BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	= 799078	124 (0.600)	55 (0.270)	22/174	20.5	0.35	intergenic (+109/‑19)	sucB/lpdA1	dihydrolipoyllysine‑residue succinyltransferase/dihydrolipoyl dehydrogenase
*	?	NC_014034	1640019 =	79 (0.330)	55 (0.270)	22/174	20.5	0.35	intergenic (+99/‑46)	mccB/mccA	methylcrotonoyl‑CoA carboxylase subunit beta/methylcrotonoyl‑CoA carboxylase subunit alpha
Rejected: Position hash score below cutoff.

Only 100 of 128 total aligned reads displayed.


TCCGGCGGGGATATTTGGGGC.AAGATGAAACCCATCCCTTT.CATCTTGCCCCAAATATCCCGGGGGGCCC..GGGG.....G.....C.G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTGTCGGGTGATCG  >  NC_014034/1639932‑1640119


tCCGGCGGGGATATTTGGGGC.AAGATGAAAACCATCCCTTT.TATCTTGCCCCAAATATCCCCGGGGGCCC..GGGGGGCA.G.....C.G.....CCCCCCGCCCCCTCCGcccc                                                                                             >  2:2949799/1‑99 (MQ=18)


 ccGGCGGGGATATTTGGGGC.AAGATGAAACCCATCCCTTT.CATCTTGCCCCAAATATCCCGGGGGGCCC..GGGGGGCA.G.....C.G.....CCCCCCCCCACCTCCGCCCCg                                                                                            >  2:1849659/1‑101 (MQ=18)


     cggGGATATTTGGGGC.AAGATGAAACCCATCCCTTT.CATCTTGCCCCAAATATCCCGGGGGGCCC..GGGGGGCA.G.....C.G.....CCCCCCGCCACTTCCGCCACGGGGc                                                                                        >  2:4215023/1‑101 (MQ=25)


      ggggATATTTGGGGC.AAGATGAAACCCATCCCTTT.CATCTTGCCCCAAATATCCCGGGGGGCCC..GGGGGGCA.G.....C.G.....CCCCCCGCCCCTCCCGCCACGGGGcg                                                                                       >  2:1886278/1‑100 (MQ=18)


      ggggATATTTGGGGC.AAGATGAAACCCATCCCTTT.CATCTTGCCCCAAATATCCCGGGGGGCCC..GGGGGGCA.G.....C.G.....CCCCCCGCCACTTCCGCCACGGGGCa                                                                                       >  2:3166966/1‑101 (MQ=25)


      ggggAT.TTTTGGGC.AAAGTTAACCCCCCCCCTTT.CTCTTTCCCCCAAATTACCGGGGGGGCCG..GGGG.....G.....G.GCCCCCCCCCCCGCCACTTCCGCCACGGGGCa                                                                                       <  1:1226654/101‑1 (MQ=255)


      gggattatTGGGCGA.AAGAT.AAACCCCACCCTTT.TCTTTTGCCCCCAAATCCCCGGGGGGCCG..GGGG.....GGGCCCC.C.....CCCCCCGCCACTTCCGCCACGGGGCa                                                                                       <  2:1272302/96‑1 (MQ=255)


       ggggtttttGGGGAAAAGATAAAACCCACCCCTTT.CATCTTGCCCAAAATA.CCCGGGGGGCCC..GGGGGGGCAG.....C.C.....CCCCCCGCCACTTCCGCCACGGGGCa                                                                                       <  2:1528318/95‑1 (MQ=9)


       gggATATTTGGGGC.AAGATGAAACCCATCCCTTT.CATCTTGCCCCAAATATCCCGGGGGGCCC..GGGGGGCA.G.....C.G.....CCCCCCCCCACTTCCGCCACGGGGCAg                                                                                      >  2:869358/1‑101 (MQ=21)


          atatTTGGGGC.AAGATGAAACCCATCCCTTT.CATCTTGCCCCAAATATCCCGGGGGGCCC..GGGGGGCA.G.....C.G.....CCCCCCGCCACTTCCGCCACGGGGCAgcgc                                                                                   >  2:652466/1‑101 (MQ=25)


           tatTTGGGGC.AAGATGAAACCCATCCCTTT.CATCTTGCCCCAAATATCCCGGGGGGCCC..GGGGGGCA.G.....C.G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGcc                                                                                  >  2:2465541/1‑101 (MQ=21)


           tatTTGGGGC.AAGATGAAACCCATCCCTTT.CATCTTGCCCCAAATATCCCGGGGGGCCC..GGGGGGCA.G.....C.G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGcc                                                                                  >  2:4414143/1‑101 (MQ=25)


           tatTTGGGGC.AAGATGAAACCCATCCCTTT.CATCTTGCCCCAAATATCCCGGGGGGCCC..GGGGGGCA.G.....C.G.....CCCCCCGCCACTTCCGACACGGGGCAgcgac                                                                                  >  2:497705/1‑99 (MQ=21)


            atTTGGGGC.AAGATGAAACCCATCCCTTT.CATCTTGCCCCAAATATCCCGGGGGGCCC..GGGGGGCA.G.....C.G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGccc                                                                                 >  2:2724658/1‑101 (MQ=25)


            atTTGGGGC.AAGATGAAACCCATCCCTTT.CATCTTGCCCCAAATATCCCGGGGGGCCC..GGGGGGCA.G.....C.G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGccc                                                                                 >  2:30930/1‑101 (MQ=25)


             tttGGGGA.CAAAAGAAACCCCTCCCTTT.TGTTCTCCCCCAAACTCCCGGGGGGGCGCGGGGGG.....G.....C.GCCC..CCCCCCGCCACTTCCGCCACGGGGCAGCGccc                                                                                 <  2:4482336/101‑1 (MQ=255)


              ttGGGGC.AAGATGAAACCCATCCCTTT.CATCTTGCCCCAAATATCCCGGGGGGCCC..GGGGGGCA.G.....C.G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCg                                                                               >  2:2452655/1‑101 (MQ=25)


               tGGGGC.AAGATGAAACCCATCCCTTT.CATCTTGCCCCAAATATCCCGGGGGGCCC..GGGGGGCA.G.....C.G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCgg                                                                              >  2:2578617/1‑101 (MQ=25)


               tGGGGC.AAGATGAAACCCATCCCTTT.CATCTTGCCCCAAATATCCCGGGGGGCCC..GGGGGGCA.G.....C.G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCgg                                                                              >  2:3569181/1‑101 (MQ=25)


               tGGGGC.AAGATGAAACCCATCCCTTT.CATCTTGCCCCAAATATCCCGGGGGGCCC..GGGGGGCA.G.....C.G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCgg                                                                              >  2:1843511/1‑101 (MQ=25)


                     gcaaaagAAACCCCCCCCTTTCCATCTCCCCCCAAATA.CCGGGGGGGCCC..GGGG.....GGGC..C.GCC...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGt                                                                          <  1:1355929/95‑1 (MQ=255)


                       aGATGAACCCCACCCTTTT.CATCTGCCCCCAAATACCCCGGGGGGCCG..GGGG.....G.....CAGCC...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGAc                                                                      <  1:4201770/101‑1 (MQ=255)


                       aGATGAAACCCATCCCTTT.CATCTTGCCCCAAATATCCCGGGGGGCCC..GGGGGGCA.G.....C.G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGa                                                                       >  1:4239857/1‑101 (MQ=25)


                       aGATGAAACCCATCCCTTT.CATCTTGCCCCAAATATCCCGGGGGGCCC..GGGGGGCA.G.....C.G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGa                                                                       >  1:3003873/1‑101 (MQ=25)


                       aGATGAAACCCATCCCTTT.CATCTTGCCCCAAATATCCCGGGGGGCCC..GGGGGGCA.G.....C.G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGa                                                                       >  1:2492883/1‑101 (MQ=25)


                        gATGAAACCCATCCCTTT.CATCTTGCCCCAAATATCCCGGGGGGCCC..GGGGGGCA.G.....C.G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGAc                                                                      >  1:198338/1‑101 (MQ=25)


                         aTGAAACCCATCCCTTT.CATCATGCCCCAAATATCCCGGGGGGCCC..GGGGGGCA.G.....C.G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACg                                                                     >  1:2645942/1‑101 (MQ=25)


                           gAAACCCATCCCTTT.CATCTTGCCCCAAATATCCCGGGGGGCCC..GGGGGGCA.G.....C.G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGaa                                                                   >  2:3752605/1‑101 (MQ=25)


                            aacccccccccTTT.TCTCCTGCCCCAAAGTCCCCGGGGGGCCCGGGGGG.....G.....C.GCCC..CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGaa                                                                   <  2:2823794/93‑1 (MQ=255)


                            aaaCCCATCCCTTT.CATCTTGCCCCAAATATCCCGGGGGGCCC..GGGGGGCA.G.....C.G.....CCCCCCGCCACTTCCGCCACGGGGCCGCGCCCCCGCCGTTGACGAAg                                                                  >  2:1581271/1‑101 (MQ=21)


                            aaaCCCATCCCTTT.CATCTTGCCCCAAATATCCCGGGGGGCCC..GGGGGGCA.G.....C.G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAg                                                                  >  2:190887/1‑101 (MQ=25)


                             aaCCCATCCCTTT.CATCTTGCCCCAAATATCCCGGGGGGCCC..GGGGGGCA.G.....C.G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAgg                                                                 >  1:3136026/1‑101 (MQ=25)


                             aaCCCATCCCTTT.CATCTTGCCCCAAATATCCCGGGGGGCCC..GGGGGGCA.G.....C.G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAgg                                                                 >  2:4326659/1‑101 (MQ=25)


                              cccccccctttt.CTTCTT.CCCCAAAATCCCCGGGGGGCCC..GGGG.....GGGC..C.GCC...CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGga                                                                <  1:3067678/92‑1 (MQ=255)


                                ccATCCCTTT.CATCTTGCCCCAAATATCCCGGGGGGCCC..GGGGGGCA.G.....C.G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGgaga                                                              >  1:2833371/1‑101 (MQ=25)


                                  aTCCCTTT.CATCTTGCCCCAAATATCCCGGGGGGCCC..GGGGGGCA.G.....C.G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGAcc                                                            >  2:2914303/1‑101 (MQ=25)


                                  aTCCCTTT.CATCTTGCCCCAAATATCCCGGGGGGCCC..GGGGGGCA.G.....C.G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGAcc                                                            >  1:2122948/1‑101 (MQ=25)


                                   tCCCTTT.CATCTTGCCCCAAATATCCCGGGGGGCCC..GGGGGGCA.G.....C.G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACcg                                                           >  1:83676/1‑101 (MQ=21)


                                   tCCCTTT.CATCTTGCCCCAAATATCCCGGGGGGCCC..GGGGGGCA.G.....C.G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACcg                                                           >  1:3846642/1‑101 (MQ=25)


                                     ccTTT.CCTTTTGCCCCAAAATCCCCGGGGGGCCG..GGGG.....GGCCCCC.C.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACtgc                                                          <  2:1232427/101‑1 (MQ=255)


                                     ccTTT.CATCTTGCCCCAAATATCCCGGGGGGCCC..GGGGGGCA.G.....C.G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGCAGGAGACcgcg                                                         >  2:1603274/1‑101 (MQ=21)


                                     ccTTT.CATCTTGCCCCAAATATCCCGGGGGGCCC..GGGGGGCA.G.....C.G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACcgcg                                                         >  1:2002142/1‑101 (MQ=25)


                                     ccTTT.CATCTTGCCCCAAATATCCCGGGGGGCCC..GGGGGGCA.G.....C.G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACcgcg                                                         >  1:3621634/1‑101 (MQ=25)


                                     ccTTT.CACCGTCCCCCAAATTCCCCGGGGGGGCC..GGGG.....GGGCCCC.C.....CCCCCCGCCACTTCCGCCACGGGACAGCGCCCCGGCCGTTGACGAAGGAGACcgc                                                          <  2:1835342/101‑1 (MQ=255)


                                      cTTT.CATCTTGCCCCAAATATCCCGGGGGGCCC..GGGGGGCA.G.....C.G.....CCGCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGa                                                        >  2:4028967/1‑101 (MQ=25)


                                       ttt.CATCTTGCCCCAAATATCCCGGGGGGCCC..GGGGGGCA.G.....C.G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGAt                                                       >  1:444767/1‑101 (MQ=25)


                                         ttccccTTCCCCCAAATGCCCCGGGGGGCCC..GGGG.....GGC...C.GCCC..CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGAt                                                       <  2:3373699/96‑1 (MQ=255)


                                         t.CATCTTGCCCCAAATATCCCGGGGGGCCC..GGGGGGCA.G.....C.G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGt                                                     >  2:3346597/1‑101 (MQ=25)


                                         t.CATCTTGCCCCAAATATCCCGGGGGGCCC..GGGGGGCA.G.....C.G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGt                                                     >  2:3796993/1‑101 (MQ=25)


                                         t.CATCTTGCCCCAAATATCCCGGGGGGCCC..GGGGGGCA.G.....C.G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGt                                                     >  2:3558206/1‑101 (MQ=25)


                                         t.CATCTTGCCCCAAATATCCCGGGGGGCCC..GGGGGGCA.G.....C.G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGt                                                     >  1:3649654/1‑101 (MQ=25)


                                           cATCTTGCCCCAAATATCCCGGGGGGCCC..GGGGGGCA.G.....C.G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGtt                                                    >  1:3058043/1‑101 (MQ=25)


                                           cATCTTGCCCCAAATATCCCGGGGGGCCC..GGGGGGCA.G.....C.G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGtt                                                    >  2:4469830/1‑101 (MQ=25)


                                            aTCTTGCCCCAAATATCCCGGGGGGCCC..GGGGGGCA.G.....C.G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGttt                                                   >  1:1349631/1‑101 (MQ=25)


                                            aTCTTGCCCCAAATATCCCGGGGGGCCC..GGGGGGCA.G.....C.G.....CCCCCCCCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGttt                                                   >  1:1897689/1‑101 (MQ=25)


                                                tGCCCCAAATATCCCGGGGGGCCC..GGGGGGCA.G.....C.G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCaaa                                               >  1:1549628/1‑101 (MQ=25)


                                                  ccccAAATATCCCGGGGGGCCC..GGGGGGCA.G.....C.G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAg                                             >  1:2541920/1‑101 (MQ=25)


                                                      aaaTATCCCGGGGGGCCC..GGGGGGCA.G.....C.G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATcc                                         >  1:1182454/1‑101 (MQ=25)


                                                       aaTATCCCGGGGGGCCC..GGGGGGCA.G.....C.G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCt                                        >  2:2849596/1‑101 (MQ=25)


                                                        atatCCCGGGGGGCCC..GGGGGGCA.G.....C.G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTg                                       >  2:3511336/1‑101 (MQ=37)


                                                        atatCCCGGGGGGCCC..GGGGGGCA.G.....C.G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTg                                       >  2:645818/1‑101 (MQ=37)


                                                         tatCCCGGGGGGCCC..GGGGGGCA.G.....C.G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGa                                      >  1:3437014/1‑101 (MQ=37)


                                                          atCCCGGGGGGCCC..GGGGGGCA.G.....C.G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGAt                                     >  1:1884789/1‑101 (MQ=37)


                                                          atCCCGGGGGGCCC..GGGGGGCA.G.....C.G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGGTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGac                                     >  2:3661330/1‑100 (MQ=25)


                                                           tCCCGGGGGGCCC..GGGGGGCA.G.....C.G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGAGGAAGGAGACCGCGATGTTTCAAAAGATCCTGATc                                    >  1:4002554/1‑101 (MQ=37)


                                                              cGGGGGGCCC..GGGGGGCA.G.....C.G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTNAAAAGATCCTGATCGcc                                 >  2:892503/1‑101 (MQ=37)


                                                              cGGGGGGCCC..GGGGGGCA.G.....C.G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGcc                                 >  1:4382835/1‑101 (MQ=37)


                                                                          cggggggcag.....c.g.....cCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGcc                        >  2:938051/10‑101 (MQ=255)


                                                                          cggggggcag.....c.g.....cCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGcc                        >  1:2995333/10‑101 (MQ=255)


                                                                           ggggggcag.....c.g.....cCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCg                       >  1:733607/9‑101 (MQ=255)


                                                                           ggggggcag.....c.g.....cCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCg                       >  1:991799/9‑101 (MQ=255)


                                                                           ggggggcag.....c.g.....cCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCg                       >  2:112525/9‑101 (MQ=255)


                                                                           ggggggcag.....c.g.....cCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCg                       >  1:3827010/9‑101 (MQ=255)


                                                                           ggggggcag.....c.g.....cCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCg                       >  2:4586190/9‑101 (MQ=255)


                                                                           ggggggcag.....c.g.....cCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCg                       >  1:2907105/9‑101 (MQ=255)


                                                                           ggggggcag.....c.g.....cCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCg                       >  1:2394281/9‑101 (MQ=255)


                                                                              gggcag.....c.g.....cCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCgaga                    >  1:2811728/6‑101 (MQ=255)


                                                                                       ccactcccccccccccCCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCga                      <  1:1633668/91‑1 (MQ=255)


                                                                                        ggggcccccccccccGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCgag                     <  1:1775819/92‑1 (MQ=255)


                                                                                         c.g.....cCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCt              >  1:4665710/1‑101 (MQ=255)


                                                                                          ggccgccccccccGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGAt                   <  1:1973800/94‑1 (MQ=255)


                                                                                           ggccccccccccGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATc                  <  2:3564358/95‑1 (MQ=255)


                                                                                           g.....cCCCCCGCCACTTCCGCCACGGGGCATCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTg             >  1:1189194/1‑101 (MQ=255)


                                                                                           g.....cCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTg             >  2:3467977/1‑101 (MQ=255)


                                                                                            cccccccccccGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCg                 <  2:2541746/96‑1 (MQ=255)


                                                                                               ccccccccGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCt              <  2:2010852/99‑1 (MQ=255)


                                                                                                 ccccccGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTGt            <  2:1195592/101‑1 (MQ=255)


                                                                                                  cccccGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTGTc           >  2:27831/1‑101 (MQ=255)


                                                                                                  cccccGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTGTc           >  1:2717538/1‑101 (MQ=255)


                                                                                                   ccccGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTGTCg          <  1:112539/101‑1 (MQ=255)


                                                                                                    cccGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTGTCgg         >  2:251662/1‑101 (MQ=255)


                                                                                                      cGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTGTCGGGt       >  2:3300413/1‑101 (MQ=255)


                                                                                                      cGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTGTCGGGt       <  1:3409126/101‑1 (MQ=255)


                                                                                                       gCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTGTCGGGTg      >  2:1445035/1‑101 (MQ=255)


                                                                                                       gCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTGTCGGGTg      >  1:3911308/1‑101 (MQ=255)


                                                                                                       gCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTGTCGGGTg      <  1:3752880/101‑1 (MQ=255)


                                                                                                        ccACTCCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTGTCGGGTGa     <  2:13359/101‑1 (MQ=255)


                                                                                                         cACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTGTCGGGTGAt    >  2:3428443/1‑101 (MQ=255)


                                                                                                          aCTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTGTCGGGTGATc   >  1:3063462/1‑101 (MQ=255)


                                                                                                           cTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGAGCGCCTGTCGGGTGATCg  >  2:4192608/1‑101 (MQ=255)


TCCGGCGGGGATATTTGGGGC.AAGATGAAACCCATCCCTTT.CATCTTGCCCCAAATATCCCGGGGGGCCC..GGGG.....G.....C.G.....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTGTCGGGTGATCG  >  NC_014034/1639932‑1640119

Base quality scores:


ATCG

< 3 ≤


ATCG

< 20 ≤


ATCG

< 27 ≤


ATCG

< 33 ≤


ATCG

< 41 ≤


ATCG