New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 1395899 =187 (1.180)42 (0.260) 7/134 25.5 0.26 intergenic (+711/‑220) RCAP_rcc01306/RCAP_rcc01307 Cas2 family CRISPR‑associated protein/hypothetical protein
?NC_014034 = 1434647 48 (0.200)intergenic (‑426/‑532) RCAP_rcc01334/RCAP_rcc01335 hypothetical protein/Fis family GAF modulated sigma54 specific transcriptional regulator
Rejected: Position hash score below cutoff.

Only 100 of 114 total aligned reads displayed.

TCGCTCCCCCCGCGGGGGCGTGGATCGAAACGACGCG....CTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCTTTGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAA  >  NC_014034/1434548‑1434709
                                                                                                       |                                                              
tCGCTCCCCCCGCGGGGGCGTGGATCGAAACGACGCG....CTGAAGGAGGGTGATCTCGGGGGCGCCTTGTGGCTCCCCCCGCGGGGGCGTGGATCGAAACACg                                                               >  2:2097341/1‑101 (MQ=9)
  gCTCCCCCCGCGGGGGCGTGGATCGAAACGACGCG....CTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGa                                                             >  2:271542/1‑101 (MQ=32)
  gCTCCCCCCGCGGGGGCGTGGATCGAAACGACGCG....CTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGa                                                             >  1:28545/1‑101 (MQ=32)
  gCTCCCCCCGCGGGGGCGTGGATCGAAACGACGCG....CTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGGGGATCGAAACACGGa                                                             >  1:2558258/1‑101 (MQ=17)
   cTCCCCCCGCGGGGGCGTGGATCGAAACGACGCG....CTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGAt                                                            <  1:1313446/101‑1 (MQ=33)
   cTCCCCCCGCGGGGGCGTGGATCGAAACGACGCG....CTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGAt                                                            <  2:1659665/101‑1 (MQ=33)
   cTCCCCCCGCGGGGGCGTGGATCGAAACGACGCG....CTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGAt                                                            >  2:3411203/1‑101 (MQ=33)
    tCCCCCCGCGGGGGCGTGGATCGAAACGACGCG....CTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGAtt                                                           <  2:165082/101‑1 (MQ=34)
    tCCCCCCGCGGGGGCGTGGATCGAAACGACGCG....CTGAAGGAGGGTGATCTCGGGGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGaat                                                           >  2:1839841/1‑99 (MQ=14)
     ccccccGCGGGGGCGTGGATCGAAACGACGCG....CTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTg                                                          <  1:1435599/101‑1 (MQ=35)
     ccccccGCGGGGGCGTGGATCGAAACGACGCG....CTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTg                                                          <  1:370086/101‑1 (MQ=35)
     ccccccGCGGGGGCGTGGATCGAAACGACGCG....CTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTg                                                          <  1:242060/101‑1 (MQ=35)
     ccccccGCGGGGGCGTGGATCGAAACGACGCG....CTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTg                                                          <  1:266565/101‑1 (MQ=35)
      cccccGCGGGGGCGTGGATCGAAACGACGCG....CTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGc                                                         <  2:2564049/101‑1 (MQ=37)
       ccccGCGGGGGCGTGGATCGAAACGACGCG....CTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCa                                                        <  1:287340/101‑1 (MQ=38)
       ccccGCGGGGGCGTGGATCGAAACGACGCG....CTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCa                                                        <  1:3579414/101‑1 (MQ=38)
        cccGCGGGGGCGTGGATCGAAACGCCGCGGCGTCCCGAAGACGGTCTTCT.GGTGCCGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAacaccccgaa                                                          <  2:4174014/101‑7 (MQ=2)
        cccGCGGGGGCGTGGATCGAAACGACGCG....CTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCag                                                       >  2:1302661/1‑100 (MQ=38)
        cccGCGGGGGCGTGGATCGAAACGACGCG....CTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCAt                                                       <  1:2135139/101‑1 (MQ=39)
         ccGCGGGGGCGTGGATCGAAACGACGCG....CTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATg                                                      <  2:3038610/101‑1 (MQ=40)
         ccGCGGGGGCGTGGATCGAAACGACGCG....CTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATg                                                      <  1:4451132/101‑1 (MQ=40)
          cgcgGGGGCGTGGATCGAAACGACGCG....CTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATgg                                                     >  2:1888079/1‑101 (MQ=40)
          cgcgGGGGCGTGGATCGAAACGACGCG....CTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATgg                                                     >  2:1759990/1‑101 (MQ=40)
          cgcgGGGGCGTGGATCGAAACGACGCG....CTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATgg                                                     >  2:1888078/1‑101 (MQ=40)
           tcgGGGGCGGGGATCGAAACGACGCG....CTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGgc                                                    <  1:692231/100‑1 (MQ=255)
            cgGGGGCGTGGATCGAAACGACGCG....CTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGgcg                                                   >  2:2811175/1‑101 (MQ=255)
            cgGGGGCGTGGATCGAAACGACGCG....CTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGgca                                                   >  2:692169/1‑100 (MQ=255)
             gggggCGTGGATCGAAACGACGCG....CTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGgcgc                                                  >  1:3371605/1‑101 (MQ=255)
             gggggCGTGGATCGAAACGACGCG....CTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGgcgc                                                  >  1:2801948/1‑101 (MQ=255)
             gggggCGTGGATCGAAACGACGCG....CTGAAGGAGGGTGATCTCGGTGGCGCCTTGTAGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGgcgc                                                  >  2:1453956/1‑101 (MQ=255)
              ggggCGTGGATCGAAACGACGCG....CTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGcc                                                 >  2:1454711/1‑101 (MQ=255)
              ggggCGTGGATCGAAACGACGCG....CTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGcc                                                 <  1:192099/101‑1 (MQ=255)
               gggCGTGGATCGAAACGACGCG....CTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCg                                                >  2:3737392/1‑101 (MQ=255)
               gggCGTGGATCGAAACGACGCG....CTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCg                                                <  2:2706851/101‑1 (MQ=255)
                 gCGTGGATCGAAACGACGCG....CTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAg                                              >  1:3626420/1‑101 (MQ=255)
                 gCGTGGATCGAAACGACGCG....CTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAg                                              >  2:2931904/1‑101 (MQ=255)
                   gTGGATCGAAACGACGCG....CTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAggg                                            <  2:2168107/101‑1 (MQ=255)
                    tGGATCGAAACGACGCG....CTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGa                                           >  2:4239298/1‑101 (MQ=255)
                    tGGATCGAAACGACGCG....CTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGa                                           <  2:28539/101‑1 (MQ=255)
                      gATCGAAACGACGCG....CTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACa                                         <  1:1743313/101‑1 (MQ=255)
                      gATCGAAACGACGCG....CTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACa                                         >  2:2850462/1‑101 (MQ=255)
                       aTCGAAACGACGCG....CTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAg                                        >  2:4372543/1‑101 (MQ=255)
                         cGAAACGACGCG....CTGAAGGGGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGc                                      <  2:3495367/101‑1 (MQ=255)
                         cGAAACGACGCG....CTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGc                                      >  2:4278168/1‑101 (MQ=255)
                          gAAACGACGCG....CTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCt                                     >  1:4533531/1‑101 (MQ=255)
                           aaaCGACGCG....CTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCtt                                    >  1:2793425/1‑101 (MQ=255)
                           aaaCGACGCG....CTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCtt                                    >  2:4117545/1‑101 (MQ=255)
                            aaCGACGCG....CTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGGCAGGCttt                                   >  2:4163287/1‑101 (MQ=255)
                            aaCGACGCG....CTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCttt                                   >  1:542994/1‑101 (MQ=255)
                            aaCGACGCG....CTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCttt                                   >  2:3968383/1‑101 (MQ=255)
                             acgacgCG....CTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCTTTg                                  >  2:1949789/1‑101 (MQ=255)
                             acgacgCG....CTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCTTTg                                  <  2:1610667/101‑1 (MQ=255)
                              cgacgCG....CTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCTTTGc                                 <  1:2227315/101‑1 (MQ=255)
                              cgacgCG....CTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCTTTGc                                 <  1:271574/101‑1 (MQ=255)
                              cgacgCG....CTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCTTTGc                                 <  1:4045600/101‑1 (MQ=255)
                              cgacgCG....CTGAAGGAGGGTGAGCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCTTTGc                                 <  1:1760109/101‑1 (MQ=255)
                               gtcgcg....CTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCTTTGCa                                <  2:1853516/99‑1 (MQ=255)
                               gacgCG....CTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCTTTGCa                                <  2:2271675/101‑1 (MQ=255)
                                 cgcg....CTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCTTTGCAGt                              <  2:1486603/101‑1 (MQ=255)
                                  gcg....cTGAAGTTCGTTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCTTTGCAGTc                             <  2:2731440/101‑1 (MQ=17)
                                   cg....cTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCTTTGCAGTCg                            >  1:671841/1‑101 (MQ=255)
                                   cg....cTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCTTTGCAGTCg                            <  1:3875450/101‑1 (MQ=255)
                                   cg....cTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCTTTGCAGTCg                            >  2:2325862/1‑101 (MQ=255)
                                    g....cTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCTTTGCAGTCGc                           >  2:4429439/1‑101 (MQ=255)
                                         cTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCTTTGCAGTCGCt                          <  2:1897463/101‑1 (MQ=255)
                                         cTGAAGGAGGGTGATCCCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCTTTGCAGTCGCt                          <  2:1486383/101‑1 (MQ=255)
                                          tGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCTTTGCAGTCGCTc                         >  2:1594232/1‑101 (MQ=255)
                                           gatggaggGTGATCTCGATGTCACCTTGTCGCTCCCCCCGCGGGGGCGTGGATGGAAACACGGATTGCATGGCGCCGAGGGACAGGCTTTGCAGTCGCTcc                        <  2:789266/98‑1 (MQ=14)
                                           gAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCTTTGCAGTCGCTcc                        >  2:4092391/1‑101 (MQ=255)
                                           gAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCTTTGCAGTCGCTcc                        >  1:1906283/1‑101 (MQ=255)
                                            aaGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCTTTGCAGTCGCTccc                       <  1:3363190/101‑1 (MQ=255)
                                            aaGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCTTTGCAGTCGCTccc                       <  1:827614/101‑1 (MQ=255)
                                            aaGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCTTTGCAGTCGCTccc                       >  2:613990/1‑101 (MQ=255)
                                            aaGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCTTTGCAGTCGCTccc                       >  2:4223486/1‑101 (MQ=255)
                                            aaGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCTTTGCAGTCGCTccc                       <  1:4171363/101‑1 (MQ=255)
                                             aggaggGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCTTTGCAGTCGCTcccc                      >  2:371142/1‑101 (MQ=255)
                                               gaggGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGTGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCTTTGCAGTCGCTcccccc                    >  2:2382730/1‑101 (MQ=255)
                                               gaggGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCTTTGCAGTCGCTcccccc                    >  1:347187/1‑101 (MQ=255)
                                               gaggGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCTTTGCAGTCGCTcccccc                    <  2:1345442/101‑1 (MQ=255)
                                                aggGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCTTTGCAGTCGCTccccccc                   >  2:411608/1‑100 (MQ=255)
                                                aggGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCTTTGCAGTCGCTCCCCCcg                   <  1:3108467/101‑1 (MQ=255)
                                                aggGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCTTTGCAGTCGCTCCCCCcg                   >  2:1856823/1‑101 (MQ=255)
                                                   gTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCTTTGCACTCGGTGCCCCCGCgg                >  2:2231995/1‑101 (MQ=255)
                                                    tGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGCCAGGCTTTGCCGTCGCTCCCCCCGCggg               >  2:4081385/1‑101 (MQ=255)
                                                     gATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCTTTGCAGTCGCTCCCCCCGCgggg              <  1:2705402/101‑1 (MQ=255)
                                                     gATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCTTTGCAGTCGCTCCCCCCGCgggg              <  1:790069/101‑1 (MQ=255)
                                                      aTCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCTTTGCAGTCGCTCCCCCCGCggggg             <  2:1471006/101‑1 (MQ=255)
                                                       tctcGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGGCAGGCTTTGCAGTCGCTCCCCCCGCGGGGGc            >  2:80304/1‑101 (MQ=255)
                                                        ctcGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCTTTGCAGTCGCTCCCCCCGCGGGGGCg           >  2:1260332/1‑101 (MQ=40)
                                                         tcGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCTTTGCAGTCGCTCCCCCCGCGGGGGCGt          >  1:4271953/1‑101 (MQ=39)
                                                          cGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCTTTGCAGTCGCTCCCCCCGCGGGGGCGTg         <  2:3661717/101‑1 (MQ=38)
                                                           ggTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCTTTGCAGTCGCTCCCCCCGCGGGGGCGTgg        >  1:2379208/1‑101 (MQ=37)
                                                           ggTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCTTTGCAGTCGCTCCCCCCGCGGGGGCGTgg        >  1:4378314/1‑101 (MQ=37)
                                                            ggggCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCTTTGCAGTCGCTCCCCCCGCGGGGGCGTGGa       <  1:1640399/99‑1 (MQ=18)
                                                            gTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCTTTGCAGTCGCTCCCCCCGCGGGGGCGGGGa       >  2:3284553/1‑101 (MQ=25)
                                                             tGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCTTTGCAGTCGCTCCCCCCGCGGGGGCGTGGAt      >  1:1346536/1‑101 (MQ=34)
                                                               gcgcCTTGTCGCTCCCCCCGCGGGGGCGTGGATTGAAACACGGATTGCATGGCGCCGAGGGACAGGCTTTGCAGTCGCTCCCCCCGCGGGGGCGTGGATCg    <  1:4041278/101‑1 (MQ=17)
                                                               gcgcCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCTTTGCAGTCGCTCCCCCCGCGGGGGCGTGGATCg    >  1:2331699/1‑101 (MQ=32)
                                                               gcgcCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCTTTGCAGTCGCTCCCCCCGCGGGGGCGTGGATCg    <  2:1288095/101‑1 (MQ=32)
                                                                 gcCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCTTTGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGaa  <  2:3296297/101‑1 (MQ=11)
                                                                                                       |                                                              
TCGCTCCCCCCGCGGGGGCGTGGATCGAAACGACGCG....CTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACGGATTGCATGGCGCCGAGGGACAGGCTTTGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAA  >  NC_014034/1434548‑1434709

Base quality scores:  ATCG  < 3 ≤  ATCG  < 18 ≤  ATCG  < 27 ≤  ATCG  < 33 ≤  ATCG  < 40 ≤  ATCG