BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	1608051 =	0 (0.000)	73 (0.330)	28/184	18.7	0.50	intergenic (+321/‑26)	RCAP_rcc01484/murD	hypothetical protein/UDP‑N‑acetylmuramoylalanine‑‑D‑glutamate ligase
*	?	NC_014034	= 1820392	146 (0.610)	73 (0.330)	28/184	18.7	0.50	intergenic (+83/‑103)	RCAP_rcc01683/RCAP_rcc01684	terminase‑like family protein/HK97 family phage portal protein
Rejected: Position hash score below cutoff.

Only 100 of 163 total aligned reads displayed.


CAGGTGCGCGGGCTTTGAGCGCGCAAGGGCGTATTTGGACCAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATA..CGCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCGGGGCCTTGGGCCGGGCCGCGACGAGGAGAACG  >  NC_014034/1820292‑1820492


 aGGTGCGCGGGCTTTGAGCGCGCAAGGGCGTATTTGGACCAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATA..CGCCACGGGGGTGCGGGGGGGTGaaa                                                                                                       >  1:4077496/1‑101 (MQ=255)


  ggTGCGCGGGCTTTGAGCGCGCAAGGGCGTACTTGGACCAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATA..CGCCACGGGGGTGCGGGGGTGTGAAA..c                                                                                                    >  1:4130809/1‑101 (MQ=255)


   gTGCGCGGGCTTTGAGCGCGCAAGGGCGTATTTGGACCAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATA..CGCCACGGGGGTGCGGGGGTGTGAAA..cc                                                                                                   >  2:638404/1‑101 (MQ=255)


   gTGCGCGGGCTTTGAGCGCGCAAGGGCGTATTTGGACCAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATA..CGCCACGGGGGTGCGGGGGTGTGAAA..cc                                                                                                   >  1:4157130/1‑101 (MQ=255)


   gTGCGCGGGCTTTGAGCGCGCAAGGGCGTATTTGGACCAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATA..CGCCACGGGGGTGCGGGGGTGTGAAA..cc                                                                                                   >  1:809859/1‑101 (MQ=255)


    tGCGCGGGCTTTGAGCGCGCAAGGGCGTATTTGGACCAGGAAAAAGCTTCGTGTTTTTTCTTGGTGAAAATA..CGCCACGGGGGTGCGGGGGTGTGAAA..ccc                                                                                                  <  2:3108460/101‑1 (MQ=255)


       gcgGGCTTTGAGCGCGCAAGGGCGTATTTGGACCAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATA..CGCCACGGGGGTGCGGGGGTGTGAAA..CCCCCg                                                                                               >  2:2613064/1‑101 (MQ=255)


        cgGGCTTTGAGCGCGCAAGGGCGTATTTGGACCAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATA..CGCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGc                                                                                              >  1:2251519/1‑101 (MQ=255)


        cgGGCTTTGAGCGCGCAAGGGCGTATTTGGACCAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATA..AGCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGc                                                                                              >  2:3260670/1‑101 (MQ=255)


         gggCTTTGAGCGCGCAAGGGCGTATTTGGACCAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATA..CGCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCt                                                                                             >  2:3182940/1‑101 (MQ=255)


         gggCTTTGAGCGCGCAAGGGCGTATTTGGACCAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATA..CGCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCt                                                                                             >  1:1385695/1‑101 (MQ=255)


          ggCTTTGAGCGCGCAAGGGCGTATTTGGACCAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATA..CGCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCtt                                                                                            <  2:3800063/101‑1 (MQ=255)


           gCTTTGAGCGCGCAAGGGCGTATTTGGACCAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATA..CGCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCTTc                                                                                           <  1:2097880/101‑1 (MQ=255)


            cTTTGAGCGCGCAAGGGCTTATTTGGACCAGGAAAAAGCTGCGTGTTTTTTCTTGGTAAAAATA..CGCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCTTCt                                                                                          <  2:2239545/101‑1 (MQ=255)


              ttGAGCGCGCAAGGGCGTATTTGGACCAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATA..CGCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCTTCTGc                                                                                        >  1:2811991/1‑101 (MQ=255)


              ttGAGCGCGCAAGGGCGTATTTGGACCAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATA..CGCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCTTCTGc                                                                                        >  2:1830340/1‑101 (MQ=255)


               tGAGCGCGCAAGGGCGTATTTGGACCAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATA..CGCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCTTCTGcc                                                                                       >  2:1705264/1‑101 (MQ=255)


               tGAGCGCGCAAGGCCGTATTTGGACCAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATA..CGCCACGGGGGTGCGTGGGGGTTAAA..CCCCCGCTTCtctc                                                                                       >  1:2271538/1‑98 (MQ=25)


               ggggcgcgaAGGGGCTTTTTGGGACAAGAAAAAAGCTGCTTTTTTTTTTTTGGTAAAAATC..CGCCCCGGGGGTGCGGGGGTGTGAAC..CCCCCGCTTCTGcc                                                                                       <  1:465094/98‑1 (MQ=16)


                   cgcgcAAGGGCGTATTTGGACCAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATA..CGCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCTTCTGCCGCgg                                                                                   >  2:1363600/1‑101 (MQ=255)


                    gcgcAAGGGCGTATTTGGACCAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATA..CGCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCTTCTGCCGCGGa                                                                                  >  1:2344980/1‑101 (MQ=255)


                     cgcAAGGGCGTATTTGGACCAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATA..CGCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCTTCTGCCGCGGaa                                                                                 >  2:2248411/1‑101 (MQ=255)


                     cgcAAGGGCGTATTTGGACCAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATA..CGCCACGGGGGTGCGGGGGTGTGAAA..CCACCGCTTCTGCCGCGGaa                                                                                 >  2:4244487/1‑101 (MQ=255)


                       cAAGGGCGTATTTGGACCAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATA..CGCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCTTCTGCCGCGGAAAt                                                                               >  1:3545823/1‑101 (MQ=255)


                        aaGGGCGTATTTGGACCAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATA..CGCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCTTCTGCCGCGGAAATc                                                                              >  2:2044823/1‑101 (MQ=255)


                           ggCGTATTTGGACCAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATA..CGCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTgg                                                                           >  2:2364894/1‑101 (MQ=255)


                            gCGTATTTGGACCAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATA..CGCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGt                                                                          >  2:2051022/1‑101 (MQ=255)


                               tATTTGGACCAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATA..CGCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGa                                                                       >  1:2293479/1‑101 (MQ=255)


                               tATTTGGACCAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATA..CGCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGa                                                                       >  2:4441939/1‑101 (MQ=255)


                                aTTTGGACCAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATA..CGCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGaa                                                                      >  2:2820404/1‑101 (MQ=255)


                                 tttGGACCAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATA..CGCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGaaa                                                                     >  1:2995348/1‑101 (MQ=255)


                                  ttGGACCAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATA..CGCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAg                                                                    >  2:534461/1‑101 (MQ=255)


                                   tGGACCAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATA..CGCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAgg                                                                   >  1:1718424/1‑101 (MQ=255)


                                   tGGACCAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATA..CGCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAgg                                                                   >  1:1320600/1‑101 (MQ=255)


                                   tGGACCAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATA..CGCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAgg                                                                   >  2:749556/1‑101 (MQ=255)


                                    ggACCAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATA..CGCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAggg                                                                  >  1:1556623/1‑101 (MQ=255)


                                    ggACCAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATA..CGCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAggg                                                                  >  1:3124103/1‑101 (MQ=255)


                                     gACCAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATA..CGCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGt                                                                 >  1:2979629/1‑101 (MQ=255)


                                      aCCTGGAAAAACCTGTGTGTTTTTGTTTGGTGAAAATT..CGCGAGGGGGGGTGGGGGGGGTGAAT..CCCCAGCTTTTGCCGCGGAAATCTGGTCGAAAGGGTc                                                                <  2:2165437/101‑1 (MQ=255)


                                      aCCAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATA..CGCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTc                                                                >  2:3393794/1‑101 (MQ=255)


                                      aCCAGGAAAAAGCTGCGTGTTTTTTCTGGGTGAAAATA..CGCCAGGGGGGTGCGGGGGTGTGAAC..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTc                                                                <  1:1376436/101‑1 (MQ=255)


                                        cAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATA..CGCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCgg                                                              >  1:4099535/1‑101 (MQ=255)


                                        aaGGAAAAAGTGGGTTTTTTTTTATGGGAAAAAAGA..CGCCGGGGGGGGGCGGGGGGGTGAAC..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCgg                                                              <  1:1868429/100‑1 (MQ=255)


                                         aGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATA..CGCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCggg                                                             >  2:2510090/1‑101 (MQ=255)


                                          ggAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATA..CGCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCgggg                                                            >  2:2095104/1‑101 (MQ=255)


                                          ggAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATA..CGCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCgggg                                                            >  2:3226615/1‑101 (MQ=255)


                                            aaaaaGGTGCGTGTTTTTTCTTGGTGAAAATA..CGCCGGGGGGTTGGGGGGGTGTGAAC..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGtt                                                          <  1:1455453/101‑1 (MQ=37)


                                             aaaaGCTGCGTGTTTTTTCTTGGTGAAAATA..CGCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGttt                                                         >  1:1771610/1‑101 (MQ=255)


                                              aaaGCTGCGTGTTTTTTCTTGGTGAAAATA..CGCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGtttt                                                        >  1:382563/1‑101 (MQ=255)


                                               aaacgttgttttttttTTTTGGGAAAAAA..CGCGCCGGGGGGGGGGGGGGGGGAAACCCCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGttt                                                         <  1:149212/91‑1 (MQ=255)


                                                atgttggttttttttTTTTGGGAAAAAA..CGGGCGGGGGGGGGGGGGGGGTGAAACCCCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGtttt                                                        <  2:4067135/92‑1 (MQ=255)


                                                aGCTGCGTGTTTTTTCTTGGTGAAAATA..CGCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTcc                                                      >  1:3496111/1‑101 (MQ=255)


                                                 gttGCGTTTTTTTTCTTGTGGAAAATA..CGCCAGGGGGGTGGGGGGGTGTGAAC..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTccc                                                     <  1:1927889/99‑1 (MQ=255)


                                                 gctggttgtTTTTTCTTGGTGAAAACC..CGCCGGGGGGGGGGGGGGGTGTGAAC..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTccc                                                     <  1:2911593/95‑1 (MQ=255)


                                                  cTGCGTGTTTTTTCTTGGTGAAAATA..CGCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCg                                                    >  2:3906365/1‑101 (MQ=255)


                                                  agttgtgtTTTTTTTTTGGGAAAAAAGCCCCCAGGGGGGGGGGGGGGTGTGAAC..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTcc                                                      <  1:444423/97‑1 (MQ=255)


                                                     cGTGTTTTTTCTTGGTGAAAATA..CGCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGcc                                                 >  1:434345/1‑101 (MQ=255)


                                                       tgtTTTTTCTTGTTGAAAACC..CGCGACGGGGGTGCGGGGGTGTGAAC..CCCCCGCTTCTGCCGCGTAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCt                                               <  2:4577863/101‑1 (MQ=38)


                                                       tgtTTTTTCTTGGTGAAAATC..CGCCAGGGGGGTGCGGGGGTGTGAAC..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCt                                               <  2:2976543/101‑1 (MQ=255)


                                                        gtTTTTTCTTGGTGAAAATA..CGCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCtt                                              >  2:3530491/1‑101 (MQ=255)


                                                        gtTTTTTCTTGGTGAAAATA..CGCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCtt                                              >  2:848678/1‑101 (MQ=255)


                                                         ttttttTTTGGTAAAAATG..CGCCACGGGGGTGCGGGGGTTTGAAC..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCttt                                             <  2:4524087/101‑1 (MQ=38)


                                                         ttttttCTTGGTGAAAATA..CGCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCttt                                             >  1:2678759/1‑101 (MQ=255)


                                                          tttttCTTGGTGAAAATA..CGCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCtttt                                            >  1:1078508/1‑101 (MQ=255)


                                                          tttttCTTGGTGAAAATA..CGCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCtttt                                            >  2:790496/1‑101 (MQ=255)


                                                          tttttCTTGGTGAAAATA..CGCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCtttt                                            >  1:1202023/1‑101 (MQ=255)


                                                              ttttttggAAAAAA..CGCCCCGGGGGGGGGGGGGGTTGCAACCCCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTc                                          <  1:1078602/94‑1 (MQ=255)


                                                                ttcgtaaaaaTA..CGCCACGGGGGTGGGGGCGTGTAAAC..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTg                                      <  2:773520/95‑1 (MQ=38)


                                                                 tGGTGAAAATA..CGCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGCCGGGGTTTTCCCGGCCCTTTTTCTTTgg                                     >  2:487504/1‑101 (MQ=255)


                                                                    taaaaaTC..CGCCGGGGGGGTGGGGGGGTGTGAAC..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCg                                  <  2:2293317/99‑1 (MQ=255)


                                                                     gAAAATA..CGCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCgg                                 >  1:91121/1‑101 (MQ=255)


                                                                       aaaTA..CGCCACGGGGGTTCGGGGGTGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGACgggg                               >  1:721412/1‑101 (MQ=255)


                                                                        aaTA..CGCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGTCCCAAAGGGCCGGGCTTTTCCGGGCCTTTTTTCTTTGG.CGGGGcc                             >  2:4575271/1‑101 (MQ=25)


                                                                        aaTA..CGCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCGGGGc                              <  1:2135860/101‑1 (MQ=255)


                                                                        aaTA..CGCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCGGGGc                              >  2:4633758/1‑101 (MQ=255)


                                                                          tA..CGCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCGGGGCCt                            >  1:2458485/1‑101 (MQ=255)


                                                                          tA..CGCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCGGGGCCt                            >  2:1423183/1‑101 (MQ=255)


                                                                          aaaacccccggggggggggggggggTGAAACCCCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCggg                                <  1:230370/91‑1 (MQ=255)


                                                                           a..CGCCACGGGGGTGGGGGGGTGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCGGGGCCtt                           <  2:1433183/101‑1 (MQ=255)


                                                                            tgcgcccggggggggggggggttTGAAC..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCGGGGCCt                            <  1:638465/93‑1 (MQ=255)


                                                                            ggcggggggggggggggggggtgCCACC..CCCGCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCGGGGCCt                            <  1:3183183/93‑1 (MQ=255)


                                                                             gcGCCAGGGGGGTGCGGGGGTGTGAAC..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCGGGGCCtt                           <  2:809785/100‑1 (MQ=255)


                                                                               gcggggggggtggggggttgTGACC..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCGGGGCCTTgg                         <  2:2344818/96‑1 (MQ=255)


                                                                                 caggggggtgcgggggtgTGAAC..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCGGGGCCTTgggc                       <  2:2811775/98‑1 (MQ=255)


                                                                                 cagcggggtgcgggggtgTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCGGGGCCTTgggc                       <  2:3111590/97‑1 (MQ=255)


                                                                                  aCGGGGGTGCGGGGGTGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGGTTTCCCGGCCCTTTTTCTTTGGCCGGGGCCTTgggcc                      >  2:104571/1‑101 (MQ=255)


                                                                                   ggggggtgcgggggtgGGAAC..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCGGGGCCTTgggccg                     <  2:3636831/100‑1 (MQ=255)


                                                                                    gggggtgcgggggtgTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCGGGGCCTTgggccgg                    >  1:1914719/1‑101 (MQ=255)


                                                                                          gcgggggtgTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCGGGGCCTTGGGCCGGGCcgcg              >  1:4195125/1‑101 (MQ=255)


                                                                                              gggtgTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCTTTTTTCTTTGGCCGGGGCCTTGGGCCGGGCCGcgacga          >  1:1982176/1‑101 (MQ=255)


                                                                                               ggtgTGAAC..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCGGGGCCTTGGGCCGGGCCGCGACgag         <  2:3076218/101‑1 (MQ=255)


                                                                                                 tgtgAAC..CCCCCTGTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCGGGGCCTTGGGCCGGGCCGCGACgagga       <  2:1446269/101‑1 (MQ=255)


                                                                                                 tgtgAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCGGGGCCTTGGGCCGGGCCGCGACgagga       >  1:3689129/1‑101 (MQ=255)


                                                                                                  gtgAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCGGGGCCTTGGGCCGGGCCGCGACgaggag      >  2:4262917/1‑101 (MQ=255)


                                                                                                   tgAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCGGGGCCTTGGGCCGGGCCGCGACGAGgaga     >  1:1264856/1‑101 (MQ=255)


                                                                                                    gAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAGAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCGGGGCCTTGGGCCGGGCCGCGACGAGGAGaa    >  1:4641763/1‑101 (MQ=255)


                                                                                                    gAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCGGGGCCTTGGGCCGGGCCGCGACGAGGAGaa    >  2:4478137/1‑101 (MQ=255)


                                                                                                    gAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCGGGGCCTTGGGCCGGGCCGCGACGAGGAGaa    >  2:2941244/1‑101 (MQ=255)


                                                                                                      aa..CCCCCGCTTCTGCCGCGGAAATCTGGTCGCAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCGGGGCCTTGGGCCGGGCCGCGACGAGGAGAACg  >  1:4176008/1‑101 (MQ=255)


                                                                                                      aa..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCGGGGCCTTGGGCCGGGCCGCGACGAGGAGAACg  >  2:4395052/1‑101 (MQ=255)


CAGGTGCGCGGGCTTTGAGCGCGCAAGGGCGTATTTGGACCAGGAAAAAGCTGCGTGTTTTTTCTTGGTGAAAATA..CGCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCTTCTGCCGCGGAAATCTGGTCGAAAGGGTCGGGGTTTTCCCGGCCCTTTTTCTTTGGCCGGGGCCTTGGGCCGGGCCGCGACGAGGAGAACG  >  NC_014034/1820292‑1820492

Base quality scores:


ATCG

< 3 ≤


ATCG

< 17 ≤


ATCG

< 27 ≤


ATCG

< 34 ≤


ATCG

< 41 ≤


ATCG