BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	= 476900	237 (1.100)	2 (0.010)	2/182	36.9	0.01	coding (404/2280 nt)	maeB1	malate dehydrogenase
*	?	NC_014034	= 2871580	198 (0.830)	2 (0.010)	2/182	36.9	0.01	coding (1163/1407 nt)	mdtK	multidrug resistance protein MdtK
Rejected: Position hash score below cutoff.

Only 100 of 218 total aligned reads displayed.


GAAGGCGAGGATGTAGCTGGCGGGCACGCCGACCAGCCAATAGCTGATCGTGGCGATCACCATCGGCACCCGGGTATCATGCACGCCGCGCAGCAGGCCCAGCGCCATCACCTGCGCCGCGTCGAAGAGCTGGAACAGCCCCGCCACGGCCAGAAGATGCGCGCCAAAGACCAGAATCTCGGCCGCCTCGGGCTTGGTGCG  >  NC_014034/2871480‑2871680


gAAGGCGAGGATGTAGCTGGCGGGCACGCCGACCAGCCAATAGCTGATCGTGGCGATCACCATCGGCACCCGGGTATCATGCACGCCGCGCAGCAGGCCCa                                                                                                      >  1:3970799/1‑101 (MQ=255)


 aaGGCGAGGATGTGGCTGGCGGGCACGCCGACCAGCCAATAGCTGATCGTGGCGATCACCATCGGCACCCGGGTATCATGCACGCCGCGCAGCAGGCCCAg                                                                                                     <  2:4572032/101‑1 (MQ=255)


 aaGGCGAGGATGTAGCTGGCGGGCACGCCGACCAGCCAATAGCTGATCGTGGCGATCACCATCGGCACCCGGGTATCATGCACGCCGCGCAGCAGGCCCAg                                                                                                     >  2:164191/1‑101 (MQ=255)


 aaGGCGAGGATGTAGCTGGCGGGCACGCCGACCAGCCAATAGCTGATCGTGGCGATCACCATCGGCACCCGGGTATCATGCACGCCGCGCAGCAGGCCCAg                                                                                                     <  1:1909759/101‑1 (MQ=255)


   ggCGAGGATGTAGCTGGCGGGCACGCCGACCAGCCAATAGCTGATCGTGGCGATCACCATCGGCACCCGGGTATCATGCACGCCGCGCAGCAGGCCCAgcg                                                                                                   <  2:3535547/101‑1 (MQ=255)


        ggATGTAGCTGGCGGGCACGCCGACCAGCCAATAGCTGATCGTGGCGATCACCATCGGCACCCGGGTATCATGCACGCCGCGCAGCAGGCCCAGTGCCATc                                                                                              >  1:740828/1‑101 (MQ=255)


        ggATGTAGCTGGCGGGCACGCCGACCAGCCAATAGCTGATCGTGGCGATCACCATCGGCACCCGGGTATCATGCACGCCGCGCAGCAGGCCCAGCGCCATc                                                                                              >  1:2138003/1‑101 (MQ=255)


          aTGTAGCTGGCGGGCACGCCGACCAGCCAATAGCTGATCGTGGCGATCACCATCGGCACCCGGGTATCATGCACGCCGCGCAGCAGGCCCAGCGCCATCAc                                                                                            >  1:3286642/1‑101 (MQ=255)


           tGTAGCTGGCGGGCACGCCGACCAGCCAATAGCTGATCGTGGCGATCACCATCGGCACCCGGGTATCATGCACGCCGCGCAGCAGGCCCAGCGCCATCAcc                                                                                           <  2:4455298/101‑1 (MQ=255)


           ggTAGCTGGCGGGCACGCCGCCCAGCCAATAGCTGATCGTGGCGATCACCATCGGCACCCGGGTATCATGCACGCCGCGCAGCAGGCCCAGCGCCATCAcc                                                                                           <  2:2292827/100‑1 (MQ=255)


            gTAGCTGGCGGGCACGCCGACCAGCCAATAGCTGATCGTGGCGATCACCATCGGCACCCGGGTATCATGCACGCCGCGCAGCAGGCCCAGCGCCATCACCt                                                                                          <  1:3808490/101‑1 (MQ=255)


             tAGCTGGCAGGCACGCCGACCAGCCAATAGCTGATCGTGGCGATCACCATCGGCACCCGGGTATCATGCACGCCGCGCAGCAGGCCCAGCGCCATCACCTg                                                                                         >  2:1747115/1‑101 (MQ=255)


              aGCTGGCGGGCACGCCGACCAGCCAATAGCTGATCGTGGCGATCACCATCGGCACCCGGGTATCATGCACGCCGCGCAGCAGGCCCAGCGCCATCACCTgc                                                                                        >  2:639256/1‑101 (MQ=255)


              aGCTGGCGGGCACGCCGACCAGCCAATAGCTGATCGTGGCGATCACCATCGGCACCCGGGTATCATGCACGCCGCGCAGCAGGCCCAGCGCCATCACCTgc                                                                                        >  2:26251/1‑101 (MQ=255)


              aGCTGGCGGGCACGCCGACCAGCCAATAGCGGATCGTGGCGATCACCATCGGCACCCGGGTATCATGCACGCCGCGCAGCAGGCCCAGCGCCATCACCTgc                                                                                        <  1:1860183/101‑1 (MQ=255)


                cTGGCGGGCACGCCGACCAGCCAATAGCTGATCGTGGCGATCACCATCGGCACCCGGGTATCATGCACGCCGCGCAGCAGGCCCAGCGCCATCACCTgcgc                                                                                      <  1:4396886/101‑1 (MQ=255)


                cTGGCGGGCACGCCGACCAGCCAATAGCTGATCGTGGCGATCACCATCGGCACCCGGGTATCATGCACGCCGCGCAGCAGGCCCAGCGCCATCACCTgcgc                                                                                      <  1:112115/101‑1 (MQ=255)


                cTGGCGGGCACGCCGACCAGCCAATAGCTGATCGTGGCGATCACCATCGGCACCCGGGTATCATGCACGCCGCGCAGCAGGCCCAGCGCCATCACCTgcgc                                                                                      <  1:2034563/101‑1 (MQ=255)


                 tGGCGGGCACGCCGACCAGCCAATAGCTGATCGTGGCGATCACCATCGGCACCCGGGTATCATGCACGCCGCGCAGCAGGCCCAGCGCCATCACCTGcgcc                                                                                     <  1:2183705/101‑1 (MQ=255)


                  ggCGGGCACGCCGACCAGCCAATAGCTGATCGTGGCGATCACCATCGGCACCCGGGTATCATGCACGCCGCGCAGCAGGCCCAGCGCCATCACCTGcgccg                                                                                    <  2:1566381/101‑1 (MQ=255)


                     gggCACGCCGACCAGCCAATAGCTGATCGTGGCGATCACCATCGGCACCCGGGTATCATGCACGCCGCGCAGCAGGCCCAGCGCCATCACCTGCGCCGCGt                                                                                 <  1:834371/101‑1 (MQ=255)


                         aCGCCGACCAGCCAATAGCTGATCGTGGCGATCACCATCGGCACCCGGGTATCATGCACGCCGCGCAGCAGGCCCAGCGCCATCACCTGCGCCGCGTCGaa                                                                             >  1:2463640/1‑101 (MQ=255)


                           gCCGCCCAGCCAATAGCTGATCGTGGCGATCACCATCGGCACCCGGGTATCATGCACGCCGCGCAGCAGGCCCAGCGCCATCACCTGCGCCGCGTCGAaga                                                                           <  1:2966585/101‑1 (MQ=255)


                           gCCGACCAGCCAATAGCTGATCGTGGCGATCACCATCGGCACCCGGGTATCATGCACGCCGCGCAGCAGGCCCAGCGCCATCACCTGCGCCGCGTCGAaga                                                                           <  2:1392608/101‑1 (MQ=255)


                            ccGACCAGCCAATAGCTGATCGTGGCGATCACCATCGGCACCCGGGTATCATGCACGCCGCGCAGCAGGCCCAGCGCCATCACCTGCGCCGCGTCGAagag                                                                          <  2:3692539/101‑1 (MQ=255)


                            ccGACCAGCCAATAGCTGATCGTGGCGATCACCATCGGCACCCGGGTATCATGCACGCCGCGCAGCAGGCCCAGCGCCATCACCTGCGCCGCGTCGAagag                                                                          >  2:3914628/1‑101 (MQ=255)


                              gACCAGCCAATAGCTGATCGTGGCGATCACCATCGGCACCCGGGTATCATGCACGCCGCGCAGCAGGCCCAGCGCCATCACCTGCGCCGCGTCGAAGAGCt                                                                        <  2:1082899/101‑1 (MQ=255)


                              gACCAGCCAATAGCTGATCGTGGCGATCACCATCGGCACCCGGGTATCATGCACGCCGCGCAGCAGGCCCAGCGCCATCACCTGCGCCGCGTCGAAGAGCt                                                                        >  2:714144/1‑101 (MQ=255)


                                ccAGCCAATAGCTGATCGTGGCGATCACCATCGGCACCCGGGTATCATGCACGCCGCGCAGCAGGCCCAGCGCCATCACCTGCGCCGCGTCGAAGAGCTgg                                                                      >  2:2820186/1‑101 (MQ=255)


                                 cAGCCAATAGCTGATCGTGGCGATCACCATCGGCACCCGGGTATCATGCACGCCGCGCAGCAGGCCCAGCGCCATCACCTGCGCCGCGTCGAAGAGCTGGa                                                                     >  1:1381976/1‑101 (MQ=255)


                                 cAGCCAATAGCTGATCGTGGCGATCACCATCGGCACCCGGGTATCATGCACGCCGCGCAGCAGGCCCAGCGCCATCACCTGCGCCGCGTCGAAGAGCTGGa                                                                     >  1:2732349/1‑101 (MQ=255)


                                 cAGCCAATAGCTGATCGTGGCGATCACCATCGGCACCCGGGTATCATGCACGCCGCGCAGCAGGCCCAGCGCCATCACCTGCGCCGCGTCGAAGAGCTGGa                                                                     >  2:480684/1‑101 (MQ=255)


                                  aGCCAATAGCTGATCGTGGCGATCACCATCGGCACCCGGGTATCATGCACGCCGCGCAGCAGGCCCAGCGCCATCACCTGCGCCGCGTCGAAGAGCTGGaa                                                                    <  1:768506/101‑1 (MQ=255)


                                    ccAATAGCTGATCGTGGCGATCACCATCGGCACCCGGGTATCATGCACGCCGCGCAGCAGGCCCAGCGCCATCACCTGCGCCGCGTCGAAGAGCTGGAACa                                                                  <  1:4659685/101‑1 (MQ=255)


                                    ccAATAGCTGATCGTGGCGATCACCATCGGCACCCGGGTATCATGCACGCCGCGCAGCAGGCCCAGCGCCATCACCTGCGCCGCGTCGAAGAGCTGGAACa                                                                  >  1:2228320/1‑101 (MQ=255)


                                     cAATAGCTGATCGTGGCGATCACCATCGGCACCCGGGTATCATGCACGCCGCGCAGCAGGCCCAGCGCCATCACCTGCGCCGCGTCGAAGAGCTGGAACAg                                                                 <  2:1335357/101‑1 (MQ=255)


                                     cAATAGCTGATCGTGGCGATCACCATCGGCACCCGGGTATCATGCACGCCGCGCAGCAGGCCCAGCGCCATCACCTGCGCCGCGTCGAAGAGCTGGAACAg                                                                 <  1:101022/101‑1 (MQ=255)


                                         aGCTGATCGTGGCGATCACCATCGGCACCCGGGTATCATGCACGCCGCGCAGCAGGCCCAGCGCCATCACCTGCGCCGCGTCGAAGAGCTGGAACAGcccc                                                             <  2:1285360/101‑1 (MQ=255)


                                          gCTGATCGTGGCGATCACCATCGGCACCCGGGTATCATGCACGCCGCGCAGCAGGCCGAGCGCCATCACCTGCGCCGCGTCGAAGAGCTGGAACAGCCCCg                                                            <  2:1204396/101‑1 (MQ=255)


                                          gCTGATCGTGGCGATCACCATCGGCACCCGGGTATCATGCACGCCGCGCAGCAGGCCCAGCGCCATCACCTGCGCCGCGTCGAAGAGCTGGAACAGCCCCg                                                            <  2:3970514/101‑1 (MQ=255)


                                            tGATCGTGGCGATCACCATCGGCACCCGGGTATCATGCACGCCGCGCAGCAGGCCCAGCGCCATCACCTGCGCCGCGTCGAAGAGCTGGAACAGCCCCGcc                                                          >  1:3227793/1‑101 (MQ=255)


                                            tGATCGTGGCGATCACCATCGGCACCCGGGTATCATGCACGCCGCGCAGCAGGCCCAGCGCCATCACCTGCGACGCGTCGAAGAGCTGGAACAGCCCCGcc                                                          >  2:2111750/1‑101 (MQ=255)


                                             gATCGTGGCGATCACCATCGGCCCCCGGGTATCATGCACGCCGCGCAGCAGGCCCAGCGCCATCCCCTGCGCCGCGTCGAAGAGCTGGAACAGCCCCGCCa                                                         <  1:1663683/101‑1 (MQ=255)


                                             gATCGTGGCGATCACCATCGGCACCCGGGTATCATGCACGCCGCGCAGCAGGCCCAGCGCCATCACCTGCGCCGCGTCGAAGAGCTGGAACAGCCCCGCCa                                                         >  1:2072508/1‑101 (MQ=255)


                                             gATCGTGGCGATCACCATCGGCACCCGGGTATCATGCACGCCGCGCAGCAGGCCCAGCGCCATCACCTGCGCCGCGTCGAAGAGCTGGAACAGCCCCGCCa                                                         <  1:2107690/101‑1 (MQ=255)


                                             gATCGTGGCGATCACCATCGGCACCCGGGTATCATGCACGCCGCGCAGCAGGCCCAGCGCCATCACCTGCGCCGCGTCGAAGAGCTGGAACAGCCCCGCCa                                                         >  2:368062/1‑101 (MQ=255)


                                             gATCGTGGCGATCACCATCGGCACCCGGGTATCATGCACGCCGCGCAGCAGGCCCAGCGCCATCACCTGCGCCGCGTCGAAGAGCTGGAACAGCCCCGCCa                                                         >  2:3330421/1‑101 (MQ=255)


                                              aTCGTGGCGATCACCATCGGCACCCGGGTATCATGCACGCCGCGCAGCAGGCCCAGCGCCATCACCTGCGCCGCGTCGAAGAGCTGGAACAGCCCCGCCAc                                                        >  2:4553528/1‑101 (MQ=255)


                                              aTCGGGGCGATCCCCATCGCCACCCGGTTATCATGCCCGCCGCGCAGCAGGCCCAGCCCCATCCCCTGCGCCGCGTCGAAGAGCTGGAACAGCCCCGCCAc                                                        <  2:1766709/101‑1 (MQ=255)


                                                cGTGGCGATCCCCAGCGGCACCCGGGTATCATGCACGCCGCGCAGCAGGCCCAGCGCCATCACCTGCGCCGCGTCGAAGAGCTGGAACAGCCCCGCCACgg                                                      <  2:2072368/101‑1 (MQ=255)


                                                     cGATCACCATCGGCACCCGGGTATCATGCACGCCGCGCAGCAGGCCCAGCGCCATCACCTGCGCCGCGTCGAAGAGCTGGAACAGCCCCGCCACGGCCaga                                                 <  2:3957420/101‑1 (MQ=255)


                                                      gATCACCATCGGCACCCGGGTATCATGCACGCCGCGCAGCAGGCCCAGCGCCATCACCTGCGCCGCGTCGAAGAGCTGGAACAGCCCCGCCACGGCCagaa                                                >  2:1016508/1‑101 (MQ=255)


                                                      gATCACCATCGGCACCCGGGTATCATGCACGCCGCGCAGCAGGCCCAGCGCCATCACCTGCGCCGCGTCGAAGAGCTGGAACAGCCCCGCCACGGCCagaa                                                >  1:2764092/1‑101 (MQ=255)


                                                         cACCATCGGCACCCGGGTATCATGCACGCCGCGCAGCAGGCCCAGCGCCATCACCTGCGCCGCGTCGAAGAGCTGGAACAGCCCCGCCACGGCCAGAAGAt                                             >  2:2339178/1‑101 (MQ=255)


                                                         cACCATCGGCACCCGGGTATCATGCACGCCGCGCAGCAGGCCCAGCGCCATCACCTGCGCCGCGTCGAAGAGCTGGAACAGCCCCGCCACGGCCAGAAGAt                                             >  2:3137796/1‑101 (MQ=255)


                                                          aCCATCGGCACCCGGGTATCATGCACGCCGCGCAGCAGGCCCAGCGCCATCACCTGCGCCGCGTCGAAGAGCTGGAACAGCCCCGCCACGGCCAGAAGATg                                            >  1:3583362/1‑101 (MQ=255)


                                                          aCCATCGGCACCCGGGTATCATGCACGCCGCGCAGCAGGCCCAGCGCCATCACCTGCGCCGCGTCGAAGAGCTGGAACAGCCCCGCCACGGCCAGAAGATg                                            >  2:2557861/1‑101 (MQ=255)


                                                             aTCGGCACCCGGGTATCATGCACGCCGCGCAGCAGGCCCAGCGCCATCACCTGCGCCGCGTTGAAGAGCTGGAACAGCCCCGCCACGGCCAGAAGATgcgc                                         >  2:3488967/1‑101 (MQ=255)


                                                             aTCGGCACCCGGGTATCATGCACGCCGCGCAGCAGGCCCAGCGCCATCACCTGCGCCGCGTCGAAGAGCTGGAACAGCCCCGCCACGGCCAGAAGATgcgc                                         >  2:4367648/1‑101 (MQ=255)


                                                             aTCGGCACCCGGGTACCATGCACGCCGCGCAGCAGGCCCAGCCCAATCACCTGCGCCGCGTCGAAGAGCTGGAACAGCCCCGCCACGGCCAGAAGATgcgc                                         <  1:1333080/101‑1 (MQ=255)


                                                               cGGCACCCGGGTATCATGCACGCCGCGCAGCAGGCCCAGCGCCATCACCTGCGCCGCGTCGAAGAGCTGGAACAGCCCCGCCACGGCCAGAAGATgcgcgc                                       >  2:2939507/1‑101 (MQ=255)


                                                                ggCACCCGGGTATCATGCACGCCGCGCAGCAGGCCCAGCGCCATCACCTGCGCCGCGTCGAAGAGCTGGAACAGCCCCGCCACGGCCAGAAGATGCGCGcc                                      >  2:650831/1‑101 (MQ=255)


                                                                ggCACCCGGGTATCATGCACGCCGCGCAGCAGGCCCAGCGCCATCACCTGCGCCGCGTCGAAGAGCTGGAACAGCCCCGCCACGGCCAGAAGATGCGCGcc                                      >  2:4445317/1‑101 (MQ=255)


                                                                 gcccccGGGTATCATGCACGCCGCGCAGCAGGCCCAGCGCCATCCCCTGCGCCGCGTCGAAGAGCTGGAACAGCCCCGCCACGGCCAGAAGATGCGCGCCa                                     <  1:418309/98‑1 (MQ=255)


                                                                 gcccccGGGTATCATGCACGCCGCGCAGCAGGCCCAGCGCCATCACCTGCGCCGCGTCGAAGAGCTGGAACAGCCCCGCCACGGCCAGAAGATGCGCGCCa                                     <  2:2365077/98‑1 (MQ=255)


                                                                 gCACCCGGGTATCATGCACGCCGCGCAGCAGGCCCAGCGCCATCACCTGCGCCGCGTCGAAGAGCTGGAACAGCCCCGCCACGGCCAGAAGATGCGCGCCa                                     <  2:765622/101‑1 (MQ=255)


                                                                 gCACCCGGGTATCATGCACGCCGCGCAGCAGGCCCAGCGCCATCACCTGCGCCGCGTCGAAGAGCTGGAACAGCCCCGCCACGGCCAGAAGATGCGCGCCa                                     >  2:190804/1‑101 (MQ=255)


                                                                 gCACCCGGGTATCATGCACGCCGCGCAGCAGGCCCAGCGCCATCACCTGCGCCGCGTCGAAGAGCTGGAACAGCCCCGCCACGGCCAGAAGATGCGCGCCa                                     >  1:3381420/1‑101 (MQ=255)


                                                                  cccccGGGTATCATGCACGCCGCGCAGCAGGCCCAGCGCCATCACCTGCGCCGCGTCGAAGAGCTGGAACAGCCCCGCCACGGCCAGAAGATGCGCGCCaa                                    <  2:4060687/99‑1 (MQ=255)


                                                                  cACCCGGGTATCATGCACGCCGCGCAGCAGGCCCAGCGCCATCCCCTGCGCCGCGTCGAAGAGCGGGAACAGCCCCGCCACGGCCAGAAGATGCGCGCCaa                                    <  2:1381881/101‑1 (MQ=255)


                                                                   ccccGGGTATCATGCACGCCGCGCAGCAGGCCCAGCGCCATCACCTGCGCCGCGTCGAAGAGCTGGAACAGCCCCGCCACGGCCAGAAGATGCGCGCCaaa                                   <  1:1567694/100‑1 (MQ=255)


                                                                     ccGGGTATCATGCACGCCGCGCAGCAGGCCCAGCGCCATCACCTGCGCCGCGTCGAAGAGCTGGAACAGCCCCGCCACGGCCAGAAGATGCGCGCCAAAGa                                 <  1:514640/101‑1 (MQ=255)


                                                                      cGGGTATCATGCACGCCGCGCAGCAGGCCCAGCGCCATCACCTGCGCCGCGTCGAAGAGCTGGAACAGCCCCGCCACGGCCAGAAGATGCGCGCCAAAGAc                                >  1:1446321/1‑101 (MQ=255)


                                                                          tATCATGCACGCCGCGCAGCAGGCCCAGCGCCATCACCTGCGCCGCGTCGAAGAGCTGGAACAGCCCCGCCACGGCCAGAAGATGCGCGCCAAAGACCAGa                            <  2:2463474/101‑1 (MQ=255)


                                                                          tATCATGCACGCCGCGCAGCAGGCCCAGCGCCATCACCTGCGCCGCGTCGAAGAGCTGGAACAGCCCCGCCACGGCCAGAAGATGCGCGCCAAAGACCAGa                            >  1:4521229/1‑101 (MQ=255)


                                                                          tATCATGCACGCCGCGCAGCAGGCCCAGCGCCATCACCTGCGCCGCGTCGAAGAGCTGGAACAGCCCCGCCACGGCCAGAAGATGCGCGCCAAAGACCAGa                            <  1:3460563/101‑1 (MQ=255)


                                                                             cATGCACGCCGCGCAGCAGGCCCAGCGCCATCACCTGCGCCGCGTCGAAGAGCTGGAACAGCCCCGCCACGGCCAGAAGATGCGCGCCAAAGACCAGAAtc                         >  2:3192137/1‑101 (MQ=255)


                                                                              aTGCACGCCGCGCAGCAGGCCCAGCGCCATCACCTGCGCCGCGTCGAAGAGCTGGAACAGCCCCGCCACGGCCAGAAGATGCGCGCCAAAGACCAGAAtct                        >  2:3870854/1‑101 (MQ=255)


                                                                              aTGCACGCCGCGCAGCAGGCCCAGCGCCATCACCGGCGCCGCGTCGAAGAGCTGGAACAGCCCCGCCACGGCCAGAAGATGCGCGCCAAAGACCAGAAtct                        <  1:4409812/101‑1 (MQ=255)


                                                                               tGCACGCCGCGCCGCAGGCCCAGCGCCATCACCTGGGCCGCGTCGAAGAGCTGGAACAGCCCCGCCACGGCCAGAAGATGCGCGCCAAAGACCAGAAtctc                       <  2:410806/101‑1 (MQ=255)


                                                                                  aCGCCGCGCAGCAGGCCCAGCGCCATCCCCTGCGCCGCGTCGAAGAGCTGGAACAGCCCCGCCACGGCCAGAAGATGCGCGCCAAAGACCAGAATCTCGgc                    <  1:428303/101‑1 (MQ=255)


                                                                                  aCGCCGCGCAGCAGGCCCAGCGCCATCACCTGCGCCGCGTCGAAGAGCTGGAACAGCCCCGCCACGGCCAGAAGATGCGCGCCAAAGACCAGAATCTCGgc                    >  1:2924690/1‑101 (MQ=255)


                                                                                   cgccgcGCAGCAGGCCCAGCGCCATCACCTGCGCCGCGTCGAAGAGCTGGAACAGCCCCGCCACGGCCAGAAGATGCGCGCCAAAGACCAGAATCTCGgcc                   >  1:2241042/1‑101 (MQ=255)


                                                                                   cgccgcGCAGCAGGCCCAGCGCCATCACCTGCGCCGCGTCGAAGAGCTGGAACAGCCCCGCCACGGCCAGAAGATGCGCGCCAAAGACCAGAATCTCGgcc                   <  2:3541322/101‑1 (MQ=255)


                                                                                    gccgcGCAGCAGGCCCAGCGCCATCACCTGCGCCGCGTCGAAGAGCTGGAACAGCCCCGCCACGGCCAGAAGATGCGCGCCAAAGACCAGAATCTCGgccg                  >  1:3566770/1‑101 (MQ=255)


                                                                                       gcgcAGCAGGCCCAGCTCCATCACCTGCGCCGCGTCGAAGAGCTGGAACAGCTCCGCCACGGCCAGAAGATGCGCGCCAAAGCCCAGAACCTCGgccgccc               >  2:3099373/1‑100 (MQ=255)


                                                                                         gcagcaGGCCCAGCGCCATCACCTGCGCCGCGTCGAAGAGCTGGAACAGCCCCGCCACGGCCAGAAGATGCGCGCCAAAGACCAGAATCTCGGCCGCCTCg             <  1:1788178/101‑1 (MQ=255)


                                                                                         ccagcagGCCCCGCGCCCTCCCCCGCGCCCCGCCGAAGAGCTGGAACAGCCCCGCCACGGCCAGAAGATGCGCGCCAAAGACCAGAATCTCGGCCGCCTCg             <  1:2429193/100‑1 (MQ=255)


                                                                                          cagccgGCCGAGCTCTATCGCCTGCGCCGCGTCGAAGAGCTGGAACAGCCCCGCCACGGCCAGAAGATGCGCGCCAAAGACCAGAATCTCGGCCGCCTCgg            <  2:1138376/101‑1 (MQ=255)


                                                                                           agcagGCCCAGCGCCATCCCCTGCGCCGCGTCGAAGAGCTGGAACAGCCCCGCCACGGCCAGAAGATGCGCGCCAAAGATCAGAATCTCGGCCGCCTCggg           <  1:2639631/101‑1 (MQ=255)


                                                                                              ccgCCCAGCGCCTTCACCTGCCCCGCGTCTAAGAGCGGGAACACCCCCGCCACGGCCAGAAGATGCGCGCCAAAGACCAGAATCTCGGCCGCCTCGGGCtt        <  1:666438/99‑1 (MQ=255)


                                                                                              agGCCCAGCGCCCTCCCCTGCGCCGCGTCGAAGAGCGGGAACAGCCCCGCCACGGCCAGAAGATGCGCGCCAAAGACCAGAATCTCGGCCGCCTCGGGCtt        <  1:2387947/101‑1 (MQ=255)


                                                                                              agGCCCAGCGCCATCACCTGCGCCGCGTCGAAGAGCTGGAACAGCCCCGCCACGGCCAGAAGATGCGCGCCAAAGACCAGAATCTCGGCCGCCTCGGGCtt        >  1:2839974/1‑101 (MQ=255)


                                                                                              agGCCCAGCGCCACCACCTGCGCCGCGTCGAAGAGCTGGAACAGCCCCGCCACGGCCAGAAGATGCGCGCCAAAGACCAGAATCTCGGCCGCCTCGGGCtt        <  2:2834942/101‑1 (MQ=255)


                                                                                                gCCGAGCGCCATCCCCGGCGCCGCGGCGAAGAGCTGGAACAGCCCCGCCACGGCCAGAAGATGCGCGCCAAAGACCAGAATCTCGGCCGCCTCGGGCTTgg      <  2:4384888/101‑1 (MQ=255)


                                                                                                 cccAGCGCCATCCCCGGCGCCGCGTCGAAGAGCTGGAACAGCCCCGCCACGGCCAGAAGATGCGCGCCAAAGACCAGAATCTCGGCCGCCTCGGGCTTGGt     <  2:3389925/101‑1 (MQ=255)


                                                                                                 cccAGCGCCATCACCTGCGCCGCGTCGAAGAGCTGGAACAGCCCCGCCACGGCCAGAAGATGCGCGCCAAAGACCAGAATCTCGGCCGCCTCGGGCTTGGt     >  1:371623/1‑101 (MQ=255)


                                                                                                  ccAGCGCCATCCCCTGCGCCGCGTCGAAGAGCTGGAACAGCCCCGCCACGGCCAGAAGATGCGCGCCAAAGACCAGAATCTCGGCCGCCTCGGGCTTGGTg    <  1:306510/101‑1 (MQ=255)


                                                                                                   cAGCGCCATCACCTGCGCCGCGTCGAAGAGCGGGAACAGCCCCGCCACGGCCAGAAGATGCGCGCCAAAGACCAGAATCTCGGCCGCCTCGGGCTTGGTGc   <  2:1714181/101‑1 (MQ=255)


                                                                                                    aGCGCCATCACCTGCGCCGCGTCGAAGAGCTGGAACAGCCCCGCCACGGCCAGAAGATGCGCGCCAAAGACCAGAATCTCGGCCGCCTCGGGCTTGGTGCg  >  1:399975/1‑101 (MQ=255)


GAAGGCGAGGATGTAGCTGGCGGGCACGCCGACCAGCCAATAGCTGATCGTGGCGATCACCATCGGCACCCGGGTATCATGCACGCCGCGCAGCAGGCCCAGCGCCATCACCTGCGCCGCGTCGAAGAGCTGGAACAGCCCCGCCACGGCCAGAAGATGCGCGCCAAAGACCAGAATCTCGGCCGCCTCGGGCTTGGTGCG  >  NC_014034/2871480‑2871680

Base quality scores:


ATCG

< 3 ≤


ATCG

< 17 ≤


ATCG

< 25 ≤


ATCG

< 33 ≤


ATCG

< 40 ≤


ATCG