New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_014034 | 2067448 = | 208 (0.930) | 2 (0.010) | 2/188 | 37.5 | 0.02 | coding (434/2241 nt) | RCAP_rcc01913 | MerR family transcriptional regulator |
? | NC_014034 | 3051985 = | NA (NA) | coding (812/1971 nt) | acsA3 | acetate‑‑CoA ligase | |||||
Rejected: Position hash score below cutoff. |
CTTTTGTACCTGATGGAGCACGTCAGCCCGGAATGCCCGCCCCGCCCGATGAATGCGGAAGATCCGCTCTTCATCCTCTACACCTCGGGCTCGACCGGCAAACCCAAAGGCGTCGTGCATACGACCGGCGGCTACCTCGTCTATGCCGCGATGACGC > NC_014034/3051897‑3052053
|
cTTTTGTACCTGATGGAGCACGTCAGCCCGGAATGCCCGCCCCGCCCGATGAATGCGGAAGATCCGCTCTTCATCCTCTACACCTCGATCCCGAcctgggt < 2:3143859/101‑6 (MQ=1)
ggAAGATCCGCTCTTCATCCTCTACACCTCGGGCTCGACCGGCAAACCCAAAGGCGTCGTGCATAGGACCGGTGGCTACTTCGTCTGTGGCGAGCGGACGc > 2:307382/1‑101 (MQ=1)
|
CTTTTGTACCTGATGGAGCACGTCAGCCCGGAATGCCCGCCCCGCCCGATGAATGCGGAAGATCCGCTCTTCATCCTCTACACCTCGGGCTCGACCGGCAAACCCAAAGGCGTCGTGCATACGACCGGCGGCTACCTCGTCTATGCCGCGATGACGC > NC_014034/3051897‑3052053
Base quality scores: 
ATCG
< 3 ≤
ATCG
< 8 ≤
ATCG
< 17 ≤
ATCG
< 27 ≤
ATCG
< 38 ≤
ATCG
|