New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	1640006 =	69 (0.320)	47 (0.220)	10/184	29.3	0.42	intergenic (+86/‑59)	mccB/mccA	methylcrotonoyl‑CoA carboxylase subunit beta/methylcrotonoyl‑CoA carboxylase subunit alpha
	?	NC_014034	= 2590196	62 (0.260)					intergenic (‑95/‑161)	glnE/RCAP_rcc02415	glutamate‑ammonia‑ligase adenylyltransferase/hypothetical protein
Rejected: Position hash score below cutoff.

GCTCATGGCGCCAGACTAGCCGCCGCAAGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCCGGGGGGTGCGGGGG..GCA.G.CG.CCCC..CG.CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATGTAAAAATCTTTCACATCCCCTCTTGACCC  >  NC_014034/2590096‑2590293                                                                                                       |                                                                                                        gCTCAGGGCCCCAGACAACCCGCCGCAAGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCCGGGGGGTGCGGGGG..GCa                                                                                                         <  2:1698100/101‑1 (MQ=255)  cTCATGGGCCCAGACTGGCCGCCGCAAGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCCGGGGGGTGCGGGGG..GCA.g                                                                                                       <  1:385720/101‑1 (MQ=255)  cTCATGGCGCCAGACTAGCCGCCGCAAGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCCGGGGGGTGCGGGGG..GCA.g                                                                                                       >  1:4186672/1‑101 (MQ=255)  cTCATGGCGCCAGACTAGCCGCCGCAAGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCCGGGGGGTGCGGGGG..GCA.g                                                                                                       >  2:458889/1‑101 (MQ=255)   ccATGGCGCCAGACTAGCCGCCGCAAGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCCGGGGGGTGCGGGGG..GCA.g.c                                                                                                     <  2:3896575/100‑1 (MQ=255)   cattGGCCCCAGACTACCCGCCGCAAGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCCGGGGGGTGCGGGGG..GCA.g.c                                                                                                     <  2:4611607/98‑1 (MQ=255)    cATGGCCCCAGCCTAGCCGCCGCAAGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCCGGGGGGTGCGGGGG..GCA.g.cg                                                                                                    <  1:2941169/101‑1 (MQ=255)       ggCGCCAGACTAGCCGCCGCAAGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCCGGGGGGTGCGGGGG..GCA.G.CG.ccc                                                                                                >  2:2258353/1‑101 (MQ=255)       ggCGCCAGACTAGCCGCCGCAAGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCCGGGGGGTGCGGGGG..GCA.G.CG.ccc                                                                                                <  1:1130565/101‑1 (MQ=255)         cgcAAGATTAGCCGCCTCAAGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCAAATATCCCGGGGGGTGCGGGGG..GCA.G.CG.cccc..c                                                                                            <  2:1907213/101‑1 (MQ=37)         aaccAGACTACCCGCCGAAAGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCCGGGGGGTGCGGGGG..GCA.G.CG.cccc..c                                                                                            <  2:2670321/99‑1 (MQ=255)          gcaaGACTACCCCCCGCAAGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCCGGGGGGTGCGGGGG..GCA.G.CG.cccc..cc                                                                                           <  2:1380444/98‑2 (MQ=255)          cccAGACTAGCCGCCGCAAGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCCGGGGGGTGCGGGGG..GCA.G.CG.cccc..cc                                                                                           <  1:2198707/100‑2 (MQ=255)                cTAGCCGCCGCAAGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCCGGGGGGTGCGGGGG..GCA.G.CGCCCCC..CG.CCggg                                                                                     >  1:4527328/1‑101 (MQ=255)                 tAGCCGCCGCAAGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCCGGGGGGTGCGGGGG..GCA.G.CGCCCCC..CG.CCGGGt                                                                                    >  2:219530/1‑101 (MQ=255)                     cgccgcAAGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCCGGGGGGTGCGGGGG..GCA.G.CGCCCCC..CG.CCGGGTCGcc                                                                                >  2:4629873/1‑101 (MQ=255)                        cgcagccccgGGGTAAGGGCGCGAAACTCCCCCGCCCCTGTCATCTTGGCGCAAATACCCGGGGGGGGGGGGGGG..GCG.GCCC.CCCC..CG.CCGGGTCGCCTCg                                                                             <  2:640366/95‑1 (MQ=255)                        cgcAAGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCCGGGGGGTGCGGGGG..GCA.G.CGCCCCC..CG.CCGGGTCGCCTCg                                                                             >  2:2969302/1‑101 (MQ=255)                          cAAGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCCGGGGGGTGCGGGGG..GCA.G.CGCCCCC..CG.CCGGGTCGCCTCGgc                                                                           >  1:4419767/1‑101 (MQ=255)                            aGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCCGGGGGGTGCGGGGG..GCA.G.CGCCCCC..CG.CCGGGTCGCCTCGgcgc                                                                         >  1:2337075/1‑101 (MQ=255)                            aGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCCGGGGGGGGCGGGGG..GCA.G.CGCCCCC..CG.CCGGGCCCCCTCGgggc                                                                         >  1:58335/1‑101 (MQ=37)                             gCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCCGGGGGGTGCGGGGG..GCA.G.CGCCCCC..CG.CCGGGTCGCCACGGCGCa                                                                        >  1:1816951/1‑101 (MQ=255)                              ccccGGGTCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCCGGGGGGTGCGGGGG..GCA.G.CGCCCCC..CG.CCGGGTCGCCTCGGCGCaa                                                                       >  2:532790/1‑101 (MQ=255)                              ccccGGGTCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCCGGGGGGTGCGGGGG..GCA.G.CGCCCCC..CG.CCGGGTCGCCTCGGCGCaa                                                                       >  1:4210064/1‑101 (MQ=255)                                ccGGGTCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCCGGGGGGTGCGGGGG..GCA.G.CGCCCCC..CG.CCGGGTCGCCTCGGCGCAAGc                                                                     >  1:1321063/1‑101 (MQ=255)                                ccGGGTCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCCGGGGGGTGCGGGGG..GCA.G.CGCCCCC..CG.CCGGGTCGCCTCGGCGCAAGc                                                                     >  1:2804157/1‑101 (MQ=255)                                 cGGGTCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCCGGGGGGTGCGGGGG..GCA.G.CGCCCCC..CG.CCGGGTCGCCTCGGCGCAAGcc                                                                    >  1:1863345/1‑101 (MQ=255)                                   ggTCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCCGGGGGGTGCGGGGG..GCA.G.CGCCCCC..CG.CCGGGTCGCCTCGGCGCAAGCCGa                                                                  >  2:406463/1‑101 (MQ=255)                                     tCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCCGGGGGGTGCGGGGG..GCA.G.CGCCCCC..CG.CCGGGTCGCCTCGGCGCAAGCCGAgg                                                                >  1:2692696/1‑101 (MQ=255)                                      cAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCCGGGGGGTGCGGGGG..GCA.G.CGCCCCC..CG.CCGGGTCGCCTCGGCGCAAGCCGAGGc                                                               >  1:2784106/1‑101 (MQ=255)                                        aGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCCGGGGGGTGCGGGGG..GCA.G.CGCCCCC..CG.CCGGGTCGCCTCGGCGCAAGCCGAGGCGa                                                             >  2:2235189/1‑101 (MQ=255)                                            gcgcAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCCGGGGGGTGCGGGGG..GCA.G.CGCCCCC..CG.CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAAtc                                                         >  1:111970/1‑101 (MQ=255)                                             cgcAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCCGGGGGGTGCGGGGG..GCA.G.CGCCCCC..CG.CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAAtct                                                        >  2:4023847/1‑101 (MQ=255)                                                 aaTGCCCCGCCCCTGTCATCTTGGCGCGAATATCCCGGGGGGTGCGGGGG..GCA.G.CGCCCCC..CG.CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAAtctcttc                                                    >  1:1105549/1‑99 (MQ=255)                                                 aaTGCCCCGCCCCTGTCATCTTGGCGCGAATATCCCGGGGGGTGCGGGGG..GCA.G.CGCCCCC..CG.CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTcc                                                    >  1:4066487/1‑101 (MQ=255)                                                   tGCCCCGCCCCTGTCATCTTGGCGCGAATATCCCGGGGGGCGCGGGGG..GCA.G.CGCCCCC..CG.CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATTTATcccc                                                  >  1:1187875/1‑101 (MQ=37)                                                   ccgcccgttccTGTCATCTTGGCGCGAATATCCCGGGGGGTGCGGGGG..GCA.G.CGCCCCC..CG.CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTcccc                                                  >  2:3609640/10‑101 (MQ=37)                                                    gccccgccccTGTCATCTTGGCGCGAATATCCCGGGGGGTGCGGGGG..GCA.G.CGCCCCC..CG.CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCg                                                 >  2:2627227/1‑101 (MQ=255)                                                    gccccgccccTGTCATCTTGGCGCGAATATCCCGGGGGGTGCGGGGG..GCA.G.CGCCCCC..CG.CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCg                                                 >  2:4252544/1‑101 (MQ=255)                                                    gccccgccccTGTCATCTTGGCGCGAATATCCCGGGGGGTGCGGGGG..GCA.G.CGCCCCC..CG.CCGGGTCGCCCCGGCGCCAGCCGGGGCGAAAACTCTccccc                                                 >  2:3187565/1‑100 (MQ=37)                                                      ccccccccTGGCCTCTTGGCCGCAATCCCCCGGGGGGGGGGGGGGCCCCC.C.CC.CCCC..CG.CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGa                                                <  2:3790672/101‑1 (MQ=12)                                                         gccccTGTCATCTTGGCGCGAATATCCCGGGGGGTGCGGGGG..GCA.G.CGCCCCC..CG.CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGAcccc                                            >  1:3263039/1‑101 (MQ=255)                                                          ccccTGTCATCTTGGCGCGAATATCCCGGGGGGTGCGGGGG..GCA.G.CGCCCCC..CG.CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATATCTCCCCGACCCCt                                           >  2:2298772/1‑101 (MQ=255)                                                            ccTGTCATCTTGGCGCGAATATCCCGGGGGGTGCGGGGG..GCA.G.CGCCCCC..CG.CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTg                                         >  1:1092345/1‑101 (MQ=255)                                                              tGTCATCTTGGCGCGAATATCCCGGGGGGTGCGGGGG..GCA.G.CGCCCCC..CG.CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTgcg                                       >  2:3258323/1‑101 (MQ=255)                                                               gTCATCTTGGCGCGAATATCCCGGGGGGTGCGGGGG..GCA.G.CGCCCCC..CG.CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTgcgg                                      >  1:1914110/1‑101 (MQ=255)                                                                 cATCTTGGCGCGAATATCCCGGGGGGTGCGGGGG..GCA.G.CGCCCCC..CG.CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTgcggcg                                    >  2:4665724/1‑101 (MQ=255)                                                                 cATCTTGGCGCGAATATCCCGGGGGGTGCGGGGG..GCA.G.CGCCCCC..CG.CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCCACCCCCTgcggcg                                    >  1:4060095/1‑101 (MQ=37)                                                                   tCTTGGCGCGAATATCCCGGGGGGTGCGGGGG..GCA.G.CGCCCCC..CG.CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCa                                  >  2:3359767/1‑101 (MQ=255)                                                                    cTTGGCGCGAATATCCCGGGGGGTGCGGGGG..GCA.G.CGCCCCC..CG.CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCaa                                 >  2:1127179/1‑101 (MQ=255)                                                                      tGGCGCGAATATCCCGGGGGGTGCGGGGG..GCA.G.CGCCCCC..CG.CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTACCCGACCCCCTGCGGCGCAGTg                               >  1:4371667/1‑101 (MQ=37)                                                                       ggCGCGAATATCCCGGGGGGTGCGGGGG..GCA.G.CGCCCCC..CG.CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATGt                              >  1:2955703/1‑101 (MQ=255)                                                                        gcgcGAATATCCCGGGGGGTGCGGGGG..GCA.G.CGCCCCC..CG.CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATGTa                             >  2:2740222/1‑101 (MQ=255)                                                                              atatCCCGGGGGGTGCGGGGG..GCA.G.CGCCCCC..CG.CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGGCATGTAAAAATc                       >  2:3994236/1‑101 (MQ=37)                                                                               tatCCCGGGGGGTGCGGGGG..GCA.G.CGCCCCC..CG.CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATGTACAAATCt                      >  2:3869303/1‑101 (MQ=255)                                                                               tatCCCGGGGGGTGCGGGGG..GCA.G.CGCCCCC..CG.CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATGTAAAAATCt                      >  1:1810301/1‑101 (MQ=255)                                                                                atCCCGGGGGGTGCGGGGG..GCA.G.CGCCCCC..CG.CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATGTAAAAATCtt                     >  1:4171893/1‑101 (MQ=255)                                                                                atCCCGGGGGGTGCGGGGG..GCA.G.CGCCCCC..CG.CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATGTAAAAATCtt                     >  2:1254114/1‑101 (MQ=255)                                                                                 tCCCGGGGGGTGCGGGGG..GCA.G.CGCCCCC..CG.CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATGTAAAAATCttt                    >  1:1333970/1‑101 (MQ=255)                                                                                 gccgggggggGGGGGGGG..GCG.GCCC.CCCC..CC.CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATGTAAAAATCttt                    <  2:804335/97‑1 (MQ=37)                                                                                  ccgggggggGGGGGGGG..GCC.C.CC.CCCC..CGCCCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATGTAAAAATCTTTc                   <  1:2264475/98‑1 (MQ=37)                                                                                  cccGGGGGGTGCGGGGG..GCA.G.CGCCCCC..CG.CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATGTAAAAATCTTTc                   >  2:3566535/1‑101 (MQ=255)                                                                                   ccGGGGGGTGCGGGGG..GCA.G.CGCCCCC..CG.CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATGTAAAAATCTTTca                  >  1:4262917/1‑101 (MQ=255)                                                                                   ccGGGGGGTGCGGGGG..GCA.G.CGCCCCC..CG.CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTATCCCCGACCCCTTGCGGCGCAATGTAAAAATCTTTca                  >  2:2289042/1‑101 (MQ=255)                                                                                    gggggggTGGGGGGG..GGC.G.CC.CCCCCGCG.CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATGTAAAAATCTTTca                  <  2:720183/100‑1 (MQ=25)                                                                                    ggggcggTGGGGGGG..GCACC.CC.CCCC..CG.CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATGTAAAAATCTTTcac                 <  2:2757835/100‑1 (MQ=37)                                                                                     ggggggTGCGGGGG..GCA.G.CGCCCCC..CG.CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCCACCCCTTGCGGCGCAATGGAAAAAGCTTTcaca                >  1:4025771/1‑101 (MQ=37)                                                                                      gggggTGCGGGGG..GCA.G.CGCCCCC..CG.CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATGGAAAAATCTTTCACAt               >  1:3711437/1‑101 (MQ=255)                                                                                          gTGCGGGGG..GCA.G.CGCCCCC..CG.CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATGTAAAAATCTTTCACATcccc           >  1:4276074/1‑101 (MQ=255)                                                                                           tGCGGGGG..GCT.G.CGCCCCC..CG.CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATGTAAAAATCTTTCACATCCCct          >  2:988423/1‑101 (MQ=255)                                                                                             cGGGGG..GCA.G.CGCCCCC..CG.CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATGTAAAAATCTTTCACATCCCctct        >  1:3878553/1‑101 (MQ=255)                                                                                              ggggg..gCC.G.CCCCCCC..CGCCCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATGTAAAAATCTTTCACATCCCctct        <  2:2264495/101‑1 (MQ=38)                                                                                              ggggg..gCA.G.CGCCCCC..CG.CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATGTAAAAATCTTTCACATCCCCTCtt       >  2:1385167/1‑101 (MQ=255)                                                                                              ggggg..gCA.G.CGCCCCC..CG.CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGAACCCTTGCGGCGCAATGTAAAAATCTTTCACATCCCCTCtt       >  2:2960488/1‑101 (MQ=255)                                                                                               gggg..gCA.G.CGCCCCC..CG.CCGGGTCGCCTCGGCGCAAGCCGCGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATGTAAAAATCTTTCACATCCCCTCTTg      >  2:1816848/1‑101 (MQ=255)                                                                                                     gCA.G.CGCCCCC..CG.CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATGTAAAAATCTTTCACATCCCCTCTTgaccc  >  2:2934074/1‑101 (MQ=255)                                                                                                     gCA.G.CGCCCCC..CG.CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATGTAAAAATCTTTCACATCCCCTCTTgaccc  >  2:220287/1‑101 (MQ=255)                                                                                                       |                                                                                                        GCTCATGGCGCCAGACTAGCCGCCGCAAGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCCGGGGGGTGCGGGGG..GCA.G.CG.CCCC..CG.CCGGGTCGCCTCGGCGCAAGCCGAGGCGAAATCTCTCCCCGACCCCTTGCGGCGCAATGTAAAAATCTTTCACATCCCCTCTTGACCC  >  NC_014034/2590096‑2590293 Base quality scores:  ATCG  < 3 ≤  ATCG  < 15 ≤  ATCG  < 23 ≤  ATCG  < 33 ≤  ATCG  < 40 ≤  ATCG