New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 1397271163 (1.010)51 (0.320) 12/136 21.8 0.23 coding (1153/1578 nt) RCAP_rcc01307 hypothetical protein
?NC_014034 1397434 = 179 (0.750)coding (1316/1578 nt) RCAP_rcc01307 hypothetical protein
Rejected: Position hash score below cutoff.

Only 100 of 272 total aligned reads displayed.

GCTTTACAGCCTTCGCGCCCCACGCCAGACGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTTCAATGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAA  >  NC_014034/1397334‑1397533
                                                                                                    |                                                                                                      
gCTTTACAGCCTTCGCGCCCCACGCCAGACNGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTTCAATGGATATGGCAAAACCGTCCGCGACATg                                                                                                        <  1:1240132/101‑1 (MQ=255)
gCTTTACAGCCTTCGCGCCCCACGCCAGACGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTTCAATGGATATGGCAAAACCGTCCGCGACATg                                                                                                        >  1:2928875/1‑101 (MQ=255)
gCTTTACAGCCTTCGCGCCCCACGCCAGACGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTTCAATGGATATGGCAAAACCGTCCGCGACATg                                                                                                        <  2:834670/101‑1 (MQ=255)
   ttACAGCCTTCGCGCCCCACGCCAGACGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTTCAATGGATATGGCAAAACCGTCCGCGACATGTCg                                                                                                     <  1:4627774/101‑1 (MQ=255)
    tACAGCCTTCGCGCCCCACGCCAGACGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTTCAATGGATATGGCAAAACCGTCCGCGACATGTCGc                                                                                                    >  1:699516/1‑101 (MQ=255)
     accgCCTTCGCGCCCCACGCCAGACGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTTTCAATGGATATGGCAAAACCGCCCGCGACATGTCGCt                                                                                                   >  2:2809146/4‑101 (MQ=38)
       aGCCTTCGCGCCCCACGCCAGACGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTTCAATGGATATGGCAAAACCGTCCGCGACATGTCGCTcc                                                                                                 >  1:3517453/1‑101 (MQ=255)
         ccTTCGCGCCCCACGCCAGACGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTTCAATGGATATGGCAAAACCGTCCGCGACATGTCGCTcccc                                                                                               >  1:3078439/1‑101 (MQ=255)
          cTTCGCGCCCCACGCCAGACGGGCGTCGCGCCCCCCGCGGGGGCGTGGATCGAAACTCTTCAATGGATATGGCAAAACCGTCCGCGACATGTCGCTccccc                                                                                              <  1:3873938/101‑1 (MQ=255)
          cTTCGCGCCCCACGCCAGACGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTTCAATGGATATGGCAAAACCGGCCGCGACATGTCGCTgcccc                                                                                              >  2:321385/1‑101 (MQ=255)
              gcgcCCCACGCCAGACGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTTCAATGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCcgcg                                                                                          <  2:2592124/101‑1 (MQ=255)
                 ccccCCGCCAGACGGACGTCGCCCCCCCCGCGGGGGCGTGGATCGAAACTCTTCAATGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCgggg                                                                                       <  2:3376228/101‑1 (MQ=255)
                   ccACGCCAGACGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTTCAATGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGc                                                                                     <  2:2008337/101‑1 (MQ=255)
                   ccACGCCAGACGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTTCAATGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGc                                                                                     <  1:2797891/101‑1 (MQ=255)
                   ccACGCCAGACGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTTCAATGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGc                                                                                     <  2:920202/101‑1 (MQ=255)
                     ccGCCAGACGGACGTCGCTCCCCCCGTGGGGGCGTGGATCGAAACTCTTCAATGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGt                                                                                   <  2:1710565/100‑1 (MQ=255)
                         cAGACGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTTCAATGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGAt                                                                               >  1:364844/1‑101 (MQ=255)
                         cAGACGGACGTCGCTCCCCCCGCGGGGGCGTGGATAGAAACTCTTCAATGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCTCCGGGGCGGGGAt                                                                               >  2:1539883/1‑101 (MQ=37)
                          ggccggacgTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTTCAATGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATc                                                                              <  2:4403684/98‑1 (MQ=255)
                          aGACGGACGTCGCTCGCCCCGCGGGGGCGCCGATCGACACTCTTAAATGGATATGGAAGAACCCCCCCCGACATGTCGCGCCCGCCGCGGGGGCgggaata                                                                              >  2:3548652/1‑95 (MQ=255)
                          aGACGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTTCAATGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATc                                                                              <  1:3118182/101‑1 (MQ=255)
                           gacggacgTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTTCAATGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCg                                                                             <  2:593874/101‑1 (MQ=255)
                             cggacgTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTTCAATGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGaa                                                                           <  2:3455469/101‑1 (MQ=255)
                                  gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTTCAATGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAcc                                                                      >  2:1398930/1‑101 (MQ=255)
                                      cTCCCCCCGCGGGGGCGTGGATCGAAACTCTTCAATGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.tca                                                                 >  2:1822180/1‑101 (MQ=255)
                                       tCCCCCCGCGGGGGCGTGGATCGAAACTCTTCAATGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.tcat                                                                >  1:102455/1‑101 (MQ=255)
                                       cccccccGCGGGGGCGTGGATCGAAACTCTTCAATGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.tcat                                                                <  2:1199491/100‑1 (MQ=255)
                                        ccccccGCGGGGGCGTGGATAGAAACTCTCCAATGGGTATGGCAAAACCGCCCGCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.tcatc                                                               <  2:3502619/101‑1 (MQ=21)
                                         cccccGCGGGGGCGTGGATCGAAACTCTTCAATGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.tcatc.a                                                             <  1:1399025/101‑1 (MQ=255)
                                           cccGAGGGGGCGTGGATCGAAACTCTTCAATGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATc.acc                                                           <  1:4139572/101‑1 (MQ=255)
                                            ccGCGGGGGCGTGGATCGAAACTCTTCAATGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATc.acca                                                          <  1:1184675/101‑1 (MQ=255)
                                            ccGCGGGGGCGTGGATCGAAACTCTTCAATGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGGGGATCGAAAAACCG.ccacccccc                                                           >  1:2602328/1‑95 (MQ=37)
                                              gcgGGGGCGTGGATCGAAACTCTTCAATGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACg                                                        >  1:3893994/1‑101 (MQ=255)
                                              gcgGGGGCGTGGATCGAAACTCTTCAATGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACg                                                        >  1:4172976/1‑101 (MQ=255)
                                                gggggCTTGTATCGAAACTCTTCAATGGATATGCCAAACCCGTCCGCGACATGTCGCCCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCa                                                      <  2:4256213/101‑1 (MQ=38)
                                                gggggCGTGGATCGAAACTCTTCAATGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCa                                                      <  1:851775/101‑1 (MQ=255)
                                                  gggCGTGGATCGAAACTCTTCAATGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.c                                                   >  2:157749/1‑101 (MQ=255)
                                                   ggCGTGGATCGAAACTCTTCAATGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.cc                                                  <  1:1885829/101‑1 (MQ=255)
                                                   ggCGTGGATCGAAACTCTTCAATGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.CCATC.ACCACGCAA.cc                                                  >  2:2559721/1‑101 (MQ=255)
                                                   ggCGTGGATCGAAACTCTTCAATGGATATGGCAAAAACGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAACCACAG.CCAAC.ACCACGCAA.cc                                                  >  2:3282810/1‑101 (MQ=38)
                                                    gCGTGGATCGAAACTCTTCAATGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCg                                                 <  1:2988777/101‑1 (MQ=255)
                                                    gCGTGGATCGAAACTCTTCAATGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCg                                                 <  2:1672134/101‑1 (MQ=255)
                                                     cGTGGATCGAAACTCTTCAATGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGc                                                >  2:106298/1‑101 (MQ=255)
                                                      gTGGATCGAAACTCTTCAATGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGcc                                               >  1:1742363/1‑101 (MQ=255)
                                                       tGGATCGAAACTCTTCAATGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGccc                                              >  2:2720155/1‑101 (MQ=255)
                                                       tGGATCGAAACTCTTCAATGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGccc                                              <  2:2025561/101‑1 (MQ=255)
                                                        ggATCGAAACTCTTCAATGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCt                                             >  1:116073/1‑101 (MQ=255)
                                                        ggATCGAAACTCTTCAATGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCt                                             >  1:3237823/1‑101 (MQ=255)
                                                        ggATCGAAACTCTTCAATGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCt                                             >  1:3011685/1‑101 (MQ=255)
                                                          aTCGAAACTCTTCAATGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGc                                           >  1:2678664/1‑101 (MQ=255)
                                                             gAAACTCTTCAATGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGcacc                                        >  2:2680275/1‑101 (MQ=255)
                                                             gAAACTCTTCAATGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGcacc                                        >  2:3994350/1‑101 (MQ=255)
                                                              aaaCTCTTCAATGGATATTGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGcacca                                       >  1:3291423/1‑101 (MQ=255)
                                                              aaaCTCTTCAATGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGCCG.TCATC.ACCACGCAA.CCGCCCTGcacca                                       <  1:544514/101‑1 (MQ=255)
                                                              aaaCTCTTCAATGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGcacca                                       >  1:4222761/1‑101 (MQ=255)
                                                              aaaCTCTTCAATGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGcacca                                       >  2:3086023/1‑101 (MQ=255)
                                                                  tctTCAATGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCgg                                   >  1:1906824/1‑101 (MQ=255)
                                                                  tctTCAATGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCgg                                   <  1:4328869/101‑1 (MQ=255)
                                                                  tctTCAATGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCgg                                   <  2:1903258/101‑1 (MQ=255)
                                                                   ctTCAATGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCGGt                                  <  2:2209123/101‑1 (MQ=255)
                                                                   ctTCAATGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCGGt                                  >  1:3382523/1‑101 (MQ=255)
                                                                    ttCAATGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCGGTc                                 >  1:1125728/1‑101 (MQ=255)
                                                                     tCAATGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCGGTCg                                >  1:4549593/1‑101 (MQ=255)
                                                                      cAATGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCGGTCGc                               <  2:3011456/101‑1 (MQ=255)
                                                                      cAATGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCGGTCGc                               >  1:3230188/1‑101 (MQ=255)
                                                                       aaTGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCGGTCGCt                              <  2:288436/101‑1 (MQ=255)
                                                                        aTGTATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAC.CCGCCCTGCACCACCGGTCGCTc                             <  2:699441/101‑1 (MQ=255)
                                                                        aTGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCGGTCGCTc                             >  1:202947/1‑101 (MQ=255)
                                                                          ggATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCGGTCGCTccc                           >  2:559170/1‑101 (MQ=255)
                                                                           gATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCGGTCGCTcccc                          >  2:4333605/1‑101 (MQ=255)
                                                                            atatGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCGGTCGCTccccc                         >  1:3738694/1‑101 (MQ=255)
                                                                              atGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCGGTCGCTCCCCCcg                       <  2:1924332/101‑1 (MQ=255)
                                                                                ggCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCGGTCGCTCCCCCcgcg                     <  1:4395054/101‑1 (MQ=255)
                                                                                  cAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCGGTCGCTCCCCCCGCggg                   >  1:2175706/1‑101 (MQ=255)
                                                                                   aaaaCCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCGGTCGCTCCCCCCGCgggg                  >  1:1591412/1‑101 (MQ=255)
                                                                                   aaaaCCGGCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCGGTCGCTCCCCCCGCtggg                  <  2:3249606/101‑1 (MQ=255)
                                                                                    aaaCCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCGGTCGCTCCCCCCGCggggg                 <  2:2308665/101‑1 (MQ=255)
                                                                                    aaaCCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCGGTCGCTCCCCCCGCggggg                 >  2:4544727/1‑101 (MQ=255)
                                                                                      aCCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCg               >  2:4143340/1‑101 (MQ=255)
                                                                                       ccGTCCGCGACATGTCGCCCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACAGGTCGCTCCCCCCGCGGGGGCGt              <  1:2258795/101‑1 (MQ=255)
                                                                                        cGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTg             <  1:4257348/101‑1 (MQ=255)
                                                                                         gTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTgg            <  2:1269005/101‑1 (MQ=255)
                                                                                          ccgataccgcgTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCGATGATCAAATCCGCAATCGGCCGGGCTCGATC.GTCGCTCCCCCCGCGGGGGCGTg             <  2:2099562/91‑1 (MQ=0)
                                                                                           ccGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGAt          <  2:3620367/101‑1 (MQ=255)
                                                                                            cgcgACATGTCCCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATc         <  2:3358564/101‑1 (MQ=255)
                                                                                             gcgACCGGTCGCTCCCCCCGCGGGGGCGTGGATAGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCg        <  1:3998045/101‑1 (MQ=255)
                                                                                             ataccgcgTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCGATGATCAAATCCGCAATCGGCCGGGCTCGATC.GTCGCTCCCCCCGCGGGGGCGTGGAt          <  2:2358821/94‑1 (MQ=2)
                                                                                             ataccgcgTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCGATGATCAAATCCGCAATCGGCCGGGCTCCATC.GTCGCTCCCCCCGCGGGGGCGGggcc          >  1:431979/8‑99 (MQ=0)
                                                                                              taccgcgTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCGATGATCAAATCCGCAATCGGCCGGGCTCGATC.GTCGCTCCCCCCGCGGGGGCGTGGATc         <  1:1089039/95‑1 (MQ=2)
                                                                                              taccgcgTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCGATGATCAAATCCGCAATCGGCCGGGCTCGATC.GTCGCTCCCCCCGCGGGGGCGGGGATc         >  2:4016980/7‑101 (MQ=0)
                                                                                               gACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGaa      >  2:3855896/1‑101 (MQ=255)
                                                                                               gACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAAACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCGGTCCCTCCCCCCGCGCGGGCGTGGATCGaa      >  2:730114/1‑101 (MQ=255)
                                                                                               accgcgTCGCTCCCCCCGAGGGGGCGTGGATCGAAACATCGATGATCAAATCCGCAATCGGCCGGGCTCGATC.GTCGCTCCCCCCGCGGGGGCGTGGATCg        <  1:974879/96‑1 (MQ=2)
                                                                                                 cgcgTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCGATGATCAAATCCGCAATCGGCCGGGCTCGATC.GTCGCTCCCCCCGCGGGGGCGTGGATCGaa      <  2:3759387/98‑1 (MQ=2)
                                                                                                 cATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAaac    >  1:2421543/1‑101 (MQ=255)
                                                                                                 cATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAaac    <  1:2366391/101‑1 (MQ=255)
                                                                                                 cATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAaac    >  1:1524392/1‑101 (MQ=255)
                                                                                                 cATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGGGGGGCGAaac    >  2:1325645/1‑101 (MQ=255)
                                                                                                  gcgTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCGATGATCAAATCCGCAATCGGCCGGGCTCGATC.GTCGCTCCCCCCGCGGGGGCGTGGATCGaaa     <  2:1780885/99‑1 (MQ=2)
                                                                                                   tGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAaacaa  >  2:632884/1‑101 (MQ=255)
                                                                                                    |                                                                                                      
GCTTTACAGCCTTCGCGCCCCACGCCAGACGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTTCAATGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAA  >  NC_014034/1397334‑1397533

Base quality scores:  ATCG  < 3 ≤  ATCG  < 18 ≤  ATCG  < 27 ≤  ATCG  < 33 ≤  ATCG  < 40 ≤  ATCG