BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	= 440018	139 (0.640)	51 (0.240)	6/182	32.5	0.32	intergenic (+53/+3)	RCAP_rcc00411/RCAP_rcc00412	S58 family peptidase/arylformamidase
*	?	NC_014034	1640015 =	78 (0.330)	51 (0.240)	6/182	32.5	0.32	intergenic (+95/‑50)	mccB/mccA	methylcrotonoyl‑CoA carboxylase subunit beta/methylcrotonoyl‑CoA carboxylase subunit alpha
Rejected: Position hash score below cutoff.

Only 100 of 122 total aligned reads displayed.


TCCGGCGGGGATATTTGGGGC.AAGATGAAACCCATCCCTTT.CATCTTGCCCCAAATATCCCGGGGGGCC.C..GGGG.....G.....C.G.....C....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTGTCGGGTG  >  NC_014034/1639932‑1640115


tCCGGCGGGGATATTTGGGGC.AAGATGAAAACCATCCCTTT.TATCTTGCCCCAAATATCCCCGGGGGCC.C..GGGGGGCA.G.....C.G.....C....CCCCCGCCCCCTCCGcccc                                                                                         >  2:2949799/1‑99 (MQ=18)


 ccGGCGGGGATATTTGGGGC.AAGATGAAACCCATCCCTTT.CATCTTGCCCCAAATATCCCGGGGGGCC.C..GGGGGGCA.G.....C.G.....C....CCCCCCCCACCTCCGCCCCg                                                                                        >  2:1849659/1‑101 (MQ=18)


     cggGGATATTTGGGGC.AAGATGAAACCCATCCCTTT.CATCTTGCCCCAAATATCCCGGGGGGCC.C..GGGGGGCA.G.....C.G.....C....CCCCCGCCACTTCCGCCACGGGGc                                                                                    >  2:4215023/1‑101 (MQ=25)


      ggggATATTTGGGGC.AAGATGAAACCCATCCCTTT.CATCTTGCCCCAAATATCCCGGGGGGCC.C..GGGGGGCA.G.....C.G.....C....CCCCCGCCCCTCCCGCCACGGGGcg                                                                                   >  2:1886278/1‑100 (MQ=18)


      ggggATATTTGGGGC.AAGATGAAACCCATCCCTTT.CATCTTGCCCCAAATATCCCGGGGGGCC.C..GGGGGGCA.G.....C.G.....C....CCCCCGCCACTTCCGCCACGGGGCa                                                                                   >  2:3166966/1‑101 (MQ=25)


      ggggAT.TTTTGGGC.AAAGTTAACCCCCCCCCTTT.CTCTTTCCCCCAAATTACCGGGGGGGCC.G..GGGG.....G.....G.GCCCCCC....CCCCCGCCACTTCCGCCACGGGGCa                                                                                   <  1:1226654/101‑1 (MQ=255)


      gggattatTGGGCGA.AAGAT.AAACCCCACCCTTT.TCTTTTGCCCCCAAATCCCCGGGGGGCC.G..GGGG.....GGGCCCC.C.....C....CCCCCGCCACTTCCGCCACGGGGCa                                                                                   <  2:1272302/96‑1 (MQ=255)


       ggggtttttGGGGAAAAGATAAAACCCACCCCTTT.CATCTTGCCCAAAATA.CCCGGGGGGCC.C..GGGGGGGCAG.....C.C.....C....CCCCCGCCACTTCCGCCACGGGGCa                                                                                   <  2:1528318/95‑1 (MQ=9)


       gggATATTTGGGGC.AAGATGAAACCCATCCCTTT.CATCTTGCCCCAAATATCCCGGGGGGCC.C..GGGGGGCA.G.....C.G.....C....CCCCCGCCACTTCCGCCACGGGGCAg                                                                                  >  2:2360976/1‑101 (MQ=25)


       gggATATTTGGGGC.AAGATGAAACCCATCCCTTT.CATCTTGCCCCAAATATCCCGGGGGGCC.C..GGGGGGCA.G.....C.G.....C....CCCCCCCCACTTCCGCCACGGGGCAg                                                                                  >  2:869358/1‑101 (MQ=21)


           ttttgggggA.AAGATAACCCCCCCCCTTTT.CATCTTCCCCAAAATCCCCGGGGGGGCCGG..GGGG.....G.....C.GCCC..C....CCCCCGCCACTTCCGCCACGGGGCAGCGcc                                                                              <  1:2865124/96‑1 (MQ=255)


           tatTTGGGGC.AAGATGAAACCCATCCCTTT.CATCTTGCCCCAAATATCCCGGGGGGCC.C..GGGGGGCA.G.....C.G.....C....CCCCCGCCACTTCCGCCACGGGGCAGCGcc                                                                              >  2:4414143/1‑101 (MQ=25)


           tatTTGGGGC.AAGATGAAACCCATCCCTTT.CATCTTGCCCCAAATATCCCGGGGGGCC.C..GGGGGGCA.G.....C.G.....C....CCCCCGCCACTTCCGCCACGGGGCAGCGcc                                                                              >  2:2465541/1‑101 (MQ=21)


           tatTTGGGGC.AAGATGAAACCCATCCCTTT.CATCTTGCCCCAAATATCCCGGGGGGCC.C..GGGGGGCA.G.....C.G.....C....CCCCCGCCACTTCCGACACGGGGCAgcgac                                                                              >  2:497705/1‑99 (MQ=21)


            atTTGGGGC.AAGATGAAACCCATCCCTTT.CATCTTGCCCCAAATATCCCGGGGGGCC.C..GGGGGGCA.G.....C.G.....C....CCCCCGCCACTTCCGCCACGGGGCAGCGccc                                                                             >  2:2724658/1‑101 (MQ=25)


            atTTGGGGC.AAGATGAAACCCATCCCTTT.CATCTTGCCCCAAATATCCCGGGGGGCC.C..GGGG.....G.....G.G.....CGGCGCCCCCGCCCCCTCCCCCCCCGGGCAGCGccc                                                                             >  2:1595201/1‑101 (MQ=18)


             tttGGGGA.CAAAAGAAACCCCTCCCTTT.TGTTCTCCCCCAAACTCCCGGGGGGGCG.CGGGGGG.....G.....C.GCCC..C....CCCCCGCCACTTCCGCCACGGGGCAGCGccc                                                                             <  2:4482336/101‑1 (MQ=255)


              ttGGGGC.AAGATGAAACCCATCCCTTT.CATCTTGCCCCAAATATCCCGGGGGGCC.C..GGGGGGCA.G.....C.G.....C....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCg                                                                           >  2:2452655/1‑101 (MQ=25)


               tGGGGC.AAGATGAAACCCATCCCTTT.CATCTTGCCCCAAATATCCCGGGGGGCC.C..GGGGGGCA.G.....C.G.....C....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCgg                                                                          >  2:2578617/1‑101 (MQ=25)


               tGGGGC.AAGATGAAACCCATCCCTTT.CATCTTGCCCCAAATATCCCGGGGGGCC.C..GGGGGGCA.G.....C.G.....C....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCgg                                                                          >  2:1843511/1‑101 (MQ=25)


                 gacc.AAGATCAACCCCCCCCCTTC.CATC.TCCCCCAAATTCCCCGGGGGGCC.C..GGGG.....GGCCCCC.C.....C....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGcc                                                                        <  2:3473768/98‑1 (MQ=255)


                    c.AAGATGAAACCCATCCCTTT.CATCTTGCCCCAAATATCCCGGGGGGCC.C..GGGGGGCA.G.....C.G.....C....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGtt                                                                     >  2:255102/1‑101 (MQ=25)


                     gcaaaagAAACCCCCCCCTTTCCATCTCCCCCCAAATA.CCGGGGGGGCC.C..GGGG.....GGGC..C.GCC...C....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGt                                                                      <  1:1355929/95‑1 (MQ=255)


                       aGATGAACCCCACCCTTTT.CATCTGCCCCCAAATACCCCGGGGGGCC.G..GGGG.....G.....CAGCC...C....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGAc                                                                  <  1:4201770/101‑1 (MQ=255)


                       aGATGAAACCCATCCCTTT.CATCTTGCCCCAAATATCCCGGGGGGCC.C..GGGGGGCA.G.....C.G.....C....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGa                                                                   >  1:4239857/1‑101 (MQ=25)


                       aGATGAAACCCATCCCTTT.CATCTTGCCCCAAATATCCCGGGGGGCC.C..GGGGGGCA.G.....C.G.....C....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGa                                                                   >  1:2492883/1‑101 (MQ=25)


                       aGATGAAACCCATCCCTTT.CATCTTGCCCCAAATATCCCGGGGGGCC.C..GGGGGGCA.G.....C.G.....C....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGa                                                                   >  1:3003873/1‑101 (MQ=25)


                        gATGAAACCCATCCCTTT.CATCTTGCCCCAAATATCCCGGGGGGCC.C..GGGGGGCA.G.....C.G.....C....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGAc                                                                  >  1:198338/1‑101 (MQ=25)


                         aTGAAACCCATCCCTTT.CATCATGCCCCAAATATCCCGGGGGGCC.C..GGGGGGCA.G.....C.G.....C....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACg                                                                 >  1:2645942/1‑101 (MQ=25)


                           gAAACCCATCCCTTT.CATCTTGCCCCAAATATCCCGGGGGGCC.C..GGGGGGCA.G.....C.G.....C....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGaa                                                               >  2:3752605/1‑101 (MQ=25)


                            aaaCCCATCCCTTT.CATCTTGCCCCAAATATCCCGGGGGGCC.C..GGGGGGCA.G.....C.G.....C....CCCCCGCCACTTCCGCCACGGGGCCGCGCCCCCGCCGTTGACGAAg                                                              >  2:1581271/1‑101 (MQ=21)


                            aaaCCCATCCCTTT.CATCTTGCCCCAAATATCCCGGGGGGCC.C..GGGGGGCA.G.....C.G.....C....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAg                                                              >  2:190887/1‑101 (MQ=25)


                             aaCCCATCCCTTT.CATCTTGCCCCAAATATCCCGGGGGGCC.C..GGGGGGCA.G.....C.G.....C....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAgg                                                             >  2:4326659/1‑101 (MQ=25)


                             aaCCCATCCCTTT.CATCTTGCCCCAAATATCCCGGGGGGCC.C..GGGGGGCA.G.....C.G.....C....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAgg                                                             >  1:3136026/1‑101 (MQ=25)


                              cccccccctttt.CTTCTT.CCCCAAAATCCCCGGGGGGCC.C..GGGG.....GGGC..C.GCC...C....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGga                                                            <  1:3067678/92‑1 (MQ=255)


                               cccATCCCTTT.CATCTTGCCCCAAATATCCCGGGGGGCC.C..GGGGGGCA.G.....C.G.....C....CCCCCGCCACTTCCGCCACGGGGCCGCGCCCCGGCCGTTGACGAAgggg                                                           >  2:826190/1‑99 (MQ=21)


                                ccATCCCTTT.CATCTTGCCCCAAATATCCCGGGGGGCC.C..GGGGGGCA.G.....C.G.....C....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGgaga                                                          >  1:2833371/1‑101 (MQ=25)


                                  aTCCCTTT.CATCTTGCCCCAAATATCCCGGGGGGCC.C..GGGGGGCA.G.....C.G.....C....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGAcc                                                        >  1:2122948/1‑101 (MQ=25)


                                  aTCCCTTT.CATCTTGCCCCAAATATCCCGGGGGGCC.C..GGGGGGCA.G.....C.G.....C....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGAcc                                                        >  2:2914303/1‑101 (MQ=25)


                                   tCCCTTT.CATCTTGCCCCAAATATCCCGGGGGGCC.C..GGGGGGCA.G.....C.G.....C....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACcg                                                       >  1:3846642/1‑101 (MQ=25)


                                   tCCCTTT.CATCTTGCCCCAAATATCCCGGGGGGCC.C..GGGGGGCA.G.....C.G.....C....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACcg                                                       >  1:83676/1‑101 (MQ=21)


                                     ccTTT.CCTTTTGCCCCAAAATCCCCGGGGGGCC.G..GGGG.....GGCCCCC.C.....C....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACtgc                                                      <  2:1232427/101‑1 (MQ=255)


                                     ccTTT.CATCTTGCCCCAAATATCCCGGGGGGCC.C..GGGGGGCA.G.....C.G.....C....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGCAGGAGACcgcg                                                     >  2:1603274/1‑101 (MQ=21)


                                     ccTTT.CATCTTGCCCCAAATATCCCGGGGGGCC.C..GGGGGGCA.G.....C.G.....C....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACcgcg                                                     >  1:3621634/1‑101 (MQ=25)


                                     ccTTT.CATCTTGCCCCAAATATCCCGGGGGGCC.C..GGGGGGCA.G.....C.G.....C....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACcgcg                                                     >  1:1338230/1‑101 (MQ=25)


                                         ttccccTTCCCCCAAATGCCCCGGGGGGCC.C..GGGG.....GGC...C.GCCC..C....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGAt                                                   <  2:3373699/96‑1 (MQ=255)


                                         t.CATCTTGCCCCAAATATCCCGGGGGGCC.C..GGGGGGCA.G.....C.G.....C....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGt                                                 >  2:3346597/1‑101 (MQ=25)


                                         t.CATCTTGCCCCAAATATCCCGGGGGGCC.C..GGGGGGCA.G.....C.G.....C....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGt                                                 >  2:3558206/1‑101 (MQ=25)


                                         t.CATCTTGCCCCAAATATCCCGGGGGGCC.C..GGGGGGCA.G.....C.G.....C....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGt                                                 >  1:3649654/1‑101 (MQ=25)


                                         t.CATCTTGCCCCAAATATCCCGGGGGGCC.C..GGGGGGCA.G.....C.G.....C....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGt                                                 >  2:3796993/1‑101 (MQ=25)


                                           cATCTTGCCCCAAATATCCCGGGGGGCC.C..GGGGGGCA.G.....C.G.....C....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGtt                                                >  2:3897908/1‑101 (MQ=25)


                                           cATCTTGCCCCAAATATCCCGGGGGGCC.C..GGGGGGCA.G.....C.G.....C....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGtt                                                >  1:3058043/1‑101 (MQ=25)


                                            aTCTTGCCCCAAATATCCCGGGGGGCC.C..GGGGGGCA.G.....C.G.....C....CCCCCCCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGttt                                               >  1:1897689/1‑101 (MQ=25)


                                                tGCCCCAAATATCCCGGGGGGCC.C..GGGGGGCA.G.....C.G.....C....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCaaa                                           >  1:1549628/1‑101 (MQ=25)


                                                  ccccAAATATCCCGGGGGGCC.C..GGGGGGCA.G.....C.G.....C....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAg                                         >  1:2541920/1‑101 (MQ=25)


                                                  ccccAAATATCCCGGGGGGCC.C..GGGGGGCA.G.....C.G.....C....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCAGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAg                                         >  2:3654005/1‑101 (MQ=25)


                                                      aaaTATCCCGGGGGGCC.C..GGGGGGCA.G.....C.G.....C....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATcc                                     >  1:1182454/1‑101 (MQ=25)


                                                       aaTATCCCGGGGGGCC.C..GGGGGGCA.G.....C.G.....C....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCt                                    >  2:2849596/1‑101 (MQ=25)


                                                       aaTATCCCGGGGGGCC.C..GGGGGGCA.G.....C.G.....C....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCt                                    >  1:695372/1‑101 (MQ=25)


                                                        atatCCCGGGGGGCC.C..GGGGGGCA.G.....C.G.....C....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTg                                   >  2:3511336/1‑101 (MQ=37)


                                                        atatCCCGGGGGGCC.C..GGGGGGCA.G.....C.G.....C....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTg                                   >  2:645818/1‑101 (MQ=37)


                                                        atatCCCGGGGGGCC.C..GGGGGGCA.G.....C.G.....C....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTg                                   >  2:449998/1‑101 (MQ=37)


                                                         tatCCCGGGGGGCC.C..GGGGGGCA.G.....C.G.....C....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGa                                  >  1:3437014/1‑101 (MQ=37)


                                                          atCCCGGGGGGCC.C..GGGGGGCA.G.....C.G.....C....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGAt                                 >  2:2788189/1‑101 (MQ=37)


                                                          atCCCGGGGGGCC.C..GGGGGGCA.G.....C.G.....C....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGGTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGac                                 >  2:3661330/1‑100 (MQ=25)


                                                            cccGGGGGGCC.C..GGGGGGCA.G.....C.G.....C....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCg                               >  1:3028055/1‑101 (MQ=37)


                                                             ccGGGGGGCC.C..GGGGGGCA.G.....C.G.....C....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGc                              >  1:1907525/1‑101 (MQ=37)


                                                              cGGGGGGCC.C..GGGGGGCA.G.....C.G.....C....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTNAAAAGATCCTGATCGcc                             >  2:892503/1‑101 (MQ=37)


                                                              cGGGGGGCC.C..GGGGGGCA.G.....C.G.....C....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGcc                             >  2:4353945/1‑101 (MQ=37)


                                                              cGGGGGGCC.C..GGGGGGCA.G.....C.G.....C....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGcc                             >  1:4382835/1‑101 (MQ=37)


                                                                           cggggggcag.....c.g.....c....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGcc                    >  2:938051/10‑101 (MQ=255)


                                                                            ggggggcag.....c.g.....c....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCg                   >  2:4586190/9‑101 (MQ=255)


                                                                            ggggggcag.....c.g.....c....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCg                   >  1:1753373/9‑101 (MQ=255)


                                                                            ggggggcag.....c.g.....c....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCg                   >  1:991799/9‑101 (MQ=255)


                                                                            ggggggcag.....c.g.....c....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCg                   >  1:733607/9‑101 (MQ=255)


                                                                            ggggggcag.....c.g.....c....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCg                   >  1:3827010/9‑101 (MQ=255)


                                                                            ggggggcag.....c.g.....c....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCg                   >  1:2907105/9‑101 (MQ=255)


                                                                            ggggggcag.....c.g.....c....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCg                   >  1:2394281/9‑101 (MQ=255)


                                                                               gggcag.....c.g.....c....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCgaga                >  1:2811728/6‑101 (MQ=255)


                                                                                  cag.....c.g.....c....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCg             >  2:1192324/3‑101 (MQ=255)


                                                                                  cag.....c.g.....c....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCg             >  2:3318101/3‑101 (MQ=255)


                                                                                        ggggccccccc....cccccGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCga                  <  1:43679/91‑1 (MQ=255)


                                                                                        ccactcccccc....cccccCCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCga                  <  1:1633668/91‑1 (MQ=255)


                                                                                         ggggcccccc....cccccGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCgag                 <  1:1775819/92‑1 (MQ=255)


                                                                                          c.g.....c....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCt          >  1:4665710/1‑101 (MQ=255)


                                                                                           ggccgccc....cccccGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGAt               <  1:1973800/94‑1 (MQ=255)


                                                                                            ggccccc....cccccGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATc              <  2:3564358/95‑1 (MQ=255)


                                                                                            g.....c....CCCCCGCCACTTCCGCCACGGGGCATCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTg         >  1:1189194/1‑101 (MQ=255)


                                                                                             cccccc....cccccGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCg             <  1:3847309/96‑1 (MQ=255)


                                                                                                 cc....ccccgGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTg         <  2:1884663/100‑1 (MQ=255)


                                                                                                  c....cccccGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTGt        <  2:1195592/101‑1 (MQ=255)


                                                                                                       cccccGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTGTc       >  2:27831/1‑101 (MQ=255)


                                                                                                        ccccGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTGTCg      <  1:112539/101‑1 (MQ=255)


                                                                                                         cccGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTGTCgg     >  2:251662/1‑101 (MQ=255)


                                                                                                          ccGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTGTCggg    <  2:3057799/101‑1 (MQ=255)


                                                                                                           cGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTGTCGGGt   >  2:3300413/1‑101 (MQ=255)


                                                                                                           cGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTGTCGGGt   <  1:3409126/101‑1 (MQ=255)


                                                                                                            gCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTGTCGGGTg  >  2:1445035/1‑101 (MQ=255)


                                                                                                            gCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTGTCGGGTg  >  1:3911308/1‑101 (MQ=255)


                                                                                                            gCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTGTCGGGTg  <  1:3752880/101‑1 (MQ=255)


TCCGGCGGGGATATTTGGGGC.AAGATGAAACCCATCCCTTT.CATCTTGCCCCAAATATCCCGGGGGGCC.C..GGGG.....G.....C.G.....C....CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTGTCGGGTG  >  NC_014034/1639932‑1640115

Base quality scores:


ATCG

< 3 ≤


ATCG

< 20 ≤


ATCG

< 29 ≤


ATCG

< 34 ≤


ATCG

< 41 ≤


ATCG