BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	= 1396132	148 (0.930)	32 (0.200)	7/134	25.5	0.18	coding (14/1578 nt)	RCAP_rcc01307	hypothetical protein
*	?	NC_014034	1397903 =	144 (0.610)	32 (0.200)	7/134	25.5	0.18	intergenic (+207/+1691)	RCAP_rcc01307/RCAP_rcc01309	hypothetical protein/IS66 family transposase
Rejected: Position hash score below cutoff.

Only 100 of 232 total aligned reads displayed.


CAGCGTCACATGCAGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATGGGAGGCTAGGGAGGCTACGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACC  >  NC_014034/1397804‑1398003


cAGCGTCACATGCAGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGt                                                                                                     <  1:3098531/101‑1 (MQ=255)


cAGCGTCACATGCAGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGt                                                                                                     >  1:2296803/1‑101 (MQ=255)


  gCGTCACATGCAGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCg                                                                                                   <  2:2792113/101‑1 (MQ=255)


  gCGTCACATGCAGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCg                                                                                                   >  1:2997647/1‑101 (MQ=255)


    gTCACATGCAGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCt                                                                                                 >  1:651283/1‑101 (MQ=255)


    gTCACATGCAGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCt                                                                                                 <  1:2084021/101‑1 (MQ=255)


     tCACATGCAGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTc                                                                                                <  2:496797/101‑1 (MQ=255)


       acaTGCAGCGGCGTCGTATCGCCATGTCGCCCCCCCCGCGGGTGCGTGGATCGAAAC.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTccc                                                                                              <  2:203155/101‑1 (MQ=255)


          tGCAGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTcccccc                                                                                           <  1:4506552/101‑1 (MQ=255)


          tGCAGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTcccccc                                                                                           <  1:4411794/101‑1 (MQ=255)


           gCAGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTccccccc                                                                                          >  1:4106671/1‑100 (MQ=255)


           gCAGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCcg                                                                                          <  2:1863348/101‑1 (MQ=255)


           gCAGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCcg                                                                                          <  1:280883/101‑1 (MQ=255)


             aGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCcgcg                                                                                        >  2:4329540/1‑101 (MQ=255)


                ggcgTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCgggg                                                                                     <  2:317970/101‑1 (MQ=255)


                ggcgTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCgggg                                                                                     >  1:3251769/1‑101 (MQ=255)


                ggcgTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCgggg                                                                                     <  1:386495/101‑1 (MQ=255)


                   gTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCg                                                                                  <  1:1082764/101‑1 (MQ=255)


                   gTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTACCCCCGCGGGGGCg                                                                                  >  2:1337153/1‑101 (MQ=255)


                    tCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGt                                                                                 <  1:1551712/101‑1 (MQ=255)


                     cGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTg                                                                                <  1:3781734/101‑1 (MQ=255)


                     cGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTg                                                                                <  1:46576/101‑1 (MQ=255)


                     cGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTg                                                                                <  1:1051275/101‑1 (MQ=255)


                     cGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTg                                                                                <  1:2589635/101‑1 (MQ=255)


                       cATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGa                                                                              >  1:2923185/1‑101 (MQ=255)


                       cATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGa                                                                              <  2:345847/101‑1 (MQ=255)


                        aTCGCCATGTCGCTCCCCCCGCGGGGGCGTGGAGCGAAAC.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGAt                                                                             <  1:4032821/101‑1 (MQ=255)


                         tCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATc                                                                            <  1:2864674/101‑1 (MQ=255)


                         tCGCCATGTCGCTCCCCCCGCGGGGGCGTCGATCAAACC.CCGGCAC..CTCAGCCCCCCCCCCTGTCGCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATc                                                                            <  2:3665611/101‑1 (MQ=25)


                         cgatcttGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATc                                                                            <  2:839584/95‑1 (MQ=255)


                            ccATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGACGCTCCCCCCCCGGGGGCGCGGATCGaa                                                                         >  1:574715/1‑101 (MQ=255)


                             ggcgTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CCGCCACGTCTTGGAACAGCGCGCCAT.TGGCC.CCGGTCGCTCCCCCCGCGGGGGCGTGGATCGaaa                                                                        >  1:482172/4‑101 (MQ=2)


                             ggcctCGCCCCCCCCGCGGGGGCGTGGATCGAACC.CCGCCACGTCTTGGAACAGCGTGCTAT.TGGCC.CCGGTCGCTCCCCCCGCGGGGGCGTGGATCGaaa                                                                        <  2:1082909/97‑1 (MQ=2)


                             cATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGaaa                                                                        >  2:4240862/1‑101 (MQ=255)


                             cATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGaaa                                                                        >  2:357511/1‑101 (MQ=255)


                               tGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGGGGGTcagatcg                                                                      >  1:839660/1‑95 (MQ=37)


                                gTCGCTCCCCCCGCGGGGGCGTGGATCGAAGC.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCCCCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAActc                                                                     <  2:3562664/101‑1 (MQ=255)


                                 tCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAActct                                                                    <  2:219608/101‑1 (MQ=255)


                                     tCCCCCCGCGGGGGCGTGGATCGAAAC.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATgg                                                                >  1:2785321/1‑101 (MQ=255)


                                     tCCCCCCGCGGGGGCGTGGATCGAAAC.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATgg                                                                <  1:983300/101‑1 (MQ=255)


                                     tCCCCCCGCGGGGGCGTGGATCGAAAC.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATgg                                                                >  1:37095/1‑101 (MQ=255)


                                       cccccGCGGGGGCGTGGATCGAAACACCAATGC..CGAAGCCAAGGCCGCAGCAGCGTCTGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAcaaaaagcc                                                               >  1:3924347/1‑93 (MQ=0)


                                       cccccGCGGGGGCGTGGATCGAAAC.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATggga                                                              <  2:678333/101‑1 (MQ=255)


                                        ccccGCGGGGGCGTGGATCGAAAC.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATgggag                                                             <  1:4176870/101‑1 (MQ=255)


                                        ccccGCGGGGGCGTGGATCGAAAC.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATgggag                                                             <  1:4329832/101‑1 (MQ=255)


                                          ccGCGGGGGCGTGGATCGAAAC.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATgggaggc                                                           >  1:1160269/1‑101 (MQ=255)


                                           cgcgGGGGCGTGGATCGAAAC.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATgggaggct                                                          <  2:4350184/101‑1 (MQ=255)


                                            gcgGGGGCGTGGATCGAAAC.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATgggaggcta                                                         >  2:4114109/1‑101 (MQ=255)


                                             cgGGGGCGTGGATCGAAAC.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATgggaggctag                                                        >  2:623629/1‑101 (MQ=255)


                                                  gCGTGGATCGAAAC.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATgggaggctagggagg                                                   <  2:4118583/101‑1 (MQ=255)


                                                  gCGTGGATCGAAAC.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATgggaggctagggagg                                                   >  2:234698/1‑101 (MQ=255)


                                                   cGTGGATCGAAAC.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATgggcggctagggaggc                                                  >  2:1153129/1‑101 (MQ=255)


                                                   cGTGGATCGAAAC.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATgggaggctagggaggc                                                  >  2:1444525/1‑101 (MQ=255)


                                                   cGTGGATCGAAAC.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATgggaggctagggaggc                                                  >  1:4278602/1‑101 (MQ=255)


                                                    gTGGATCGAAAC.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAATTCTATggggggctagggaggct                                                 >  2:2530998/1‑101 (MQ=255)


                                                    gTGGATCGAAAC.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATgggaggctagggaggct                                                 <  1:4462904/101‑1 (MQ=255)


                                                     tGGATCGAAAC.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATgggaggctagggaggcta                                                >  2:4452062/1‑101 (MQ=255)


                                                      ggATCGAAAC.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATGGGAGGCTAGGGAGGCTAc                                               <  1:1966589/101‑1 (MQ=255)


                                                      ggATCGAAAC.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATGGGAGGCTAGGGAGGCTAc                                               >  2:2285639/1‑101 (MQ=255)


                                                      ggATCGAAAC.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATGGGAGGCTAGGGAGGCTAc                                               >  2:3045109/1‑101 (MQ=255)


                                                       gATCGAAAC.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATGGGAGGCTAGGGAGGCTACg                                              <  1:1475859/101‑1 (MQ=255)


                                                          cGAAAC.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATGGGAGGCTAGGGAGGCTACGCAc                                           >  1:2964402/1‑101 (MQ=255)


                                                           gAAAC.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATGGGAGGCTAGGGAGGCTACGCAcc                                          >  2:899211/1‑101 (MQ=255)


                                                            aaaC.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATGGGAGGCTAGGGAGGCTACGCACCt                                         >  1:2458179/1‑101 (MQ=255)


                                                             aaC.CCGGCAC..CTCAGCCCCGCCGGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATGGGAGGCTAGGGAGGCTACGCACCtt                                        <  2:772075/101‑1 (MQ=255)


                                                               c.ccGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATGGGAGGCTAGGGAGGCTACGCACCTTCa                                      <  1:3972157/101‑1 (MQ=255)


                                                                 ccGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATGGGAGGCTAGGGAGGCTACGCACCTTCaa                                     <  2:1939937/101‑1 (MQ=255)


                                                                   ggCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATGGGAGGCTAGGGAGGCTACGCACCTTCaaaa                                   <  2:1722443/101‑1 (MQ=255)


                                                                   ggCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGCGGATCGAAACTCTATGGGAGGCTAGGGAGGCTACGCACCTTCaaaa                                   <  2:4030613/101‑1 (MQ=255)


                                                                    gCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATGGGAGGCTAGGGAGGCTACGCACCTTCAAAAg                                  >  1:1536681/1‑101 (MQ=255)


                                                                     cAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATGGGAGGCTAGGGGAGCTACGCACCTTCAAAAGt                                 >  2:563080/1‑101 (MQ=255)


                                                                     cAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATGGGAGGCTAGGGAGGCTACGCACCTTCAAAAGt                                 <  2:4087860/101‑1 (MQ=255)


                                                                     cAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATGGGAGGCTAGGGAGGCTACGCACCTTCAAAAGt                                 >  1:2221695/1‑101 (MQ=255)


                                                                     cAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATGGGAGGCTAGGGAGGCTACGCACCTTCAAAAGt                                 <  2:1547175/101‑1 (MQ=255)


                                                                       c..cTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATGGGAGGCTAGGGAGGCTACGCACCTTCAAAAGTCg                               >  1:2637292/1‑101 (MQ=255)


                                                                            cAGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATGGGAGGCTAGGGAGGCTACGCACCTTCAAAAGTCGCTc                            <  2:3323767/101‑1 (MQ=255)


                                                                             aGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATGGGAGGCTAGGGAGGCTACGCACCTTCAAAAGTCGCTcc                           <  1:1827272/101‑1 (MQ=255)


                                                                              gCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATGGGAGGCTAGGGAGGCTACGCACCTTCAAAAGTCGCTccc                          >  1:2015765/1‑101 (MQ=255)


                                                                              gCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATGGGAGGCTAGGGAGGCTACGCACCTTCAAAAGTCGCTccc                          <  1:1900744/101‑1 (MQ=255)


                                                                               ccccGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATGGGAGGCTAGGGAGGCTACGCACCTTCAAAAGTCGCTcccc                         <  2:3843288/101‑1 (MQ=255)


                                                                               ccccGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATGGGAGGCTAGGGAGGCTACGCACCTTCAAAAGTCGCTcccc                         <  2:2878572/101‑1 (MQ=255)


                                                                                 ccgcccgcTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATGGGAGGCTAGGGAGGCTACGCACCTTCAAAAGTCGCTcccccc                       <  2:3243515/101‑1 (MQ=255)


                                                                                 ccgcccgcTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATGGGAGGCTAGGGAGGCTACGCACCTTCAAAAGTCGCTcccccc                       <  1:357548/101‑1 (MQ=255)


                                                                                  cgcccgcTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATGGGAGGCTAGGGAGGCTACGCACCTTCAAAAGTCGCTCCCCCcg                      <  1:419774/101‑1 (MQ=255)


                                                                                     ccgcTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATGGGAGGCTAGGGAGGCTACGCACCTTCAAAAGTCGCTCCCCCCGCgg                   >  2:2550986/1‑101 (MQ=255)


                                                                                     ccgcTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATGGGAGGCTAGGGAGGCTACGCACCTTCAAAAGTCGCTCCCCCCCCgg                   <  2:3951668/101‑1 (MQ=255)


                                                                                       gcTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATGGGAGGCTAGGGAGGCTACGCACCTTCAAAAGTCGCTCCCCCCGCgggg                 <  2:4277920/101‑1 (MQ=255)


                                                                                           tctcACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATGGGAGGCTAGGGAGGCTACGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGt             >  1:1000050/1‑101 (MQ=255)


                                                                                            ctcACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATGGGAGGCTAGGGAGGCTACGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTg            <  1:1743379/101‑1 (MQ=255)


                                                                                             tcACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATGGGAGGCTAGGGAGGCTACGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTgg           >  2:4579322/1‑101 (MQ=255)


                                                                                             tcACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATGGGAGGCTAGGGAGGCTACGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTgg           >  1:891466/1‑101 (MQ=255)


                                                                                             tcACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATGGGAGGCTAGGGAGGCTACGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTgg           >  1:732801/1‑101 (MQ=255)


                                                                                             tcACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATGGGAGGCTAGGGAGGCTACGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTgg           >  1:235897/1‑101 (MQ=255)


                                                                                             tcACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATGGGAGGCTAGGGAGGATACGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTgg           <  1:3483763/101‑1 (MQ=255)


                                                                                               aCCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATGGGAGGCTAGGGAGGCTACGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGAt         <  2:4619011/101‑1 (MQ=255)


                                                                                                ccAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATGGGAGGCTAGGGAGGCTACGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATc        <  1:776834/101‑1 (MQ=255)


                                                                                                    cAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATGGGAGGCTAGGGAGGCTACGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGaaa    >  2:4506025/1‑101 (MQ=255)


                                                                                                     aGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATGGGAAGCTAGGGAGGCTACGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAc   >  2:2383897/1‑101 (MQ=255)


                                                                                                      gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATGGGAGGCTAGGGAGGCTACGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAcc  >  2:3650050/1‑101 (MQ=255)


                                                                                                      gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATGGGAGGCTAGGGAGGCTACGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAcc  <  2:1651135/101‑1 (MQ=255)


CAGCGTCACATGCAGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATGGGAGGCTAGGGAGGCTACGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACC  >  NC_014034/1397804‑1398003

Base quality scores:


ATCG

< 3 ≤


ATCG

< 20 ≤


ATCG

< 27 ≤


ATCG

< 33 ≤


ATCG

< 40 ≤


ATCG