTGGATCGAAACCCGGCGAAAAACGGCCATGCCTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCa                                                                                                <  2:47029/101‑1 (MQ=255)


        ccGCGGGGGCGTGGATCGAAACCCGGCGAAAAACGGCCATGCCTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGc                                                                                              >  2:207616/1‑101 (MQ=255)


        ccGCGGGGGCGTGGATCGAAACCCGGCGAAAAACGGCCATGCCTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGc                                                                                              >  2:335685/1‑101 (MQ=255)


        ccGCGGGGGCGTGGATCGAAACCCGGCGAAAAACGGCCATGCCTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGGCAGc                                                                                              >  1:2167774/1‑101 (MQ=255)


               ggCGTGGATCGAAACCCGGCGAAAAACGGCCATGCCTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGcc                                                                                       <  1:4340817/101‑1 (MQ=255)


                gCGTGGATCGAAACCCGGCGAAAAACGGCCATGCCTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGccc                                                                                      <  2:1480366/101‑1 (MQ=255)


                 cGTGGATCGAAACCCGGCGAAAAACGGCCATGCCTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGcccc                                                                                     <  1:3277320/101‑1 (MQ=255)


                  gTGGATCGAAACCCGGCGAAAAACGGCCATGCCTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCg                                                                                    <  2:3865465/101‑1 (MQ=255)


                  gTGGATCGAAACCCGGCGAAAAACGGCCATGCCTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCg                                                                                    <  1:3585495/101‑1 (MQ=255)


                  gTGGATCGAAACCCGGCGAAAAACGGCCATGCCTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCg                                                                                    <  1:2448921/101‑1 (MQ=255)


                       tCGAAACCCGGCGAAAAACGGCCATGCCTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGaa                                                                               >  1:2995539/1‑101 (MQ=255)


                         gAAACCCGGCGAAAAACGGCCATGCCTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACt                                                                             <  2:3234727/101‑1 (MQ=255)


                         gAAACCCGGCGAAAAACGGCCATGCCTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACt                                                                             >  2:392212/1‑101 (MQ=255)


                         gAAACCCGGCGAAAAACGGCCATGCCTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACt                                                                             >  1:196772/1‑101 (MQ=255)


                          aaaCCCGGCGAAAAACGGCCATGCCTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACtt                                                                            <  2:2236962/101‑1 (MQ=255)


                          aaaCCCGGCGAAAAACGGCCATGCCTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACtt                                                                            >  1:702954/1‑101 (MQ=255)


                           aaCCCGGCGAAAAACGGCCATGCCTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACTTc                                                                           >  1:887246/1‑101 (MQ=255)


                           aaCCCGGCGAAAAACGGCCATGCCTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACTTc                                                                           <  2:3285850/101‑1 (MQ=255)


                            aCCCGGCGAAAAACGGCCATGCCTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACTTCt                                                                          <  1:2335748/101‑1 (MQ=255)


                            aCCCGGCGAAAAACGGCCATGCCTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACTTCt                                                                          <  1:841068/101‑1 (MQ=255)


                               cGGCGAAAAACGGCCATGCCTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACTTCTGtt                                                                       >  1:2782983/1‑101 (MQ=255)


                                ggCGAAAAACGGCCATGCCTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACTTCTGTtc                                                                      >  2:360129/1‑101 (MQ=255)


                                ggCGAAAAACGGCCATGCCTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACTTCTGTtc                                                                      <  2:2829990/101‑1 (MQ=255)


                                  cGAAAAACGGCCATGCCTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACTTCTGTtcgt                                                                    >  1:3552467/1‑101 (MQ=255)


                                  cGAAAAACGGCCATGCCTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACTTCTGTtcgt                                                                    <  2:108365/101‑1 (MQ=255)


                                   gAAAAACGGCCATGCCTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACTTCTGTtcgtc                                                                   >  2:3554350/1‑101 (MQ=255)


                                   gAAAAACGGCCATGCCTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACTTCTGTtcgtc                                                                   <  2:3437006/101‑1 (MQ=255)


                                   gAAAAACGGCCATGCCTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACTTCTGTtcgtc                                                                   <  2:2448645/101‑1 (MQ=255)


                                     aaaaCGGCCATGCCTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACTTCTGTTCGTCGc                                                                 >  1:878369/1‑101 (MQ=255)


                                     aaaaCGGCCATGCCTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACTTCTGTTCGTCGc                                                                 <  1:624339/101‑1 (MQ=255)


                                      aaaCGGCCATGCCTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACTTCTGTTCGTCGCt                                                                >  2:4274563/1‑101 (MQ=255)


                                       aaCGGCCATGCCTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACTTCTGTTCGTCGCTc                                                               >  2:1786280/1‑101 (MQ=255)


                                       aaCGGCCATGCCTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACTTCTGTTCGTCGCTc                                                               >  2:875563/1‑101 (MQ=255)


                                         ccgCCATGCCTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACTTCTGTTCGTCGCTccc                                                             <  1:3663301/99‑1 (MQ=255)


                                          ggCCATGCCTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACTTCTGTTCGTCGCTcccc                                                            >  1:2240380/1‑101 (MQ=255)


                                          ggCCATGCCTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACTTCTGTTCGTCGCTcccc                                                            >  1:459598/1‑101 (MQ=255)


                                           gCCATGCCTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACTTCTGTTCGTCGCTccccc                                                           <  2:724768/101‑1 (MQ=255)


                                             cATGCCTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACTTCTGTTCGTCGCTCCCCCcg                                                         <  2:2531433/101‑1 (MQ=255)


                                             cATGCCTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACTTCTGTTCGTCGCTCCCCCcg                                                         >  2:540790/1‑101 (MQ=255)


                                              cggCCTCCGGGTGTCGGGGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACTTCTGTTCGTCGCTCCCCCcgc                                                        <  2:860518/99‑1 (MQ=255)


                                              aTGCCTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACTTCTGTTCGTCGCTCCCCCcgc                                                        >  1:741515/1‑101 (MQ=255)


                                                gCCTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACTTCTGTTCGTCGCTCCCCCCGCgg                                                      >  2:3980151/1‑101 (MQ=255)


                                                 ccTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACTTCTGTTCGTCGCTCCCCCCGCggg                                                     >  2:3663836/1‑101 (MQ=255)


                                                  cTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACTTCTGTTCGTCGCTCCCCCCGCgggg                                                    >  1:1603421/1‑101 (MQ=255)


                                                        gtggCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACTTCTGCTCGTCGCTCCCCCCGCGGGGGCGTgg                                              >  2:1519620/1‑101 (MQ=255)


                                                          gtCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACTTCTGTTCGTCGCTCCCCCCGCGGGGGCGTGGAt                                            >  1:2597361/1‑101 (MQ=255)


                                                          gtCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACTTCTGTTCGTCGCTCCCCCCGCGGGGGCGTGGAt                                            <  2:129393/101‑1 (MQ=255)


                                                          gtCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACTTCTGTTCGTCGCTCCCCCCGCGGGGGCGTGGAt                                            <  1:2905212/101‑1 (MQ=255)


                                                           tCTGGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACTTCTGTTCGTCGCTCCCCCCGCGGGGGCGTGGATc                                           <  2:2734635/101‑1 (MQ=255)


                                                            cTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACTTCTGTTCGTCGCTCCCCCCGCGGGGGCGTGGATCg                                          >  2:4389340/1‑101 (MQ=255)


                                                             tGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACTTCTGTTCGTCGCTCCCCCCGCGGGGGCGTGGATCGa                                         >  1:3226871/1‑101 (MQ=255)


                                                              ggCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACTTCTGTTCGTCGCTCCCCCCGCGGGGGCGTGGATCGaa                                        >  1:2013445/1‑101 (MQ=255)


                                                               gCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACTTCTGTTCGTCGCTCCCCCCGCGGGGGCGTGGATCGaaa                                       <  1:3903826/101‑1 (MQ=255)


                                                                cTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACTTCTGTTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAc                                      >  1:487402/1‑101 (MQ=255)


                                                                 tGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACTTCTGTTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACa                                     <  1:1906422/101‑1 (MQ=255)


                                                                 tGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACTTCTGTTCGTCGCTCCCCCCGCGGGGGCGGGGATCGAAACa                                     >  1:1426912/1‑101 (MQ=255)


                                                                 tGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACTTCTGTTCGTCGCTCCCCCCCCGGGGGCGTGGATCGAAACa                                     >  2:2981871/1‑101 (MQ=255)


                                                                   tCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACTTCTGTTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAg                                   <  2:2712299/101‑1 (MQ=255)


                                                                     gCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACTTCTGTTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAGCa                                 >  2:4492082/1‑101 (MQ=255)


                                                                     gCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACTTCTGTTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAGCa                                 >  1:3947149/1‑101 (MQ=255)


                                                                      cTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACTTCTGTTCGTCGCTCCCCCCGCGGGGGCGTGGATCGATACAAGCAg                                >  1:4026627/1‑101 (MQ=255)


                                                                      cTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACTTCTGTTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAGCAg                                >  2:3157828/1‑101 (MQ=255)


                                                                       tCCCCCCGCGGGGTCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACTTCTGTTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAGCAGt                               >  1:2081235/1‑101 (MQ=255)


                                                                       tCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACTTCTGTTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAGCAgg                               >  2:673635/1‑100 (MQ=255)


                                                                       tCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACTTCTGTTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAGCAGt                               >  2:2778956/1‑101 (MQ=255)


                                                                       tCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACTTCTGTTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAGCAGt                               >  1:1400289/1‑101 (MQ=255)


                                                                        ccccccGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACTTCTGTTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAGCAGTg                              <  2:1925906/101‑1 (MQ=255)


                                                                          ccccGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACTTCTGTTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAGCAGTggg                            >  1:1263790/1‑101 (MQ=255)


                                                                           cccGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACTTCTGTTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAGCAGTgggg                           <  1:1754707/101‑1 (MQ=255)


                                                                           cccGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACTTCTGTTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAGCAGTgggg                           <  1:3680976/101‑1 (MQ=255)


                                                                            ccGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACTTCTGTTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCAGTGGGGt                          >  1:470839/1‑101 (MQ=255)


                                                                             cgcgGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACTTCTGTTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAGCAGTGGGGTg                         <  2:4653714/101‑1 (MQ=255)


                                                                              gcgGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACTTCTGTTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAGCAGTGGGGTGa                        <  1:648554/101‑1 (MQ=255)


                                                                               cgGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACTTCTGTTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAGCAGTGGGGTGAg                       <  1:3725639/101‑1 (MQ=255)


                                                                               cgGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACTTCTGTTCGTCGCTCCCCCCGCGCGGGCGTGGATCGAACCAAGCAAAGGGATGAg                       >  2:3062802/1‑101 (MQ=38)


                                                                                  gggCGAGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACTTCTGTTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAGCAGTGGGGTGAGTgg                    <  2:929696/101‑1 (MQ=255)


                                                                                     cGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACTTCTGTTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAGCAGTGGGGTGAGTGGGCt                 <  2:2355142/101‑1 (MQ=255)


                                                                                     cGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACTTCTGTTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAGCAGTGGGGTGAGTGGGCt                 <  2:1871588/101‑1 (MQ=255)


                                                                                     cGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACTTCTGTTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAGCAGTGGGGTGAGTGGGCt                 <  2:702879/101‑1 (MQ=255)


                                                                                      gTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACTTCTGTTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAGCAGTGGGGTGAGTGGGCTg                <  2:4087573/101‑1 (MQ=255)


                                                                                       tGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACTTCTGTTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAGCAGTGGGGGGAGTGGGCTGa               >  2:883119/1‑101 (MQ=255)


                                                                                        ggATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACTTCTGTTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAGCAGTGGGGTGAGTGGGCTGAc              >  2:3742255/1‑101 (MQ=255)


                                                                                        ggATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACTTCTGTTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAGCAGTGGGGTGAGTGGGCTGAc              <  2:1696460/101‑1 (MQ=255)


                                                                                           tCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACTTCTGTTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAGCAGTGGGGTGAGTGGGCTGACCAg           <  2:2210240/101‑1 (MQ=255)


                                                                                           tCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACTTCTGTTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAAAAGCAGTGGGGTGAGTGGGCTGACCAg           >  1:170720/1‑101 (MQ=255)


                                                                                           acGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACTTCTGTTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAGCAGTGGGGTGAGTGGGCTGACCAg           <  2:204164/100‑1 (MQ=255)


                                                                                            cGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACTTCTGTTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGCAGTGGGGAGAGTGGGCTGACCAGa          >  2:1231625/1‑101 (MQ=255)


                                                                                            cGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACTTCTGTTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAGCAGTGGGGTGAGTGGGCTGACCAGa          <  1:4484411/101‑1 (MQ=255)


                                                                                            cGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACTTCTGTTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAGCAGTGGGGTGAGTGGGCTGACCAGa          >  1:1849796/1‑101 (MQ=255)


                                                                                            cGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACTTCTGTTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAGCAGTGGGGTGAGTGGGCTGACCAGa          >  1:1160798/1‑101 (MQ=255)


                                                                                              aaaCAGCAGGTCAGCCGCGGCCCCGGTGAACTTCTGTTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAGCAGTGGGGTGAGTGGGCTGACCAGACa        >  1:320245/1‑101 (MQ=255)


                                                                                               aaCAGCAGGTCAGCCGCGGCCCCGGTGAACTTCTGTTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAGCAGTGGGGTGAGTGGGCTGACCAGACaa       >  1:4018960/1‑101 (MQ=255)


                                                                                                aCAGCAGGTCAGCCGCGGCCCCGGTGAACTTCTGTTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAGCAGTGGGGTGAGTGGGCTGACCAGACaaa      >  1:524508/1‑101 (MQ=255)


                                                                                                 cagcagGTCAGCCGCGGCCCCGGTGAACTTCTGTTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAGCAGTGGGGTGAGTGGGCTGACCAGACAAAc     >  2:3381436/1‑101 (MQ=255)


                                                                                                 cagcagGTCAGCCGCGGCCCCGGTGAACTTCTGTTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAGCAGTGGGGTGAGTGGGCTGACCAGACAAAc     <  1:1345090/101‑1 (MQ=255)


CGCTCCCCCCGCGGGGGCGTGGATCGAAACCCGGCGAAAAACGGCCATGCCTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACTTCTGTTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAGCAGTGGGGTGAGTGGGCTGACCAGACAAACGCT  >  NC_014034/1396169‑1396369

Base quality scores:


ATCG

< 3 ≤


ATCG

< 19 ≤


ATCG

< 27 ≤


ATCG

< 33 ≤


ATCG

< 41 ≤


ATCG