New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 203773207 (0.930)2 (0.010) 2/188 37.5 0.01 coding (741/1116 nt) RCAP_rcc00171 hypothetical protein
?NC_014034 3737977 = 248 (1.040)coding (313/777 nt) paaF enoyl‑CoA hydratase
Rejected: Position hash score below cutoff.

Only 100 of 265 total aligned reads displayed.

CGACAAGAGCTTTGTCGACATGCTCAAGCTGGATTTCTTCGGCACCGAGGGCGATGCGATCCTGCGCACGCGCAAACCGGTCATCGCGGCGGTGGCGGGCTATGCCTTGGGCGGCGGCTGCGAACTCGCCATGATGTGCGACTTCATTCTTTGCGCCGAGAATGCGAAATTCGGCCAGCCCGAGATCAATCTGGGCGTCGT  >  NC_014034/3737877‑3738077
                                                                                                    |                                                                                                    
cGACAAGAGCTTTGTCGACATGCTCAAGCTGGATTTCTTCGGCACCGAGGGCGATGCGATCCTGCGCACGCGCAAACCGGTCATCGCGGCGGTGGCGGGCt                                                                                                      >  2:4242245/1‑101 (MQ=255)
cGACAAGAGCTTTGTCGACATGCTCAAGCTGGATTTCTTCGGCACCGAGGGCGATGCGATCCTGCGCACGCGCAAACCGGTCATCGCGGCGGTGGCGGGCt                                                                                                      >  1:4407547/1‑101 (MQ=255)
cGACAAGAGCTTTGTCGACATGCTCAAGCTGGATTTCTTCGGCACCGAGGGCGATGCGATCCTGCGCACGCGCAAACCGGTCATCGCGGCGGTGGCGGGCt                                                                                                      >  1:1334238/1‑101 (MQ=255)
 gACAAGAGCTTTGTCGACATGCTCAAGCTGGATTTCTTCGGCACCGAGGGCGATGCGATCCTGCGCACGCGCAAACCGGTCATCGCGGCGGTGGCGGGCTa                                                                                                     >  2:1922639/1‑101 (MQ=255)
 gACAAGAGCTTTGTCGACATGCTCAAGCTGGATTTCTTCGGCACCGAGGGCGATGCGATCCTGCGCACGCGCAAACCGGTCATCGCGGCGGTGGCGGGCTa                                                                                                     >  2:3394562/1‑101 (MQ=255)
   cAAGAGCTTTGTCGACATGCTCAAGCTGGATTTCTTCGGCACCGAGGGCGATGCGATCCTGCGCACGCGCAAACCGGTCATCGCGGCGGTGGCGGGCTATg                                                                                                   <  1:3767966/101‑1 (MQ=255)
    aaGAGCTTTGTCGACATGCTCAAGCTGGATTTCTTCGGCACCGAGGGCGATGCGATCCTGCGCACGCGCAAACCGGTCATCGCGGCGGTGGCGGGCTATGc                                                                                                  >  1:2435270/1‑101 (MQ=255)
     agagCTTTGTCGACATGCTCAAGCTGGATTTCTTCGGCAGCGAGGGCGATGCGATCCTGCGCACGCGCAAACCGGTCATCGCGGCGGTGGCGGGCTATGcc                                                                                                 <  2:776202/101‑1 (MQ=255)
      gagCTTTGTCGACATGCTCAAGCTGGATTTCTTCGGCACCGAGGGCGATGCGATCCTGCGCACGCGCAAACCGGTCATCGCGGCGGTGGCGGGCTATGCCt                                                                                                >  1:2971110/1‑101 (MQ=255)
       agCTTTGTCGACATGCTCAAGCTGGATTTCTTCGGCACCGAGGGCGATGCGATCCTGCGCACGCGCAAACCGGTCATCGCGGCGGTGGCGGGCTATGCCtt                                                                                               >  2:1869089/1‑101 (MQ=255)
        gCTTTGTCGACATGCTCAAGCTGGATTTCTTCGGCACCGAGGGCGATGCGATCCTGCGCACGCGCAAACCGGTCATCGCGGCGGTGGCGGGCTATGCCTTg                                                                                              >  1:4175233/1‑101 (MQ=255)
        gCTTTGTCGACATGCTCAAGCTGGATTTCTTCGGCACCGAGGGCGATGCGATCCTGCGCACGCGCAAACCGGTCATCGCGGCGGTGGCGGGCTATGCCTTg                                                                                              <  2:3497380/101‑1 (MQ=255)
         cTTTGTCGACATGCTCAAGCTGGATTTCTTCGGCACCGAGGGCGATGCGATCCTGCGCACGCGCAAACCGGTCATCGCGGCGGTGGCGGGCTATGCCTTgg                                                                                             >  1:4215583/1‑101 (MQ=255)
         cTTTGTCGACATGCTCAAGCTGGATTTCTTCGGCACCGAGGGCGATGCGATCCTGCGCACGCGCAAACCGGTCATCGCGGCGGGGGCGGGCTATGCCTTgg                                                                                             >  2:4186094/1‑101 (MQ=255)
          tttGTCGACATGCTCAAGCTGGATTTCTTCGGCACCGAGGGCGATGCGATCCTGCGCACGCGCAAACCGGTCATCGCGGCGGTGGCGGGCTATGCCTTggg                                                                                            >  1:1877766/1‑101 (MQ=255)
          tttGTCGACATGCTCAAGCTGGATTTCTTCGGCACCGAGGGCGATGCGATCCTGCGCACGCGCAAACCGGTCATCGCGGCGGTGGCGGGCTATGCCTTggg                                                                                            >  2:2702441/1‑101 (MQ=255)
              tCGACATGCTCAAGCTGGATTTCTTCGGCACCGAGGGCGATGCGATCCTGCGCACGCGCAAACCGGTCATCGCGGCGGTGGCGGGCTATGCCTTGggcggg                                                                                        >  1:4550700/1‑100 (MQ=255)
              gcGACATGCTCAAGCTGGATTTCTTCGGCACCGAGGGCGATGCGATCCTGCGCACGCGCAAACCGGTCATCGCGGCGGTGGCGGGCTATGCCTTGggcggc                                                                                        <  2:2874284/100‑1 (MQ=255)
               cGACATGCTCAAGCTGGATTTCTTCGGCACCGAGGGCGATGCGATCCTGCGCACGCGCAAACCGGTCATCGCGGCGGTGGCGGGCTATGCCTTGggcggcg                                                                                       >  2:3785081/1‑101 (MQ=255)
               cGACATGCTCAAGCCGGATTTCTTCGGCACCGAGGGCGATGCGATCCTGCGCACGCGCAAACCGGTCATCGCGGCGGTGGCGGGCTATGCCTTGggcggcg                                                                                       >  1:2609872/1‑101 (MQ=255)
                gACATGCTCAAGCTGGATTTCTTCGGCACCGAGGGCGATGCGATCCTGCGCACGCGCAAACCGGTCATCGCGGCGGTGGCGGGCTATGCCTTGggcggcgg                                                                                      >  2:1010817/1‑101 (MQ=255)
                gACATGCTCAAGCTGGATTTCTTCGGCACCGAGGGCGATGCGATCCTGCGCACGCGCAAACCGGTCATCGCGGCGGTGGCGGGCTATGCCTTGggcggcgg                                                                                      <  1:4463984/101‑1 (MQ=255)
                 aCATGCTCAAGCTGGATTTCTTCGGCACCGAGGGCGATGCGATCCTGCGCACGCGCAAACCGGTCATCGCGGCGGTGGCGGGCTATGCCTTGggcggcggc                                                                                     <  2:1118545/101‑1 (MQ=255)
                  cATGCTCAAGCTGGATTTCTTCGGCACCGAGGGCGATGCGATCCTGCGCACGCGCAAACCGGTCATCGCGGCGGTGGCGGGCTATGCCTTGGGCGGCGGCt                                                                                    >  2:1148053/1‑101 (MQ=255)
                   aTGCTCAAGCTGGATTTCTTCGGCACCGAGGGCGATGCGATCCTGCGCACGCGCAAACCGGTCATCGCGGCGGTGGCGGGCTATGCCTTGGGCGGCGGCTg                                                                                   <  1:68284/101‑1 (MQ=255)
                   aTGCTCAAGCTGGATTTCTTCGGCACCGAGGGCGATGCGATCCTGCGCACGCGCAAACCGGTCATCGCGGCGGTGGCGGGCTATGCCTTGGGCGGCGGCTg                                                                                   >  2:2936983/1‑101 (MQ=255)
                    tGCTCAAGCTGGATTTCTTCGGCACCGAGGGCGATGCGATCCTGCGCACGCGCAAACCGGTCATCGCGGCGGTGGCGGGCTATGCCTTGGGCGGCGGCTGc                                                                                  >  2:2743315/1‑101 (MQ=255)
                      cTCAAGCTGGATTTCTTCGGCACCGAGGGCGATGCGATCCTGCGCACGCGCAAACCGGTCATCGCGGCGGTGGCGGGCTATGCCTTGGGCGGCGGCTGCGa                                                                                >  1:1281573/1‑101 (MQ=255)
                        cAAGCTGGATTTCTTCGGCACCGAGGGCGATGCGATCCTGCGCACGCGCAAACCGGTCATCGCGGCGGTGGCGGGCTATGCCTTGGGCGGCGGCTGCGAAc                                                                              >  1:3402786/1‑101 (MQ=255)
                        cAAGCTGGATTTCTTCGGCACCGAGGGCGATGCGATCCTGCGCACGCGCAAACCGGTCATCGCGGCGGTGGCGGGCTATGCCTTGGGCGGCGGCTGCGAAc                                                                              >  1:206161/1‑101 (MQ=255)
                         aaGCTGGATTTCTTCGGCACCGAGGGCGATGCGATCCTGCGCACGCGCAAACCGGTCATCGCGGCGGTGGCGGGCTATGCCTTGGGCGGCGGCTGCGAACt                                                                             >  2:4583995/1‑101 (MQ=255)
                         aaGCTGGATTTCTTCGGCACCGAGGGCGATGCGATCCTGCGCACGCGCAAACCGGTCATCGCGGCGGTGGCGGGCTATGCCTTGGGCGGCGGCTGCGAACt                                                                             >  1:1768652/1‑101 (MQ=255)
                          aGCTGGATTTCTTCGGCACCGAGGGCGATGCGATCCTGCGCACGCGCAAACCGGTCATCGCGGCGGTGGCGGGCTATGCCTTGGGCGGCGGCTGCGAACTc                                                                            <  1:2744255/101‑1 (MQ=255)
                            cTGGATTTCTTCGGCACCGAGGGCGATGCGATCCTGCGCACGCGCAAACCGGTCATCGCGGCGGTGGCGGGCTATGCCTTGGGCGGCGGCTGCGAACTCGc                                                                          >  2:1453561/1‑101 (MQ=255)
                              ggATTTCTTCGGCACCGAGGGCGATGCGATCCTGCGCACGCGCAAACCGGTCATCGCGGCGGTGGCGGGCTATGCCTTGGGCGGCGGCTGCGAACTCGCCa                                                                        <  2:3027586/101‑1 (MQ=255)
                              ggATTTCTTCGGCACCGAGGGCGATGCGATCCTGCGCACGCGCAAACCGGTCATCGCGGCGGTGGCGGGCTATGCCTTGGGCGGCGGCTGCGAACTCGCCa                                                                        <  1:1218804/101‑1 (MQ=255)
                                aTTTCTTCGGCACCGAGGGCGATGCGATCCTGCGCACGCGCAAACCGGTCATCGCGGCGGTGGCGGGCTATGCCTTGGGCGGCGGCTGCGAACTCGCCatg                                                                      <  2:2299151/101‑1 (MQ=255)
                                aTTTCTTCGGCACCGAGGGCGATGCGATCCTGCGCACGCGCAAACCGGTCATCGCGGCGGTGGCGGGCTATGCATTGGGCGGCGGCTGCGAACTCGCCatg                                                                      <  1:1177989/101‑1 (MQ=255)
                                 tttCTTCGGCACCGAGGGCGATGCGATCCTGCGCACGCGCAAACCGGTCATCGCGGCGGTGGCGGGCTATGCCTTGGGCGGCGGCTGCGAACTCGCCatga                                                                     >  2:1103055/1‑101 (MQ=255)
                                  ttcttcGGCACCGAGGGCGATGCGATCCTGCGCACGCGCAAACCGGTCATCGCGGCGGTGGCGGGCTATGCCTTGGGCGGCGGCTGCGAACTCGCCatgat                                                                    <  2:1334145/101‑1 (MQ=255)
                                  ttcttcGGCACCGAGGGCGATGCGATCCTGCGCACGCGCAAACCGGTCATCGCGGCGGTGGCGGGCTATGCCTTGGGCGGCGGCTGCGAACTCGCCatgat                                                                    >  1:3165299/1‑101 (MQ=255)
                                   tcttcGGCACCGAGGGCGATGCGATCCTGCGCACGCGCAAACCGGTCATCGCGGCGGTGGCGGGCTATGCCTTGGGCGGCGGCTGCGAACTCGCCatgatg                                                                   <  1:466393/101‑1 (MQ=255)
                                    cttcGGCACCGAGGGCGATGCGATCCTGCGCACGCGCAAACCGGTCATCGCGGCGGTGGCGGGCTATGCCTTGGGCGGCGGCTGCGAACTCGCCatgatgg                                                                  >  2:3442448/1‑100 (MQ=255)
                                    cttcGGCACCGAGGGCGATGCGATCCTGCGCACGCGCAAACCGGTCATCGCGGCGGTGGCGGGCTATGCCTTGGGCGGCGGCTGCGAACTCGCCATGAtgt                                                                  <  1:900896/101‑1 (MQ=255)
                                     ttcGGCACCGAGGGCGATGCGATCCTGCGCACGCGCAAACCGGTCATCGCGGCGGTGGCGGGCTATGCCTTGGGCGGCGGCTGCGAACTCGCCATGAtgtg                                                                 <  1:330226/101‑1 (MQ=255)
                                      tcGGCACCGAGGGCGATGCGATCCTGCGCACGCGCAAACCGGTCATCGCGGCGGTGGCGGGCTATGCCTTGGGCGGCGGCTGCGAACTCGCCATGATGTGc                                                                <  2:3371626/101‑1 (MQ=255)
                                        ggCACCGAGGGCGATGCGATCCTGCGCACGCGCAAACCGGTCATCGCGGCGGTGGCGGGCTATGCCTTGGGCGGCGGCTGCGAACTCGCCATGATGTGCGa                                                              <  1:229060/101‑1 (MQ=255)
                                          cACCGAGGGCGATGCGATCCTGCGCACGCGCAAACCGGTCATCGCGGCGGTGGCGGGCTATGCCTTGGGCGGCGGCTGCGAACTCGCCATGATGTGCGACt                                                            >  2:1710681/1‑101 (MQ=255)
                                           aCCGAGGGCGATGCGATCCTGCGCACGCGCAAACCGGTCATCGCGGCGGTGGCGGGCTATGCCTTGGGCGGCGGCTGCGAACTCGCCATGATGTGCGACtt                                                           <  2:3086392/101‑1 (MQ=255)
                                            ccGAGGGCGATGCGATCCTTCGCACGCGCAAACCGGTCATCGCGGCGGTGGCGGGCTATGCCTTGGGCGGCGGCTGCGAACTCGCCATGATGTGCGACTTc                                                          <  2:717016/101‑1 (MQ=255)
                                              gAGGGCGATGCGATCCTGCGCACGCGCAAACCGGTCATCGCGGCGGTGGCGGGCTATGCCTTGGGCGGCGGCTGCGAACTCGCCATGATGTGCGACTTCAt                                                        >  1:349234/1‑101 (MQ=255)
                                               aGGGCGATGCGATCCTGCGCACGCGCAAACCGGTCATCGCGGCGGTGGCGGGCTATGCCTTGGGCGGCGGCTGCGAACTCGCCATGATGTGCGACTTCAtt                                                       <  2:2408012/101‑1 (MQ=255)
                                               aGGGCGATGCGATCCTGCGCACGCGCAAACCGGTCATCGCGGCGGTGGCGGGCTATGCCTTGGGCGGCGGCTGCGAACTCGCCATGATGTGCGACTTCAtt                                                       >  2:3921323/1‑101 (MQ=255)
                                               aGGGCGATGCGATCCTGCGCACGCGCAAACCGGTCATCGCGGCGGTGGCGGGCTATGCCTTGGGCGGCGGCTGCGAACTCGCCATGATGTGCGACTTCAtt                                                       <  1:2541741/101‑1 (MQ=255)
                                                gggCGATGCGATCCTGCGCACGCGCAAACCGGTCATCGCGGCGGTGGCGGGCTATGCCTTGGGCGGCGGCTGCGAACTCGCCATGATGTGCGACTTCATTc                                                      <  2:4352549/101‑1 (MQ=255)
                                                  gcgatgcgatCCTGCGCACGCGCAAACCGGTCATCGCGGCGGTGGCGGGCTATGCCTTGGGCGGCGGCTGCGAACTCGCCATGATGTGCGACTTCATTCtt                                                    <  1:2122858/101‑1 (MQ=255)
                                                   cgatgcgatCCTGCGCACGCGCAAACCGGTCATCGCGGCGGTGGCGGGCTATGCCTTGGGCGGCGGCTGCGAACTCGCCATGATGTGCGACTTCATTCttt                                                   <  2:1271953/101‑1 (MQ=255)
                                                    gatgcgatCCTGCGCACGCGCAAACCGGTCATCGCGGCGGTGGCGGGCTATGCCTTGGGCGGCGGCTGCGAACTCGCCATGATGTGCGACTTCATTCTTTg                                                  <  1:1075737/101‑1 (MQ=255)
                                                      tgcgatCCTGCGCACGCGCAAACCGGTCATCGCGGCGGTGGCGGGCTATGCCTTGGGCGGCGGCTGCGAACTCGCCATGATGTGCGACTTCATTCTTTgcg                                                <  2:4106449/101‑1 (MQ=255)
                                                       gcgatCCTGCGCACGCGCAAACCGGTCATCGCGGCGGTGGCGGGCTATGCCTTGGGCGGCGGCTGCGAACTCGCCATGATGTGCGACTTCATTCTTTgcgc                                               <  1:1135130/101‑1 (MQ=255)
                                                         gatCCTGCGCACGCGCAAACCGGTCATCGCGGCGGTGGCGGGCTATGCCTTGGGCGGCGGCTGCGAACTCGCCATGATGTGCGACTTCATTCTTTGCGCCg                                             <  2:2113991/101‑1 (MQ=255)
                                                         gatCCTGCGCACGCGCAAACCGGTCATCGCGGCGGTGGCGGGCTATGCCTTGGGCGGCGGCTGCGAACTCGCCATGATGTGCGACTTCATTCTTTGCGCCg                                             >  1:625207/1‑101 (MQ=255)
                                                            ccTACGTACGCTCAAACCGGTCATCGCGGCGGTGGCGGGCTATGCCTTGGGCGGCGGCTGCGAACTCGCCATGATGTGCGACTTCATTCTTTGCGCCgaga                                          <  1:3049491/101‑1 (MQ=255)
                                                             cTGCGCACGCGCAAACCGGTCATCGCGGCGGTGGCGGGCTATGCCTTGGGCGGCGGCTGCGAACTCGCCATGATGTGCGACTTCATTCTTTGCGCCGAGaa                                         <  1:3871285/101‑1 (MQ=255)
                                                             cTGCGCACGCGCAAACCGGTCATCGCGGCGGTGGCGGGCTATGCCTTGGGCGGCGGCTGCGAACTCGCCATGATGTGCGACTTCATTCTTTGCGCCGAGaa                                         <  1:1464716/101‑1 (MQ=255)
                                                              tGCGCACGCGCAAACCGGTCATCGCGGCGGTGGCGGGCTATGCCTTGGGCGGCGGCTGCGAACTCGCCATGATGTGCGACTTCATTCTTTGCGCCGAGAAt                                        >  2:957569/1‑101 (MQ=255)
                                                              tGCGCACGCGCAAACCGGTCATCGCGGCGGTGGCGGGCTATGCCTTGGGCGGCGGCTGCGAACTCGCCATGATGTGCGACTTCATTCTTTGCGCCGAGAAt                                        <  1:1008734/101‑1 (MQ=255)
                                                               gcgcACGCGCAAACCGGTCATCGCGGCGGTGGCGGGCTATGCCTTGGGCGGCGGCTGCGAACTCGCCATGATGTGCGACTTCATTCTTTGCGCCGAGAATg                                       <  2:3193512/101‑1 (MQ=255)
                                                                cgcACGCGCAAGCCGGTCATCGCGGCGGTGGCGGGCTATCCCTTGGGCGGCGGCTGCGAACTCGCCATGATGTGCGACTTCATTCTTTGCGCCGAGAATGc                                      <  2:2606531/101‑1 (MQ=255)
                                                                cgcACGCGCAAACCGGTCATCGCGGCGGTGGCGGGCTATGCCTTGGGCGGCGGCTGCGAACTCGCCATGATGTGCGACTTCATTCTTTGCGCCGAGAATGc                                      <  1:1581365/101‑1 (MQ=255)
                                                                cgcACGCGCAAACCGGTCATCGCGGCGGTGGCGGGCTATGCCTTGGGCGGCGGCTGCGAACTCGCCATGATGTGCGACTTCATTCTTTGCGCCGAGAATGc                                      <  2:3061396/101‑1 (MQ=255)
                                                                cacACGCGCAAACCGGTCAGCGCGGCGGTGGCGGGCTATGCCTTGGGCGGCGGCTGCGAACTCGCCATGATGTGCGACTTCATTCTTTGCGCCGAGAAGGc                                      <  2:2220375/99‑1 (MQ=255)
                                                                       gcAAACCGGTCATCGCGGCGGTGGCGGGCTATGCCTTGGGCGGCGGCTGCGAACTCGCCATGATGTGCGACTTCATTCTTTGCGCCGAGAATGCGAAATTc                               <  1:4236906/101‑1 (MQ=255)
                                                                       gcAAACCGGTCATCGCGGCGGTGGCGGGCTATGCCTTGGGCGGCGGCTGCGAACTCGCCATGATGTGCGACTTCATTCTTTGCGCCGAGAATGCGAAATTc                               <  1:954648/101‑1 (MQ=255)
                                                                        cAAACCGGTCATCGCGGCGGTGGCGGGCTATGCCTTGGGCGGCGGCTGCGAACTCGCCATGATGTGCGACTTCATTCTTTGCGCCGAGAATGCGAAATTCg                              <  2:575320/101‑1 (MQ=255)
                                                                           aCCGGTCATCGCGGCGGTGGCGGGCTATGCCTTGGGCGGCGGCTGCGAACTCGCCATGATGTGCGACTTCATTCTTTGCGCCGAGAATGCGAAATTCGGcc                           <  2:4469065/101‑1 (MQ=255)
                                                                            ccGGTCATCGCGGCGGTGGCGGGCTATGCCTTGGGCGGCGGCTGCGAACTCGCCATGATGTGCGACTTCATTCTTTGCGCCGAGAATGCGAAATTCGGCCa                          <  1:519616/101‑1 (MQ=255)
                                                                            ccGGTCACTGCGGCGGTGGTGGGCTAGGCTTCGCGTCGCGCCTGCGAGCTCGCCATGATGTGCGCCTTCATTCTTTGCGCCGAGAATGCGAAATTCGGGCa                          <  2:503367/101‑1 (MQ=255)
                                                                             cGGTCATCGCGGCGGTGGCGGGCTATGCCTTGGGCGGCGGCTGCGAACTCGCCATGATGTGCGACTTCATTCTTTGCGCCGAGAATGCGAAATTCGGCCAg                         >  1:2323457/1‑101 (MQ=255)
                                                                                 cATCGCGGCGGTGGCGGGCTATGCCTTGGGCGGCGGCTGCGAACTCGCCATGATGTGCGACTTCATTCTTTGCGCCGAGAATGCGAAATTCGGCCAGCCCg                     <  1:3593987/101‑1 (MQ=255)
                                                                                  aTCGCGGCGGTGGCGGGCTATGCCTTGGGCGGCGGCTGCGAACTCGCCATGATGTGCGACTTCGTTCTTTGCGCCGAGAATGCGAAATTCGGCCAGCCCga                    >  1:3992938/1‑101 (MQ=255)
                                                                                  aTCGCGGCGGTGGCGGGCTATGCCTTGGGCGGCGGCTGCGAACTCGCCATGATGTGCGACTTCATTCTTTGCGCCGAGAATGCGAAATTCGGCCAGCCCga                    >  1:149498/1‑101 (MQ=255)
                                                                                  aTCGCGGCGGTGGCGGGCTATGCCTTGGGCGGCGGCTGCGAACTCGCCATGATGTGCGACTTCATTCTTTGCGCCGAGAATGCGAAATTCGGCCAGCCCga                    >  2:3561345/1‑101 (MQ=255)
                                                                                   tCGCGGCGGTGGCGGGCTATGCCTTGGGCGGCGGCTGCGAACTCGCCATGATGTGCGACTTCATTCTTTGCGCCGAGAATGCGAAATTCGGCCAGCCCgag                   <  1:477191/101‑1 (MQ=255)
                                                                                   tCGCGGCGGTGGCGGGCTATGCCTTGGGCGGCGGCTGCGAACTCGCCATGATGTGCGACTTCATTCTTTGCGCCGAGAATGCGAAATTCGGCCAGCCCgag                   <  1:4584294/101‑1 (MQ=255)
                                                                                    cgcgGCGGTGGCGGGCTATGCCTTGGGCGGCGGCTGCGAACTCGCCATGATGTGCGACTTCATTCTTTGCGCCGAGAATGCGAAATTCGGCCAGCCCgaga                  <  1:4074190/101‑1 (MQ=255)
                                                                                     gcggcgGTGGCGGGCTATGCCTTGGGCGGCGGCTGCGAACTCGCCATGATGTGCGACTTCATTCTTTGCGCCGAGAATGCGAAATTCGGCCAGCCCGAGAt                 >  2:1555473/1‑101 (MQ=255)
                                                                                      cggcggTGGCGGGCTATGCCTTGGGCGGCGGCTGCGAACTCGCCATGATGTGCGACTTCATTCTTTGCGCCGAGAATGCGAAATTCGGCCAGCCCGAGATc                <  2:1650576/101‑1 (MQ=255)
                                                                                       ggcggTGGCGGGCTATGCCTTGGGCGGCGGCTGCGAACTCGCCATGATGTGCGACTTCATTCTTTGCGCCGAGAATGCGAAATTCGGCCAGCCCGAGATCa               >  2:1500318/1‑101 (MQ=255)
                                                                                          ggTGGCGGGCTATGCCTTGGGCGGCGGCTGCGAACTCGCCATGATGTGCGACTTCATTCTTTGCGCCGAGAATGCGAAATTCGGCCAGCCCGAGATCAATc            <  1:827472/101‑1 (MQ=255)
                                                                                          ggTGGCGGGCTATGCCTTGGGCGGCGGCTGCGAACTCGCCATGATGTGCGACTTCATTCTTTGCGCCGAGAATGCGAAATTCGGCCAGCCCGAGATCAATc            >  1:3281447/1‑101 (MQ=255)
                                                                                          ggTGGCGGGCTATGCCTTGGGCGGCGGCTGCGAACTCGCCATGATGTGCGACTTCATTCTTTGCGCCGAGAATGCGAAATTCGGCCAGCCCGAGATCAATc            >  2:2946372/1‑101 (MQ=255)
                                                                                           gTGGCGGGCTATGCCTTGGGCGGCGGCTGCGAACTCGCCATGATGTGCGACTTCATTCTTTGCGCCGAGAATGCGAAATTCGGCCAGCCCGAGATCAATCt           <  2:4038649/101‑1 (MQ=255)
                                                                                             ggCGGGCTATGCCTTGGGCGGCGGCTGCGAACTCGCCATGATGTGCGACTTCATTCTTTGCGCCGAGAATGCGAAATTCGGCCAGCCCGAGATCAATCTgg         <  2:122352/101‑1 (MQ=255)
                                                                                             ggCGGGCTATGCCTTGGGCGGCGGCTGCGAACTCGCCATGATGTGCGACTTCATTCTTTGCGCCGAGAATGCGAAATTCGGCCAGCCCGAGATCAATCTgg         <  2:2027889/101‑1 (MQ=255)
                                                                                              gCGGGCTATGCCTTGGGCTGCGGCTGCGAACTCGCCATGATGTGCGACTTCATTCTTTGCGCCGAGAATGCGAAATTCGGCCAGCCCGAGATCAATCTggg        <  2:4661071/101‑1 (MQ=255)
                                                                                              gCGGGCTATGCCTTGGGCGGCGGCTGCGAACTCGCCATGATGTGCGACTTCATTCTTTGCGCCGAGAATGCGAAATTCGGCCAGCCCGAGATCAATCTggg        <  1:2693713/101‑1 (MQ=255)
                                                                                                 ggCTATGCCTTGGGCGGCGGCTGCGAACTCGCCATGATGTGCGACTTCATTCTTTGCGCCGAGAATGCGAAATTCGGCCAGCCCGAGATCAATCTGGCcgt     >  2:2202128/1‑101 (MQ=255)
                                                                                                    tATGCCTTGGGCGGCGGCTGCGAACTCGCCATGATGTGCGACTTCATTCTTTGCGCCGAGAATGCGAAATTCGGCCAGCCCGAGATCAATCTGGGcgtcgt  <  1:3457236/101‑1 (MQ=255)
                                                                                                    tATGCCTTGGGCGGCGGCTGCGAACTCGCCATGATGTGCGACTTCATTCTTTGCGCCGAGAATGCGAAATTCGGCCAGCCCGAGATCAATCTGGGcgtcgt  >  1:2828331/1‑101 (MQ=255)
                                                                                                    |                                                                                                    
CGACAAGAGCTTTGTCGACATGCTCAAGCTGGATTTCTTCGGCACCGAGGGCGATGCGATCCTGCGCACGCGCAAACCGGTCATCGCGGCGGTGGCGGGCTATGCCTTGGGCGGCGGCTGCGAACTCGCCATGATGTGCGACTTCATTCTTTGCGCCGAGAATGCGAAATTCGGCCAGCCCGAGATCAATCTGGGCGTCGT  >  NC_014034/3737877‑3738077

Base quality scores:  ATCG  < 3 ≤  ATCG  < 20 ≤  ATCG  < 29 ≤  ATCG  < 34 ≤  ATCG  < 41 ≤  ATCG