BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_014034	1,696,166	A→C	100%	intergenic (‑94/+131)	RCAP_rcc01564 ← / ← mmsA	isobutyryl‑CoA dehydrogenase/methylmalonate‑semialdehyde dehydrogenase

Read alignment evidence...
	seq id	position		change	freq	score	reads	annotation	genes	product
*	NC_014034	1,696,166	0	A→C	100.0%	749.0	222	intergenic (‑94/+131)	RCAP_rcc01564/mmsA	isobutyryl‑CoA dehydrogenase/methylmalonate‑semialdehyde dehydrogenase
Reads supporting (aligned to +/- strand): new base (103/119): ref base (0/0): total (103/119)

Only 100 of 227 total aligned reads displayed.


AATCCATGCGCTCCTCCCAAAGTGCCTGAATTGAACGTCTGTTTAATTTCGAATCCTTGCACGAATTTTGCAAGGAGGGGAGAAGGGCAGCTTGCCCCTCATGGCCTTT.CG.G.CAATTCCACCCGGGAAGGTTGGGCCAAAGGGTGAAACCACCCTGGCTTTTTCTTGGCGCAAATACGCCTCTGGCCCGAAGGGCAAGCC  >  NC_014034/1696066‑1696265


aaTCCATGCGCTCCTCCCAAAGTGCCTGAATTGTTCGTCTGTTTAATTTCGAATCCTTGCACGAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTg                                                                                                      <  1:4003900/101‑1 (MQ=255)


   ccATGCGCTCCTCCCAAAGTGCCTGAATTGAACGTCTGTTTAATTTCGAATCCTTGCACGAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGcc                                                                                                   >  1:4084552/1‑101 (MQ=255)


   ccATGCGCTCCTCCCAAAGTGCCTGAATTGAACGTCTGTTTAATTTCGAATCCTTGCACGAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGcc                                                                                                   >  2:2774892/1‑101 (MQ=255)


       gcgcTCCTCCCAAAGTGCCTGAATTGAACGTCTGTTTAATTTCGAATCCTTGCACGAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTT.c                                                                                              <  1:1632309/101‑1 (MQ=255)


       gcgcTCCTCCCAAAGTGCCTGAATTGAACGTCTGTTTAATTTCGAATCCTTGCACGAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTT.c                                                                                              <  1:1478572/101‑1 (MQ=255)


       ctgcTCCTCCCAAAGTGCCTGAATTGAACGTCTGTTTAATTTCGAATCCTTGCACGAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTT.c                                                                                              <  1:1291660/99‑1 (MQ=255)


        cgcTCCTCCCAAAGTGCCTGAATTGAACGTCTGTTTAATTTCGAATCCTTGCACGAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTT.Cg                                                                                             <  1:2629221/101‑1 (MQ=255)


        cgcTCCTCCCAAAGTGCCTGAATTGAACGTCTGTTTAATTTCGAATCCTTGCACGAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTT.Cg                                                                                             <  2:230411/101‑1 (MQ=255)


          ctcctcCCAAAGTGCCTGAATTGAACGTCTGTTTAATTTCGAATCCTTGCACGAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTT.CG.G.c                                                                                         >  1:2212669/1‑101 (MQ=255)


           tcctccCAAAGTGCCTGAATTGAACGTCTGTTTAATTTCGAATCCTTGCACGAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTT.CG.G.cc                                                                                        >  2:698925/1‑100 (MQ=255)


            cctccCAAAGTGCCTGAATTGAACGTCTGTTTAATTTCGAATCCTTGCACGAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTT.CG.G.cca                                                                                       >  2:2861805/1‑99 (MQ=255)


             ctccCAAAGTGCCTGAATTGAACGTCTGTTTAATTTCGAATCCTTGCACGAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTT.CG.G.ccaa                                                                                      <  2:930712/101‑4 (MQ=255)


              tccCAAAGTGCCTGAATTGAACGTCTGTTTAATTTCGAATCCTTGCACGAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTT.CG.G.ccaat                                                                                     <  1:4293642/101‑5 (MQ=255)


               cccAAAGTGCCTGAATTGAACGTCTGTTTAATTTCGAATCCTTGCACGAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTT.CG.G.ccaatt                                                                                    <  2:2236730/101‑6 (MQ=255)


               cccAAAGTGCCTGAATTGAACGTCTGTTTAATTTCGAATCCTTGCACGAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTT.CG.G.ccaatt                                                                                    >  2:1478577/1‑96 (MQ=255)


               cccAAAGTGCCTGAATTGAACGTCTGTTTAATTTCGAATCCTTGCACGAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTT.CG.G.ccaatt                                                                                    >  1:891705/1‑96 (MQ=255)


                ccAAAGTGCCTGAATTGAACGTCTGTTTAATTTCGAATCCTTGCACGAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTT.CG.GCCAATTc                                                                                    <  2:456427/101‑1 (MQ=255)


                ccAAAGTGCCTGAATTGAACGTCTGTTTAATTTCGAATCCTTGCACGAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTT.CG.GCCAATTc                                                                                    <  1:1674959/101‑1 (MQ=255)


                ccAAAGTGCCTGAATTGAACGTCTGTTTAATTTCGAATCCTTGCACGAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTT.CG.GCCAATTc                                                                                    <  1:999257/101‑1 (MQ=255)


                ccAAAGTGCCTGAATTGAACGTCTGTTTAATTTCGAATCCTTGCACGAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTT.CG.GCCAATTc                                                                                    >  1:552563/1‑101 (MQ=255)


                   aaGTGCCTGAATTGAACGTCTGTTTAATTTCGAATCCTTGCACGAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTT.CG.G.CCAATTCAcc                                                                                <  1:2882430/101‑1 (MQ=255)


                    aGTGCCTGAATTGAACGTCTGTTTAATTTCGAATCCTTGCACGAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTT.CG.G.CCAATTCAccc                                                                               >  2:1114933/1‑101 (MQ=255)


                    aGTGCCTGAATTGAACGTCTGTTTAATTTCGAATCCTTGCACGAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTT.CG.G.CCAATTCAccc                                                                               >  2:715691/1‑101 (MQ=255)


                      tGCCTGAATTGAACGTCTGTTTAATTTCGAATCCTTGCACGAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTT.CG.G.CCAATTCAccccg                                                                             <  2:3007042/101‑3 (MQ=255)


                        ccTGAATTGAACGTCTGTTTAATTTCGAATCCTTGCACGAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTT.CG.GCCAATTCACCCCggg                                                                            <  1:1048704/101‑1 (MQ=37)


                          tGAATTGAACGTCTGTTTAATTTCGAATCCTTGCACGAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTT.CG.GCCAATTCACCCCGGGat                                                                          <  2:903628/101‑2 (MQ=255)


                          tGAATTGAACGTCTGTTTAATTTCGAATCCTTGCACGAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTT.CG.GCCAATTCACCCCGGGat                                                                          <  1:452105/101‑2 (MQ=255)


                           gAATTGAACGTCTGTTTAATTTCGAATCCTTGCACGAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTT.CG.GCCAATTCACCCCGGGatg                                                                         <  1:1264316/101‑3 (MQ=25)


                             aTTGAACGTCTGTTTAATTTCGAATCCTTGCACGAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTT.CGAC.CAATTCACCCCGGGatgtt                                                                       <  1:2015028/101‑5 (MQ=255)


                             aTTGAACGTCTGTTTAATTTCGAATCCTTGCACGAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTT.CG.GCCAATTCACCCCGGGatgtt                                                                       <  2:1758377/101‑5 (MQ=255)


                             aTTGAACGTCTGTTTAATTTCGAATCCTTGCACGAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTT.CG.GCCAATTCACCCCGGGatgtt                                                                       >  1:2166922/1‑97 (MQ=25)


                              ttGAACGTCTGTTTAATTTCGAATCCTTGCACGAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTT.CG.GCCAATTCACCCCGGGatgttt                                                                      >  2:3155013/1‑96 (MQ=255)


                               tGAACGTCTGTTTAATTTCGAATCCTTGCACGAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTT.CG.GCCAATTCACCCCGGGATGTTTg                                                                     <  2:1210245/101‑1 (MQ=255)


                               tGAACGTCTGTTTAATTTCGAATCCTTGCACGAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTT.CG.GCCAATTCACCCCGGGATGTTTg                                                                     >  1:2052590/1‑101 (MQ=255)


                               tGAACGTCTGTTTAATTTCGAATCCTTGCACGAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTT.CG.GCCAATTCACCCCGGGATGTTTg                                                                     >  2:4194845/1‑101 (MQ=255)


                                gAACGTCTGTTTAATTTCGAATCCTTGCACGAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTTCCG.C.CAATTCACCCCGGGacgtttcg                                                                    >  1:1089246/1‑94 (MQ=255)


                                gAACGTCTGTTTAATTTCGAATCCTTGCACGAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTT.CG.GCCAATTCACCCCGGGATGTTTgg                                                                    >  2:4292770/1‑101 (MQ=25)


                                  aCGTCTGTTTAATTTCGAATCCTTGCACGAATCTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCCCCCCGCCTTT.CG.GCCCATTCCCCCCCGGGTGGTTGGGc                                                                  >  1:135955/1‑101 (MQ=255)


                                   cGTCTGTTTAATTTCGAATCCTTGCACGAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTT.CG.GCCAATTCACCCCGGGATGTTTGGGcc                                                                 >  2:379954/1‑101 (MQ=25)


                                   cGTCTGTTTAATTTCGAATCCTTGCACGAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTT.CG.GCCAATTCACCCCGGGATGTTTGGGcc                                                                 <  1:715766/101‑1 (MQ=255)


                                     tCTGTTTAATTTCGAATCCTTGCACGAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTT.CG.GCCAATTCACCCCGGGGTGTTTGGGCCaa                                                               >  1:673619/1‑101 (MQ=255)


                                     tCTGTTTAATTTCGAATCCTTGCACGAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTT.CG.GCCAATTCACCCCGGGATGTTTGGGCCaa                                                               <  2:251361/101‑1 (MQ=255)


                                      cTGTTTAATTTCGAATCCTTGCACGAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTT.CG.GCCAATTCACCCCGGGATGTTTGGGCCaag                                                              >  1:1508755/1‑100 (MQ=21)


                                      cTGTTTAATTTCGAATCCTTGCACGAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTT.CG.GCCAATTCACCCCGGGATGTTTGGGCCaag                                                              <  2:397613/101‑2 (MQ=255)


                                       tGTTTACTTTCGAATCCTTGCACGAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTT.CG.GCCAATTCACCCCGGGATGTTTGGGCCaagg                                                             <  1:768081/101‑3 (MQ=16)


                                       tGTTTAATTTCGAATCCTTGCACGAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTT.CG.GCCAATTCACCCCGGGATGTTTGGGCCaagg                                                             >  1:2314313/1‑99 (MQ=255)


                                       tGTTTAATTTCGAATCCTTGCACGAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTT.CG.GCCAATTCACCCCGGGATGTTTGGGCCaagg                                                             >  2:1367126/1‑99 (MQ=255)


                                        gTTTAATTTCGAATCCTTGCACGAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTT.CG.GCCAATTCACCCCGGGATGTTTGGGCCaaggt                                                            >  1:176595/1‑98 (MQ=255)


                                        gTTTAATTTCGAATCCTTGCACGAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTT.CG.GCCAATTCACCCCGGGATGTTTGGGCCaaggt                                                            <  2:3871213/101‑4 (MQ=255)


                                        gTTTAATTTCGAATCCTTGCACGAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTT.CG.GCCAATTCACCCCGGGATGTTTGGGCCaaggt                                                            >  1:1884558/1‑98 (MQ=255)


                                         tttAATTTCGAATCCTTGCACGAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTT.CG.GCCAATTCACCCCGGGATGTTTGGGCCaaggtg                                                           <  2:1868248/101‑5 (MQ=255)


                                            aaTTTCGAATCCTTGCACGAATTTTGCAAGGAGGGGAG.AGGGTCGC.TGCCCCTCCTGGCCTTT.CG.GCCAATTCACCCCGGGATGTTTGGGCCaaggtgaaa                                                        <  2:4384062/101‑8 (MQ=255)


                                             aTTTCGAATCCTTGCACGAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTT.CG.GCCAATTCACCCCGGGATGTTTGGGCCAAGgggaaac                                                       >  1:336489/1‑97 (MQ=255)


                                             aTTTCGAATCCTTGCACGAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTT.CG.GCCAATTCACCCCGGGATGTTTGGGCCAA..GGTGAAac                                                     >  1:1397737/1‑101 (MQ=255)


                                               ttCGAATCCTTGCACGAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTT.CG.GCCAATTCACCCCGGGATGTTTGGGCCAA..GGTGAAacac                                                   >  1:4219327/1‑99 (MQ=12)


                                                tCGAATCCTTGCACGAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTT.CG.GCCAATTCACCCCGGGATGTTTGGGCCAA..GGTGAAacacc                                                  >  1:1724768/1‑98 (MQ=255)


                                                tCGAATCCTTGCACGAATTTTACAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTT.CG.GCCAATTCACCCCGGGATGTTTGGGCCAA..GGTGAAacacc                                                  >  1:3439253/1‑98 (MQ=255)


                                                  gAATCCTTGCACGAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTT.CG.GCCAATTCACCCCGGGATGTTTGGGCCAA..GGTGAAacacctt                                                <  1:1115022/101‑6 (MQ=255)


                                                   aaTCCTTGCACGAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTT.CG.GCCAATTCACCCCGGGATGTTTGGGCCAA..GGTGAAacaccttg                                               >  1:3626574/1‑95 (MQ=255)


                                                     tCCTTGCACGAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTT.CG.GCCAATTCACCCCGGGATGTTTGGGCCAA..GGTGAAacaccttgct                                             <  2:2846411/101‑9 (MQ=255)


                                                      ccTTGCACGAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTT.CG.GCCAATTCACCCCGGGATGTTTGGGCCAA..GGTGAAacaccttgctt                                            <  1:939666/101‑10 (MQ=9)


                                                       cTTGCACGAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTT.CG.GCCAATTCACCCCGGGATGTTTGGGCCAA..GGTGAAacaccttgcttt                                           <  1:3125239/101‑11 (MQ=255)


                                                          gCACGAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTT.CG.GCCAATTCACCCCGGGATGTTTGGGCCAA..GGTGAAA.CA.CCTTGCTTTTTc                                      >  2:3648841/1‑101 (MQ=255)


                                                           cACGAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTT.CG.GCCAATTCACCCCGGGATGTTTGGGCCAA..GGTGAAA.CA.CCTTGCTTTTTCt                                     <  1:1346254/101‑1 (MQ=255)


                                                           cACGAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTT.CG.GCCAATTCACCCCGGGATGTTTGGGCCAA..GGTGAAA.CA.CCTTGCTTTTTCt                                     >  1:2849499/1‑101 (MQ=9)


                                                            aCGAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTT.CG.GCCCATTGACCCCGGGATGTTTGGGCCAA..GGTGAAA.TACCCT.GCTTTTTCtt                                    >  2:393602/1‑101 (MQ=255)


                                                            aCGAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTT.CG.GCCAATTCACCCCGGGATGTTTGGGCCAA..GGTGAAA.CA.CCTTGCTTTTTCtt                                    >  1:516253/1‑101 (MQ=255)


                                                             cGAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTT.CG.GCCAATTCACCCCGGGATGTTTGGGCCAA..GGTGAAA.CA.CCTTGCTTTTTCTTg                                   <  1:4065673/101‑1 (MQ=255)


                                                              gAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTT.CG.GCCAATTCACCCCGGGATGTTTGGGCCAA..GGTGAAA.CA.CCTTGCTTTTTCTTgg                                  <  1:2983853/101‑1 (MQ=255)


                                                              gAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTT.CG.GCCAATTCACCCCGGGATGTTTGGGCCAA..GGTGAAA.CA.CCTTGCTTTTTCTTgg                                  <  1:3191089/101‑1 (MQ=255)


                                                              gAATTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTT.CG.GCCAATTCACCCCGGGATGTTTGGGCC.AAGGG.GAAA.CA.CCTTGCTTTTTCTTgg                                  >  2:3910996/1‑101 (MQ=9)


                                                               aaTTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTT.CGAC.CAATTCACCCCGGGATGTTTGGGCCAA..GGTGAAA.CA.CCTTGCTTTTTCTTGgc                                 <  2:1667877/101‑1 (MQ=255)


                                                               aaTTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTT.CG.GCCAATTCACCCCGGGATGTTTGGGCCAA..GGTGAAA.CA.CCTTGCTTTTTCTTGgc                                 <  1:2491666/101‑1 (MQ=9)


                                                               aaTTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTT.CG.GCCAATTCACCCCGGGATGTTTGGGCCAA..GGTGAAA.CA.CCTTGCTTTTTCTTGgc                                 >  1:3861251/1‑101 (MQ=255)


                                                                aTTTTGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTT.CG.GCCAATTCACCCCGGGATGTTTGGGCCAA..GGTGAAA.CA.CCTTGCTTTTTCTTGgcg                                <  1:951987/101‑1 (MQ=255)


                                                                aTTTTGCAAGGAGGGGAG.AGGGGAGC.TGCCCCTCCTGGCCTTT.CG.GCCAATTCACCCCGGGATGTTTGGGCCCA..GGTGAAA.CA.CCTTGCTTTTTCTTGgcg                                >  2:1797521/1‑101 (MQ=255)


                                                                 ttttGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTT.CG.GCCAATTCACCCCGGGATGTTTAGGCCAA..GGTGAAA.CA.CCTTGCTTTTTCTTGgcgc                               >  2:3575452/1‑101 (MQ=9)


                                                                  tttGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTT.CG.GCCAATTCACCCCGGGATGTTTGGGCC.AAGGG.GAAA..AACCTTGCTTTTTCTTGGCGCa                              >  1:3720776/1‑101 (MQ=255)


                                                                  tttGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCCTT.CG.GCCAATTCACCCCGGGATGTTTGGGCCAA..GGTGAAA.CA.CCTTGCTTTTTCTTGGCGCa                              >  2:870626/1‑101 (MQ=255)


                                                                    tGCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTT.CG.GCCAATTCACCCCGGGATGTTTGGGCCAA..NGNNNAA.CA.CCTTGNTTTTTCTTGGGGCaaa                            >  1:4905/1‑101 (MQ=2)


                                                                     gCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTT.CG.GCCAATTCACCCCGGGATGTTTGGGCCAA..GGTGAAA.CA.CCTTGCTTTTTCTTGGCGCaaaa                           >  2:3339231/1‑100 (MQ=255)


                                                                     gCAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTT.CG.GCCAATTCACCCCGGGATGTTTGGGCCAA..GGTGAAA.CA.CCTTGCTTTTTCTTGGCGCAAAt                           <  1:3789785/101‑1 (MQ=9)


                                                                      cAAGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTT.CG.GCCAATTCACCCCGGGATGTTTGGGCCAA..GGTGAAA.CA.CCTTGCTTTTTCTTGGCGCAAATa                          <  1:1547415/101‑1 (MQ=255)


                                                                       aaGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTT.CG.GCCAATTCACCCCGGGATGTTTGGGCCAA..GGTGAAA.CA.CCTTGCTTTTTCTTGGCGCAAATAc                         <  2:2614232/101‑1 (MQ=255)


                                                                       aaGGAGGGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTT.CG.GCCAATTCACCCCGGGATGTTTGGGCCAA..GGTGAAA.CA.CCTTGCTTTTTCTTGGCGCAAATAc                         <  2:2166772/101‑1 (MQ=255)


                                                                          gaggGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTT.CG.GCCAATTCACCCCGGGATGTTTGGGCCAA..GGTGAAA.CA.CCTTGCTTTTTCTTGGCGCAAATACGcc                      >  1:4162492/1‑101 (MQ=9)


                                                                           aggGGAGAGGGGC.GC.TGCCCCTCCTGGCCTTT.CG.GCCAATTCACCCCGGGATGTTTGGGCCAA..GGTGAAA.CA.CCTTGCTTTTTCTTGGCGCAAATACGCct                     <  1:4253429/101‑1 (MQ=9)


                                                                            ggggAGAGGGGC.GC.TGCCCCTCCTGGCCTTT.CG.GCCAATTCACCCCGGGATGTTTGGGCCAA..GGTGAAA.CA.CCTTGCTTTTTCTTGGCGCAAATACGCctc                    >  1:2678334/1‑101 (MQ=12)


                                                                             gggAGAGGGGC.GC.TGCCCCTCCTGGCCTTT.CG.GCCAATTCACCCCGGGATGTTTGGGCCAA..GGTGAAA.CA.CCTTGCTTTTTCTTGGCGCAAATACGCctct                   <  2:4413375/101‑1 (MQ=255)


                                                                                   gaggggcgctGCCCCTCCTGGCCTTT.CG.GCCAATTCACCCCGGGATGTTTGGGCCAA..GGTGAAA.CA.CCTTGCTTTTTCTTGGCGCAAATACGCCTCTGGcc               <  2:551620/92‑1 (MQ=9)


                                                                                   gaggggcgctGCCCCTCCTGGCCTTT.CG.GCCAATTCACCCCGGGATGTTTGGGCCAA..GGTGAAA.CA.CCTTGCTTTTTCTTGGCGCAAATACGCCTCTGGcc               <  1:972764/92‑1 (MQ=12)


                                                                                    aggggcgctGCCCCTCCTGGCCTTT.CG.GCCAATTCACCCCGGGATGTTTGGGCCAA..GGTGAAA.CA.CCTTGCTTTTTCTTGGCGCAAATACGCCTCTGGccc              <  2:1397642/93‑1 (MQ=255)


                                                                                        gcgctGCCCCTCCTGGCCTTT.CG.GCCAATTCACCCCGGGATGTTTGGGCCAA..GGTGAAA.CA.CCTTGCTTTTTCTTGGCGCAAATACGCCTCTGGCCCGAAg          <  1:109706/97‑1 (MQ=255)


                                                                                        gcgctGCCCCTCCTGGCCTTT.CG.GCCAATTCACCCCGGGATGTTTGGGCCAA..GGTGAAA.CA.CCTTGCTTTTTCTTGGCGCAAATACGCCTCTGGCCCGAAg          <  1:2745883/97‑1 (MQ=255)


                                                                                          gctGCCCCTCCTGGCCTTT.CG.GCCAATTCACCCCGGGATGTTTGGGCCAA..GGTGAAA.CA.CCTTGCTTTTTCTTGGCGCAAATACGCCTCTGGCCCGAAggg        >  2:306874/3‑101 (MQ=16)


                                                                                            tGCCCCTCCTGGCCTTT.CG.GCCAATTCACCCCGGGATGTTTGGGCCAA..GGTGAAA.CA.CCTTGCTTTTTCTTGGCGCAAATACGCCTCTGGCCCGAAGGGCa      >  2:4050151/1‑101 (MQ=19)


                                                                                              ccccTCCTGGCCTTT.CG.GCCAATTCACCCCGGGATGTTTGGGCCAA..GGTGAAA.CA.CCTTGCTTTTTCTTGGCGCAAATACGCCTCTGGCCCGAAGGGCAAg    >  1:2346823/1‑101 (MQ=16)


                                                                                              ccccTCCTGGCCTTT.CG.GCCAATTCACCCCGGGATGTTTGGGCCAA..GGTGAAA.CA.CCTTGCTTTTTCTTGGCGCAAATACGCCTCTGGCCCGAAGGGCAAg    >  2:3703069/1‑101 (MQ=19)


                                                                                               cccTCCTGGCCTTT.CG.GCCAATTCACCCCGGGATGTTTGGGCCAA..GGTGAAA.CA.CCTTGCTTTTTCTTGGCGCAAATACGCCTCTGGCCCGAAGGGCAAGc   <  2:3694153/101‑1 (MQ=16)


                                                                                                ccTCCTGGCCTTT.CG.GCCAATTCACCCCGGGATGTTTGGGCCAA..GGTGAAA.CA.CCTTGTTTTTTCTTGGCGCAAATACGCCTCTGGCCCGAAGGGCAAGcc  <  2:4433117/101‑1 (MQ=16)


AATCCATGCGCTCCTCCCAAAGTGCCTGAATTGAACGTCTGTTTAATTTCGAATCCTTGCACGAATTTTGCAAGGAGGGGAGAAGGGCAGCTTGCCCCTCATGGCCTTT.CG.G.CAATTCCACCCGGGAAGGTTGGGCCAAAGGGTGAAACCACCCTGGCTTTTTCTTGGCGCAAATACGCCTCTGGCCCGAAGGGCAAGCC  >  NC_014034/1696066‑1696265

Base quality scores:


ATCG

< 3 ≤


ATCG

< 21 ≤


ATCG

< 29 ≤


ATCG

< 34 ≤


ATCG

< 41 ≤


ATCG