BRESEQ :: Evidence

Read alignment evidence...
	seq id	position		change	freq	score	reads	annotation	genes	product
*	NC_014034	1,397,874	2	.→T	0.9%	0.7 0.0 ‑0.1	214	intergenic (+178/+1720)	RCAP_rcc01307/RCAP_rcc01309	hypothetical protein/IS66 family transposase
Rejected: E-value exceeds prediction threshold.
Reads supporting (aligned to +/- strand): new base (1/1): ref base (97/115): total (98/116)
Fisher's exact test strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 8.62e-01

Only 100 of 236 total aligned reads displayed.


CCCCGCGGGGGCGTGGATCGAAACGGTGTCCAGCGTCACATGCAGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAA.C.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATGGGAGGCTAGGGAGGCTACGCACCTTCAAAAGTCG  >  NC_014034/1397774‑1397974


ccccGCGGGGGCGTGGATCGAAACGGTGTCCAGCGTCACATGCAGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAA.C.CCGGCAc                                                                                                        >  1:3843573/1‑101 (MQ=255)


ccccGCGGGGGCGTGGAGCGAAACGGAGTGCAGCGACACATGTATCGGCGTCGCATCGCCATGTCGCTCCCCGCGTGGGGGCGTGGGTCGAAA.C.ATGGCAc                                                                                                        >  2:2025092/1‑101 (MQ=25)


 cccGCGGGGGCGTGGATCGAAACGGTGTCCAGCGTCACATGCAGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAA.C.CCGGCAc..c                                                                                                     <  2:4015324/101‑1 (MQ=255)


  ccGCGGGGGCGTGGATCGAAACGGTGTCCAGCGTCACATGCAGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAA.C.CCGGCAC..Ct                                                                                                    <  1:683535/101‑1 (MQ=255)


   gaggggggCG.GGATCGAAACGGTGTCCAGCGCCACATGCAGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAA.C.CCGGCAC..CTCa                                                                                                  <  1:1847669/98‑1 (MQ=255)


   cgcgGGGGCGTGGATCGAAACGGTGTCCAGCGTCACATGCAGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAA.C.CCGGCAC..CTc                                                                                                   <  1:1198376/101‑1 (MQ=255)


   cgcgGGGGCGTGGATCGAAACGGTGTCCAGCGTCACATGCAGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAA.C.CCGGCAC..CTc                                                                                                   <  2:1656742/101‑1 (MQ=255)


   cgcgGGGGCGTGGATCGAAACGGTGTCCAGCGTCACATGCAGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAA.C.CCGGCAC..CTc                                                                                                   <  2:4571718/101‑1 (MQ=255)


    gcgGGGGCGTGGATCGAAACGGTGTCCAGCGTCACATGCAGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAA.C.CCGGCAC..CTCa                                                                                                  >  1:1651246/1‑101 (MQ=255)


     cgGGGGCGTGGATCGAAACGGTGTCCAGCGTCACATGCAGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAA.C.CCGGCAC..CTCAg                                                                                                 >  1:209734/1‑101 (MQ=255)


      gggggCGTGGATCGAAACGGTGTCCAGCGTCACATGCAGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAA.C.CCGGCAC..CTCAGc                                                                                                >  2:2961146/1‑101 (MQ=255)


      gggggCGTGGATCGAAACGGTGTCCAGCGTCACATGCAGCGGCGTCGCATCGCCATGCCGCTCCCCCCGCGGGGGCGTGGATCGAAA.C.CCGGCAC..CTCAGc                                                                                                >  2:485030/1‑101 (MQ=255)


       ggggCGTGGATCGAAACGGTGTCCAGCGTCACATGCAGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAA.C.CCGGCAC..CTCAGcc                                                                                               <  2:410701/101‑1 (MQ=255)


         ggCGTGGATCGAAACGGTGTCCAGCGTCACATGCAGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAA.C.CCGGCAC..CTCAGcccc                                                                                             <  2:4493065/101‑1 (MQ=255)


          gagTGGATCGAAACGGTGTCCAGCGTCACATGCAGCGGCGTCGCATCGCCATGTCGCGCCCCCCGCGGGGGCGTGGATCGAAA.C.CCGGCAC..CTCAGCcccg                                                                                            <  2:2182148/99‑1 (MQ=255)


           cGTGGATCGAAACGGTGTCCAGCGTCACATGCAGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAA.C.CCGGCAC..CTCAGCcccgc                                                                                           >  1:772150/1‑101 (MQ=255)


            gTGGATCGAAACGGTGTCCAGCGTCACATGCAGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAA.C.CCGGCAC..CTCAGCcccgcc                                                                                          >  2:2835845/1‑101 (MQ=255)


                 tCGAAACGGTGTCCAGCGTCACATGCAGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAA.C.CCGGCAC..CTCAGCCCCGCCCGCTg                                                                                     >  2:2589450/1‑101 (MQ=255)


                   gAAACGGTGTCCAGCGTCACATGCAGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAA.C.CCGGCAC..CTCAGCCCCGCCCGCTGtc                                                                                   >  2:3839793/1‑101 (MQ=255)


                   gAAACGGTGTCCAGCGTCACATGCAGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAA.C.CCGGCAC..CTCAGCCCCGCCCGCTGtc                                                                                   >  1:143167/1‑101 (MQ=255)


                    aaaCGGTGTCCAGCGTCACATGCAGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAA.C.CCGGCAC..CTCAGCCCCGCCCGCTGtct                                                                                  >  2:2944336/1‑101 (MQ=255)


                      aCGGTGTCCAGCGTCACATGCAGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAA.C.CCGGCAC..CTCAGCCCCGCCCGCTGtctcc                                                                                >  2:1900609/1‑100 (MQ=255)


                        ggTGTCCAGCGTGACATGCAGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAA.C.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCAcc                                                                              >  1:2532475/1‑101 (MQ=255)


                        ggTGTCCAGCGTCACATGCAGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAA.C.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCAcc                                                                              <  1:514110/101‑1 (MQ=255)


                         gtgtCCAGCGTCACATGCAGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAA.C.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCa                                                                             <  2:191118/101‑1 (MQ=255)


                           gtCCAGCGTCACATGCAGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAA.C.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAAc                                                                           <  1:174478/101‑1 (MQ=255)


                            tCCAGCGTCACATGCAGCCGCGTCGCTTCGCCATGTCGCCCCCCCCGCGGGGGCGTGGATCTAAA.C.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACa                                                                          <  1:2357998/101‑1 (MQ=38)


                              cAGCGTCACATGCAGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAA.C.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGt                                                                        >  1:2296803/1‑101 (MQ=255)


                              cAGCGTCACATGCAGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAA.C.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGt                                                                        <  1:3098531/101‑1 (MQ=255)


                              cAGCGCCACATGCAGCGGCGCCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAA.C.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGt                                                                        <  2:4150632/101‑1 (MQ=255)


                                gCGTCACATGCAGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAA.C.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCg                                                                      <  2:2792113/101‑1 (MQ=255)


                                gCGTCACATGCAGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAA.C.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCg                                                                      >  1:2997647/1‑101 (MQ=255)


                                    cacaTGCAGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAA.C.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTcc                                                                  <  2:3173277/101‑1 (MQ=255)


                                     acaTGCAGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAA.C.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTccc                                                                 <  1:1056945/101‑1 (MQ=255)


                                       aTGCAGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAA.C.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTccccc                                                               <  2:2301919/101‑1 (MQ=255)


                                        tGCAGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAA.C.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTcccccc                                                              <  2:760495/101‑1 (MQ=255)


                                        tGCAGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAA.C.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTcccccc                                                              >  2:4472639/1‑101 (MQ=255)


                                        tGCAGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAA.C.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTcccccc                                                              <  1:4506552/101‑1 (MQ=255)


                                        tGCAGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAA.C.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTcccccc                                                              <  1:4411794/101‑1 (MQ=255)


                                         gCAGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAA.C.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCcg                                                             <  1:280883/101‑1 (MQ=255)


                                         gCAGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAA.C.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCcg                                                             <  2:1560677/101‑1 (MQ=255)


                                         gCAGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAA.C.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCcg                                                             <  2:1863348/101‑1 (MQ=255)


                                         gCAGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAA.C.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCcg                                                             <  1:3502049/101‑1 (MQ=255)


                                           aGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAA.C.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCcgcg                                                           >  2:4329540/1‑101 (MQ=255)


                                              ggcgTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAA.C.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCgggg                                                        >  1:1592604/1‑101 (MQ=255)


                                              ggcgTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAA.C.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCgggg                                                        >  1:3251769/1‑101 (MQ=255)


                                                cgTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAA.C.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGc                                                      <  1:2913575/101‑1 (MQ=255)


                                                   cGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAA.C.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTg                                                   <  1:2589635/101‑1 (MQ=255)


                                                    gCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAA.C.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTgg                                                  <  1:1134509/101‑1 (MQ=255)


                                                     cATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAA.C.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGa                                                 <  2:345847/101‑1 (MQ=255)


                                                       tccccATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAA.C.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATc                                               <  1:103095/98‑1 (MQ=255)


                                                       tCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAA.C.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATc                                               <  2:1731624/101‑1 (MQ=255)


                                                       tCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAA.C.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATc                                               <  1:3766457/101‑1 (MQ=255)


                                                       tCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAA.C.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATc                                               <  1:2864674/101‑1 (MQ=255)


                                                       tCGCCATGTCGCTCCCCCCGCGGGGGCGTCGATCAAAC.C.CCGGCAC..CTCAGCCCCCCCCCCTGTCGCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATc                                               <  2:3665611/101‑1 (MQ=25)


                                                        cGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAA.C.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCg                                              >  1:406733/1‑101 (MQ=255)


                                                          ccATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAA.C.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGACGCTCCCCCCCCGGGGGCGCGGATCGaa                                            >  1:574715/1‑101 (MQ=255)


                                                           ggcctCGCCCCCCCCGCGGGGGCGTGGATCGAAC.C.CCGCCACGTCTTGGAACAGCGTGCTAT.TGGCC.CCGGTCGCTCCCCCCGCGGGGGCGTGGATCGaaa                                           <  2:1082909/97‑1 (MQ=2)


                                                           cATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAA.C.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGaaa                                           >  2:357511/1‑101 (MQ=255)


                                                           cATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAA.C.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGaaa                                           >  2:4240863/1‑101 (MQ=255)


                                                             tGTCGCTCCCCCCGCGGGGGCGTGGATCGAAA.C.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAct                                         >  1:4115292/1‑101 (MQ=255)


                                                             tGTCGCTCCCCCCGCGGGGGCGTGGATCGAAA.C.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAct                                         <  1:2029159/101‑1 (MQ=255)


                                                             tGTCGCTCCCCCCGCGGGGGCGTGGATCGAAA.C.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAct                                         >  2:1922316/1‑101 (MQ=255)


                                                             tGTCGCTCCCCCCGCGGGGGCGTGGATCGAAA.C.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGGGGGTcagatcg                                         >  1:839660/1‑95 (MQ=37)


                                                              gTCGCTCCCCCCGCGGGGGCGTGGATCGAAG.C.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCCCCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAActc                                        <  2:3562664/101‑1 (MQ=255)


                                                              gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACC.CCAATGC..CGAAGCCAAGGCCGCAGCAGCGGCTGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAca                                         >  1:1947895/1‑100 (MQ=2)


                                                              gTCGCTCCCCCCGCGGGGGCGTGGATCGAAA.C.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGGTCGAAActc                                        >  1:859420/1‑101 (MQ=255)


                                                                cGCTCCCCCCGCGGGGGCGTGGATCGAAA.C.CCGGCAC..CTCAGCCCCGCCCGCTGTCCCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTa                                      <  1:4619721/101‑1 (MQ=255)


                                                                 gCTCCCCCCGCGGGGGCGTGGATCGAAA.C.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTAt                                     <  2:143153/101‑1 (MQ=255)


                                                                 gCTCCCCCCGCGGGGGCGTGGATCGAAA.C.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTAt                                     >  1:3054244/1‑101 (MQ=255)


                                                                   tCCCCCCGCGGGGGCGTGGATCGAAA.C.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATgg                                   >  1:2785321/1‑101 (MQ=255)


                                                                   tCCCCCCGCGGGGGCGTGGATCGAAA.C.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCCAGGATCGAAACTCTATgg                                   >  2:785560/1‑101 (MQ=255)


                                                                   tCCCCCCGCGGGGGCGTGGATCGAAA.C.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCACGGGGGCGCGGATCGACACTCCATgg                                   >  2:520637/1‑101 (MQ=38)


                                                                     cccccGCGGGGGCGTGGATCGAAA.CACCAATGC..CGAAGCCAAGGCCGCAGCAGCGTCTGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAcaaaaagcc                                  >  1:3924347/1‑93 (MQ=0)


                                                                     cccccGCGGGGGCGTGGATCGAAA.C.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATggga                                 <  2:678333/101‑1 (MQ=255)


                                                                      ccccGCGGGGGCGTGGATCGAAA.C.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATgggag                                <  1:4329832/101‑1 (MQ=255)


                                                                      ccccGCGGGGGCGTGGATCGAAA.C.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATgggag                                <  1:3793499/101‑1 (MQ=255)


                                                                      ccccGCGGGGGCGTGGATCGAAA.C.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATgggag                                <  2:4441557/101‑1 (MQ=255)


                                                                          gcgGGGGCGTGGATCGAAA.C.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATgggaggcta                            >  2:4114109/1‑101 (MQ=255)


                                                                           cgGGGGCGTGGATCGAAA.C.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATgggaggctag                           >  2:623629/1‑101 (MQ=255)


                                                                            gggggCGTGGATCGAAA.C.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATgggaggctagg                          >  2:3688212/1‑101 (MQ=255)


                                                                              gggCGTGGATCGAAA.C.CCGGCAC..CTCAGCCCCGCCCGCTGTCTTACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATgggaggctaggga                        >  1:3983640/1‑101 (MQ=255)


                                                                                gCGTGGATCGAAA.C.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATgggaggctagggagg                      <  1:3633921/101‑1 (MQ=255)


                                                                                 cGTGGATCGAAA.C.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATgggaggctagggaggc                     <  1:2944565/101‑1 (MQ=255)


                                                                                 cGTGGATCGAAA.C.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATgggaggctagggaggc                     >  1:4278602/1‑101 (MQ=255)


                                                                                  gTGGATCGAAA.C.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAATTCTATggggggctagggaggct                    >  2:2530998/1‑101 (MQ=255)


                                                                                  gTGGATCGAAA.C.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATgggaggctagggaggct                    <  2:3990572/101‑1 (MQ=255)


                                                                                   tGGATCGAAA.C.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATgggaggctagggaggcta                   <  1:47978/101‑1 (MQ=255)


                                                                                   tGGATCGAAA.C.CCGGCAC..CCCAGCCCCGCCCGCTCTCTCACCAACAGCCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATgggaggctagggaggcta                   <  2:859344/101‑1 (MQ=255)


                                                                                    ggATCGAAA.C.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATGGGAGGCTAGGGAGGCTAc                  >  2:3045109/1‑101 (MQ=255)


                                                                                     gATCGAAA.C.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATGGGAGGCTAGGGAGGCTACg                 <  1:3964668/101‑1 (MQ=255)


                                                                                        cGAAA.C.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATGGGAGGCTAGGGAGGCTACGCAc              >  2:1295068/1‑101 (MQ=255)


                                                                                          aaa.C.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATGGGAGGCTAGGGAGGCTACGCACCt            >  1:2458179/1‑101 (MQ=255)


                                                                                            a.C.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATGGGAGGCTAGGGAGGCTACGCACCTTc          <  1:1905722/101‑1 (MQ=255)


                                                                                            a.C.CCGGCAC..CTCAGCCCCGCCCGCTGTATCACCAACAGCCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATGGGAGGCTAGGGAGGCTACGCACCtcc          <  2:4081661/101‑3 (MQ=255)


                                                                                                 cGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATGGGAGGCTAGGGAGGCTACGCACCTTCaaa       <  1:4475096/101‑1 (MQ=255)


                                                                                                   gCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATGGGAGGCTAGGGAGGCTACGCACCTTCAAAAg     >  1:1536681/1‑101 (MQ=255)


                                                                                                   gCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATGGGAGGCTAGGGAGGCTACGCACCTTCAAAAg     <  2:228437/101‑1 (MQ=255)


                                                                                                    cAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATGGGAGGCTAGGGAGGCTACGCACCTTCAAAAGt    >  1:2221695/1‑101 (MQ=255)


                                                                                                    cAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATGGGAGGCTAGGGAGGCTACGCACCTTCAAAAGt    <  2:1547175/101‑1 (MQ=255)


CCCCGCGGGGGCGTGGATCGAAACGGTGTCCAGCGTCACATGCAGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAA.C.CCGGCAC..CTCAGCCCCGCCCGCTGTCTCACCAACAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCTATGGGAGGCTAGGGAGGCTACGCACCTTCAAAAGTCG  >  NC_014034/1397774‑1397974

Base quality scores:


ATCG

< 3 ≤


ATCG

< 18 ≤


ATCG

< 26 ≤


ATCG

< 33 ≤


ATCG

< 40 ≤


ATCG