Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_014034 2,953,319 A→C 2.8% intergenic (+208/+170) RCAP_rcc02764 → / ← ilvE1 hypothetical protein/branched‑chain‑amino‑acid transaminase

Read alignment evidence...
  seq id position change freq score reads annotation genes product
*NC_0140342,953,3190A→C 2.8% 4.4 ‑3.1 ‑0.0184intergenic (+208/+170)RCAP_rcc02764/ilvE1hypothetical protein/branched‑chain‑amino‑acid transaminase
Reads supporting (aligned to +/- strand):  new base (6/0):  ref base (102/76):  total (108/76)
Fisher's exact test strand distribution p-value = 4.30e-02
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 9.03e-01

Only 100 of 217 total aligned reads displayed.

CCGCCTTGGTCTTTTCGGGGGCGCATTCTCTGAAAGCGCCTGACTTGGCCGCGGCCGGTGACGCGGCCATGCGAGACATCTGCAGTCACCACCGCCGGGGACCAAAGTCCCCGGCCAGCGCCCGCCCCGCCCATAGCGGGCGCTTCTCGCCCGCCGGGGCAGGCGCCGGCCTCTGTTGCGCGCGGGGCAGACGGTCTTGGC  >  NC_014034/2953219‑2953419
                                                                                                    |                                                                                                    
 cGCCTTGGTCTTTTCGGGGGCGCATTCTCTGAAAGCGCCTGACTTGGCCGCGGCCGGTGACGCGGCCATGCGAGACATCTGCAGTCACCACCGCCGGGGAc                                                                                                     >  1:4230499/1‑101 (MQ=255)
  gCCTTGGTCTTTTCGGGGGCGCATTCTCTGAAAGCGCCTGACTTGGCCGCGGCCGGTGACGCGGCCATGCGAGACATCTGCAGTCACCACCGCCGGGGAcc                                                                                                    <  1:1627490/101‑1 (MQ=255)
     ttGGTCTTTTCGGGGGCGCATTCTCTGAAAGCGCCTGACTTGGCCGCGGCCGGTGACGCGGCCATGCGAGACATCTGCAGTCACCACCGCCGGGGACCaaa                                                                                                 >  1:278019/1‑101 (MQ=255)
     ttGGTCTTTTCGGGGGCGCATTCTCTGAAAGCGCCTGACTTGGCCGCGGCCGGTGACGCGGCCATGCGAGACATCTGCAGTCACCAACGCCGGGGACCaaa                                                                                                 <  1:927482/101‑1 (MQ=255)
      tGGTCTTTTCGGGGGCGCATTCTCTGAAAGCGCCTGACTTGGCCGCGGCCGGTGACGCGGCCATGCGAGACATCTGCAGTCACCACCGCCGGGGACCAAAg                                                                                                <  1:1693358/101‑1 (MQ=255)
       ggTCTTTTCGGGGGCGCATTCTCTGAAAGCGCCTGACTTGGCCGCGGCCGGTGACGCGGCCATGCGAGACATCTGCAGTCACCACCGCCGGGGACCAAAGt                                                                                               >  1:3290109/1‑101 (MQ=255)
       ggTCTTTTCGGGGGCGCATTCTCTGAAAGCGCCTGACTTGGCCGCGGCCGGTGACGCGGCCATGCGAGACATCTGCAGTCACCACCGCCGGGGACCAAAGt                                                                                               >  1:668039/1‑101 (MQ=255)
        gTCTTTTCGGGGGCGCATTCTCTGAAAGCGCCTGACTTGGCCGCGGCCGGTGACGCGGCCATGCGAGACATCTGCAGTCACCACCGCCGGGGACCAAAGTc                                                                                              >  1:801599/1‑101 (MQ=255)
        gTCTTTTCGGGGGCGCATTCTCTGAAAGCGCCTGACTTGGCCGCGGCCGGTGACGCGGCCATGCGAGACATCTGCAGTCACCACCGCCGGGGACCAAAGTc                                                                                              <  2:4369232/101‑1 (MQ=255)
           ttttCGGTGGCGCATTCTCTGAAAGCGCCTGACTTGGCCGCGGCCGGCGACGCGGCGATGCGAGACGTCTGCAGTCACCACCGNCGGGGACCAACGtaggc                                                                                           >  2:1411821/1‑97 (MQ=255)
            tttCGGGGGCGCATTCTCTGAAAGCGCCTGACTTGGCCGCGGCCGGTGACGCGGCCATGCGAGACATCTGCAGTCACCACCGCCGGGGACCAAAGTCCCCg                                                                                          <  1:2416757/101‑1 (MQ=255)
               cGGGGGCGCATTCTCTGAAAGCGCCTGACTTGGCCGCGGCCGGTGACGCGGCCATGCGAGACATCTGCAGTCACCACCGCCGGGGACCAAAGTCCCCGGcc                                                                                       <  1:3214561/101‑1 (MQ=255)
                gggggCGCATTCTCTGAAAGCGCCTGACTTGGCCGCGGCCGGTGACGCGGCCATGCGAGACATCTGCAGTCACCACCGCCGGGGACCAAAGTCCCCGGCCa                                                                                      <  1:1407608/101‑1 (MQ=255)
                 ggggCGCATTCTCTGAAAGCGCCTGACTTGGCCGCGGCCGGTGACGCGGCCATGCGAGACATCTGCAGTCACCACCGCCGGGGACCAAAGTCCCCGGCCAg                                                                                     <  1:4217902/101‑1 (MQ=255)
                  gggCGCATTCTCTGAAAGCGCCTGACTTGGCCGCGGCCGGTGACGCGGCCATGCGAGACATCTGCAGTCACCACCGCCGGGGACCAAAGTCCCCGGCCAgc                                                                                    <  2:2538910/101‑1 (MQ=255)
                  gggCGCATTCTCTGAAAGCGCCTGACTTGGCCGCGGCCGGTGACGCGGCCATGCGAGACATCTGCAGTCACCACCGCCGGGGACCAAAGTCCCCGGCCAgc                                                                                    >  1:1490887/1‑101 (MQ=255)
                    gcgcATTCTCTGAAAGCGCCTGACTTGGCCGCGGCCGGTGACGCGGCCATGCGAGACATCTGCAGTCACCACCGCCGGGGACCAAAGTCCCCGGCCAgcgc                                                                                  <  1:1034152/101‑1 (MQ=255)
                     cgcATTCTCTGAAAGCGCCTGACTTGGCCGCGGCCGGTGACGCGGCCATGCGAGACATCTGCAGTCACCACCGCCGGGGACCAAAGTCCCCGGCCAGcgcc                                                                                 <  1:2908150/101‑1 (MQ=255)
                     cgcATTCTCTGAAAGCGCCTGACTTGGCCGCGGCCGGTGACGCGGCCATGCGAGACATCTGCAGTCACCACCGCCGGGGACCAAAGTCCCCGGCCAGcgcc                                                                                 >  2:815262/1‑101 (MQ=255)
                     cgcATTCTCTGAAAGCGCCTGACTTGGCCGCGGCCGGTGACGCGGCCATGCGAGACATCTGCAGTCACCACCGCCGGGGACCAAAGTCCCCGGCCAGcgcc                                                                                 <  1:1166844/101‑1 (MQ=255)
                      gcATTCTCTGAAAGCGCCTGACTTGGCCGCGGCCGGTGACGCGGCCATGCGAGACATCTGCAGTCACCACCGCCGGGGACCAAAGTCCCCGGCCAGcgccc                                                                                >  2:1354830/1‑101 (MQ=255)
                      gcATTCTCTGAAAGCGCCTGACTTGGCCGCGGCCGGTGACGCGGCCATGCGAGACATCTGCAGTCACCACCGCCGGGGACCAAAGTCCCCGGCCAGcgccc                                                                                <  2:2325000/101‑1 (MQ=255)
                         ttCTCTGAAAGCGCCTGACTTGGCCGCGGCCGGTGACGCGGCCATGCGAGACATCTGCAGTCACCACCGCCGGGGACCAAAGTCCCCGGCCAGcgcccgcc                                                                             >  2:4146500/1‑101 (MQ=255)
                           ctctGAAAGCGCCTGACTTGGCCGCGGCCGGTGACGCGGCCATGCGAGACATCTGCAGTCACCACCGCCGGGGACCAAAGTCCCCGGCCAGCGcccgcccc                                                                           <  1:3700/101‑1 (MQ=255)
                            tctGAAAGCGCCTGACTTGGCCGCGGCCGGTGACGCGGCCATGCGAGACATCTGCAGTCACCACCGCCGGGGACCAAAGTCCCCGGCCAGCGcccgccccg                                                                          <  1:2250988/101‑1 (MQ=255)
                            tctGAAAGCGCCTGACTTGGCCGCGGCCGGTGACGCGGCCATGCGAGACATCTGCAGTCACCACCGCCGGGGACCAAAGTCCCCGGCCAGCGcccgccccg                                                                          >  1:2592568/1‑101 (MQ=255)
                            tctGAAAGCGCCTGACTTGGCCGCGGCCGGTGACGCGGCCATGCGAGACATCTGCAGTCACCACCGCCGGGGACCAAAGTCCCCGGCCAGCGcccgccccg                                                                          >  2:3845895/1‑101 (MQ=255)
                             ctGAAAGCGCCTGACTTGGCCGCGGCCGGTGACGCGGCCATGCGAGACATCTGCAGTCACCACCGCCGGGGACCAAAGTCCCCGGCCAGCGcccgccccgc                                                                         >  1:1978269/1‑101 (MQ=255)
                               gAAAGCGCCTGACTTGGCCGCGGCCGGTGACGCGGCCATGCGAGACATCTGCAGTCACCACCGCCGGGGACCAAAGTCCCCGGCCAGCGCCcgccccgccc                                                                       >  2:2413567/1‑101 (MQ=255)
                                aaaGCGCCTGACTTGGCCGCGGCCGGTGACGCGGCCATGCGAGACATCTGCAGTCACCACCGCCGGGGACCAAAGTCCCCGGCCAGCGCCCGCCCCGCCCa                                                                      >  1:70446/1‑101 (MQ=255)
                                aaaGCGCCTGACTTGGCCGCGGCCGGTGACGCGGCCATGCGAGACATCTGCAGTCACCACCGCCGGGGACCAAAGTCCCCGGCCAGCGCCCGCCCCGCCCa                                                                      >  2:2705879/1‑101 (MQ=255)
                                 aaGCGCCTGACTTGGCCGCGGCCGGTGACGCGGCCATGCGAGACATCTGCAGTCCCCACCGCCGGGGACCAAAGTCCCCGGCCAGCGCCCGCCCCGCCCAt                                                                     <  2:4606119/101‑1 (MQ=255)
                                 aaGCGCCTGACTTGGCCGCGGCCGGTGACGCGGCCATGCGAGACATCTGCAGTCACCACCGCCGGGGACCAAAGTCCCCGGCCAGCGCCCGCCCCGCCCAt                                                                     <  1:3962022/101‑1 (MQ=255)
                                 aaGCGCCTGACTTGGCCGCGGCCGGTGACGCGGCCATGCGAGACATCTGCAGTCACCACCGCCGGGGACCAAAGTCCCCGGCCAGCGCCCGCCCCGCCCAt                                                                     >  2:359491/1‑101 (MQ=255)
                                 aaGCGCCTGACTTGGCCGCAGCCGGTGACGCGGCCATGCGAGACATCTGCAGTCACCACCGCCGGGGACCAAAGTCCCCGGCCAGCGCCCGCCCCGCCCac                                                                     <  1:3405819/101‑2 (MQ=255)
                                     gcCTGACTTGGCCGCGGCCGGTGACGCGGCCATGCGAGACATCTGCAGTCACCACCGCCGGGGACCAAAGTCCCCGGCCAGCGCCCGCCCCGCCCATAGCg                                                                 <  2:1104142/101‑1 (MQ=255)
                                     gcCTGACTTGGCCGCGGCCGGTGACGCGGCCATGCGAGACATCTGCAGTCACCACCGCCGGGGACCAAAGTCCCCGGCCAGCGCCCGCCCCGCCCATAGCg                                                                 >  1:2502885/1‑101 (MQ=255)
                                     gcCTGACTTGGCCGCGGCCGGTGACGCGGCCATGCGAGACATCTGCAGTCACCACCGCCGGGGACCAAAGTCCCCGGCCAGCGCCCGCCCCGCCCATAGCg                                                                 >  2:3864672/1‑101 (MQ=255)
                                      ccTGACTTGGCCGCGGCCGGTGACGCGGCCATGCGAGACATCTGCAGTCACCACCGCCGGGGACCAAAGTCCCCGGCCAGCGCCCGCCCCGCCCATAGCgg                                                                <  1:1284948/101‑1 (MQ=255)
                                       cTGACTTGGCCGCGGCCGGTGACGCGGCCATGCGAGACATCTGCAGTCACCACCGCCGGGGACCAAAGTCCCCGGCCAGCGCCCGCCCCGCCCATAGCggg                                                               >  2:2071186/1‑101 (MQ=255)
                                        tGACTTGGCCGCGGCCGGTGACGCGGCCATGCGAGACATCTGCAGTCACCACCGCCGGGGACCAAAGTCCCCGGCCAGCGCCCGCCCCGCCCATAGCGGgc                                                              <  2:782135/101‑1 (MQ=255)
                                            ttGGCCGCGGCCGGTGACGCGGCCATGCGAGACATCTGCAGTCACCACCGCCGGGGACCAAAGTCCCCGGCCAGCGCCCGCCCCGCCCATAGCGGGCGCtt                                                          >  1:843136/1‑101 (MQ=255)
                                             tGGCCGCGGCCGGTGACGCGGCCATGCGAGACATCTGCAGTCACCACCGCCGGGGACCAAAGTCCCCGGCCAGCGCCCGCCCCGCCCATAGCGGGCGCTtc                                                         >  2:113902/1‑101 (MQ=255)
                                             tGGCCGCGGCCGGTGACGCGGCCATGCGAGACATCTGCAGTCACCACCGCCGGGGACCAAAGTCCCCGGCCAGCGCCCGCCCCGCCCATAGCGGGCGCTtc                                                         <  2:3645185/101‑1 (MQ=255)
                                              ggCCGCGGCCGGTGACGCGGCCATGCGAGACATCTGCAGTCACCACCGCCGGGGACCAAAGTCCCCGGCCAGCGCCCGCCCCGCCCATAGCGGGCGCTtct                                                        <  2:2211149/101‑1 (MQ=255)
                                               gCCGCGGCCGGTGACGCGGCCATGCGAGACATCTGCAGTCCCCCCCGCCGGGGACCAAAGTCCCCGGCCAGCGCCCGCCCCGCCCATAGCGGGCGCTtctc                                                       <  2:3318188/101‑1 (MQ=255)
                                                ccGCGGCCGGTGACGCGGCCATGCGAGACATCTGCAGTCACCACCGCCGGGGACCAAAGTCCCCGGCCAGCGCCCGCCCCGCCCATAGCGGGCGCTTCTcg                                                      >  1:2297993/1‑101 (MQ=255)
                                                       cGGTGACGCGGCCATGCGAGACATCTGCAGTCACCACCGCCGGGGACCAAAGTCCCCGGCCAGCGCCCGCCCCGCCCATAGCGGGCGCTTCTCGCccgccg                                               <  2:3130186/101‑1 (MQ=255)
                                                        ggTGACGCGGCCATGCGAGACATCTGCAGTCCCCACCGCCGGGGACCAAAGCCCCCGGCCAGCGCCCGCCCCGCCCATAGCGGGCGCTTCTCGCCCGCCgg                                              <  1:1745641/101‑1 (MQ=255)
                                                        ggTGACGCGGCCATGCGAGACATCTGCAGTCACCACCGCCGGGGACCAAAGTCCCCGGCCAGCGCCCGCCCCGCCCATAGCGGGCGCTTCTCGCCCGCCgg                                              >  2:1438939/1‑101 (MQ=255)
                                                         gTGACGCGGCCATGCGAGACATCTGCAGTCCCCACCGCCGGGGACCAAAGTCCCCGGCCAGCGCCCGCCCCGCCCATAGCGGGCGCTTCTCGCCCGCCggg                                             <  2:4078603/101‑1 (MQ=255)
                                                          ggACGCGGCCATGCGAGACATCTGCAGTCCCCACCGCCGGGGACCAAAGTCCCCGGCCAGCGCCCGCCCCGCCCATAGCGGGCGCTTCTCGCCCGCCgggg                                            <  1:2071326/100‑1 (MQ=255)
                                                           gACGCGGCCATGCGAGACATCTGCAGTCACCACCGCCGGGGACCAAAGTCCCCGGCCAGCGCCCCCCCCGCCCATAGCGGGCGCTGCTCGCCCGCCGGGGc                                           >  1:4297776/1‑101 (MQ=255)
                                                             cgcgGCCATGCGAGACATCTGCAGTCACCACCGCCGGGGACCAAAGTCCCCGGCCAGCGCCCGCCCCGCCCATAGCGGGCGCTTCTCGCCCGCCGGGGCAg                                         <  1:4138962/101‑1 (MQ=255)
                                                               cgGCCATGCGAGACATCTGCAGTCACCACCGCCGGGGACCAAAGTCCCCGGCCAGCGCCCGCCCCGCCCATAGCGGGCGCTTCTCGCCCGCCGGGGCAGgc                                       >  1:587500/1‑101 (MQ=255)
                                                               cgGCCATGCGAGACATCTGCAGTCACCACCGCCGGGGACCAAAGTCCCCGGCCAGCGCCCGCCCCGCCCATAGCGGGCGCTTCTCGCCCGCCGGGGCAGgc                                       >  1:170965/1‑101 (MQ=255)
                                                               cgGCCATGCGAGACATCTGCAGTCACCACCGCCGGGGACCAAAGTCCCCGGCCAGCGCCCGCCCCGCCCATAGCGGGCGCTTCTCGCCCGCCGGGGCAGgc                                       >  1:4290684/1‑101 (MQ=255)
                                                                ggCCATGCGAGACATCTGCAGTCCCCACCGCCGGGGACCAAAGTCCCCGGCCAGCGCCCGCCCCGCCCATAGCGGGCGCTTCTCGCCCGCCGGGGCAGgcg                                      >  2:2305200/1‑101 (MQ=255)
                                                                ggCCAGGCGAGACATCTGCAGTCACCACCGCCGGGGACCAAAGTCCCCGGCCAGCGCCCGCCCCGCCCATAGCGGGCGCTTCTCGCCCGCCGGGGCAGgcg                                      <  2:82879/101‑1 (MQ=255)
                                                                cgCCATGCGCGGCATCTGCGTCCCCCGCCGCCGGGGCCGGAACTCCCCGTCCGGCGCCCGCCCCGCCCATAGCGGGCGCTTCTCGCCCGCCGGGGCAGgcg                                      <  1:631489/100‑1 (MQ=12)
                                                                 gCCATGCGAGACATCTGCAGTCACCACCGCCGGGGACCAAAGTCCCCGGCCAGCGCCCGCCCCGCCCATAGCGGGCGCTTCTCGCCCGCCGGGGCAGgcgc                                     <  1:2662422/101‑1 (MQ=255)
                                                                 gCCATGCGAGACATCTGCAGTCACCACCGCCGGGGACCAAAGTCCCCGGCCAGCGCCCGCCCCGCCCATAGCGGGCGCTTCTCGCCCGCCGGGGCAGgcgc                                     >  1:3226519/1‑101 (MQ=255)
                                                                    aTGCGAGACATCTGCAGTCACCACCGCCGGGGACCAAAGTCCCCGGCCAGCGCCCGCCCCGCCCATAGCGGGCGCTTCTCGCCCGCCGGGGCAGGCGCCgg                                  >  1:2203778/1‑101 (MQ=255)
                                                                      gCGAGACATCTGCAGTCACCACCGCCGGGGACCAAAGTCCCCGGCCAGCGCCCGCCCCGCCCATAGCGGGCGCTTCTCGCCCGCCGGGGCAGGCGCCGGcc                                >  2:3736651/1‑101 (MQ=255)
                                                                         agaCATCTGCAGCCACCACCGCCGGGGACCAAAGCCCCCGGCCAGCGCCCGCCCCGCCCATAGCGGGCGCTTCTCGCCCGCCGGGGCAGGCGCCGGCctct                             <  2:2951118/101‑1 (MQ=255)
                                                                          gaCATCTGCAGTCACCACCGCCGGGGACCAAAGTCCCCGGCCAGCGCCCGCCCCGCCCATAGCGGGCGCTTCTCGCCCGCCGGGGCAGGCGCCGGCCTCTg                            >  2:2657096/1‑101 (MQ=255)
                                                                            cATCTGCAGTCCCCACCGCGGGGGACCAAAGTCCCCGGCCAGCGCCCGCCCCGCCCATAGCGGGCGCTTCTCGCCCGCCGGGGCAGGCGCCGGCCTCTGtt                          <  1:2744729/101‑1 (MQ=255)
                                                                            cATCTGCAGTCACCACCGCCGGGGACCAAAGTCCCCGGCCAGCGCCCGCCCCGCCCATAGCGGGCGCTTCTCGCCCGCCGGGGCAGGCGCCGGCCTCTGtt                          >  1:357093/1‑101 (MQ=255)
                                                                              tCTGCAGTCACCACCGCCGGGGACCAAAGTCCCCGGCCAGCGCCCGCCCCGCCCATAGCGGGCGCTTCTCGCCCGCCGGGGCAGGCGCCGGCCTCTGTTgc                        >  2:4413570/1‑101 (MQ=255)
                                                                              tCTGCAGTCACCACCGCCGGGGACCAAAGTCCCCGGCCAGCGCCCGCCCCGCCCATAGCGGGCGCTTCTCGCCCGCCGGGGCAGGCGCCGGCCTCTGTTgc                        >  1:3746842/1‑101 (MQ=255)
                                                                               cTGCAGTCACCACCGCCGGGGACCAAAGTCCCCGGCCAGCGCCCGCCCCGCCCATAGCGGGCGCTTCTCGCCCGCCGGGGCAGGCGCCGGCCTCTGTTgcg                       >  1:3136007/1‑101 (MQ=255)
                                                                                 gcatccaccccCGCCGGGCACCAAATCCCCCGGCCAGCGCCCGCCCCGCCCATAGCGGTCGCTTCTCGCCCGCCGGGGCAGGCGCCGGCCTCTGTTgcgcg                     <  2:613276/96‑1 (MQ=17)
                                                                                 gCAGTCACCACCGCCGGGGACCAAAGTCCCCGGCCAGCGCCCGCCCCGCCCATAGCGGGCGCTTCTCGCCCGCCGGGGCAGGCGCCGGCCTCTGTTgcgcg                     >  2:1224451/1‑101 (MQ=255)
                                                                                   cgTCCCCCCCGCCGGGTACCAAAGCCCCCGNCCAGCGCCCGCCCCGCCCATAGCGGGCGCTTCTCGCCCGCCGGGGCAGGCGCCGGCCTCTGTTGcgcgcg                   <  1:54794/100‑1 (MQ=17)
                                                                                   aGTCACCACCGCCGGGGACCAAAGTCCCCGGCCAGCGCCCGCCCCGCCCATAGCGGGCGCTTCTCGCCCGCCGGGGCAGGCGCCGGCCTCTGTTGcgcgcg                   >  2:1916288/1‑101 (MQ=255)
                                                                                   aGTCACCACCGCCGGGGACCAAAGTCCCCGGCCAGCGCCCGCCCCCCCCATAGCGGGGGCTTCTCGCCCGCCGGGGCAGGCGCCGGCCCCTGTTgcgcggg                   >  1:1235042/1‑99 (MQ=255)
                                                                                    gtccccccggccgGGGACAAAGGCCCCCGGCCAGCGCCCGCCCCGCCCATAGCGGGCGCTTCTCGCCCGCCGGGGCAGGCGCCGGCCTCTGTTGCGCGCgg                  <  2:1714635/92‑1 (MQ=14)
                                                                                     tCACCACCGCCGGGGACCAAAGTCCCCGGCCAGCGCCCGCCCCGCCCATAGCGGGCGCTTCTCGCCCGCCGGGGCAGGCGCCGGCCTCTGTTGCGCGCggg                 >  1:1366013/1‑101 (MQ=255)
                                                                                      caccacCGCCGGGGACCAAAGTCCCCGGCCAGCGCCCGCCCCGCCCATAGCGGGCGCTTCTCGGCCGCCGGGGCAGGCGCCGGCCTCTGTTGCGCGCgggg                >  2:3105181/1‑101 (MQ=255)
                                                                                       ccccccgccgGGGACCAAAGCCCCCGGCCAGCGCCCGCCCCGCCCATAGCGGGCGCTTCTCGCCCGCCGGGGCAGGCGCCGGCCTCTGTTGCGCGCGGGGc               <  1:706124/97‑1 (MQ=255)
                                                                                       accaccGCCGGGGCCCAAGGTCCCGGCCCAGCGCCCGCCCCGCCCATAGCGGGCGCTTCTCGCCCGCCGGGGCAGGCGCCGGCCTCTGTTGCGCGCGGGGc               <  2:1490778/101‑1 (MQ=18)
                                                                                       accaccGCCGGGGACCAAAGTCCCCGGCCAGCGCCCGCCCCGCCCATAGCGGGCGCTTCTCGCCCGCCGGGGCAGGCGCCGGCCTCTGTTGCGCGCGGGGc               >  2:2026762/1‑101 (MQ=255)
                                                                                       accaccGCCGGGGACCAAAGTCCCCGGCCAGCGCCCGCCCCGCCCATAGCGGGCGCTTCTCGCCCGCCGGGGCAGGCGCCGGCCTCTGTTGCGCGCGGGGc               >  1:3343939/1‑101 (MQ=255)
                                                                                       accaccGCCGGGGACCAAAGTCCCCGGCCAGCGCCCGCCCCGCCCATAGCGGGCGCTTCTCGCCCGCCGGGGCAGGCGCCGGCCCCTGTTG.GGGCgggggg              >  1:3493846/1‑99 (MQ=18)
                                                                                        ccacgGCCGGGGCCCAAAGCCCCCGGCCAGCGCCCGCCCCGCCCATAGCGGGCGCTTCTCGCCCGCCGGGGCAGGCGCCGGCCTCTGTTGCGCGCGGGGCa              <  2:2489984/101‑1 (MQ=255)
                                                                                         cccccccgGGGACCAAAGCCCCCGGCCAGCGCCCGCCCCGCCCATAGCGGGCGCTTCTCGCCCGCCGGGGCAGGCGCCGGCCTCTGTTGCGCGCGGGGCAg             <  1:3841489/96‑1 (MQ=255)
                                                                                           ccgcggGGGACCAAAGCCCCCGGCCAGCGCCCGCCCCGCCCATAGCGGGCGCTTCTCGCCCGCCGGGGCAGGCGCCGGCCTCTGTTGCGCGCGGGGCAGAc           <  1:2108787/101‑1 (MQ=255)
                                                                                           ccgccgGGGACCAGGGTCCCCGGCATGCGCCCGCCCCGCCCATAGCGGGCGCTTCTCGCCCGCCGGGGCAGGCGCCGGCCTCTGTTGCGCGCGGGGCAGAc           <  1:2973624/101‑1 (MQ=18)
                                                                                           ccgccgGGGACCAAAGCCCCCGGCCAGCGCCCGCCCCGCCCATAGCGGGCGCTTCTCGCCCGCCGGGGCAGGCGCCGGCCTCTGTTGCGCGCGGGGCAGAc           <  1:2402511/101‑1 (MQ=255)
                                                                                           ccgccgGGGACCAAAGCCCCCGCCCAGCGCCCGCCCCGCCCATAGCGGGCGCTTCTCGCCCGCCGGGGCAGGCGCCGGCCTCTGTTGCGCGCGGGGCAGAc           <  2:3058909/101‑1 (MQ=255)
                                                                                            cgccgAGGACCAAAGCCCCGGGCCAGCGCCCGCCCCGCCCATAGCGGGCGCTTCTCGCCCGCCGGGGCAGGCGCCGGCCTCTGTTGCGCGCGGGGCAGACg          <  2:664559/101‑1 (MQ=255)
                                                                                              ccgGGGACCAAAGCCCCCGGCCGGCGCCCGCCCCGCCCATAGCGGGCGCTTCTCGCCCGCCGGGGCAGGCGCCGGCCTCTGTTGCGCGCGGGGCAGACGGt        <  1:4530870/101‑1 (MQ=255)
                                                                                               cgGGGACCAAAGCCCCCGGCCAGCGCCCGCCCCGCCCATAGCGGGCGCTTCTCGCCCGCCGGGGCAGGCGCCGGCCTCTGTTGCGCGCCGGGCAGACGGTc       <  1:2521200/101‑1 (MQ=255)
                                                                                                ggggACCAAAGTCCCCGGCCAGCGCCCGCCCCGCCCATAGCGGGCGCTTCTCGCCCGCCGGGGCAGGCGCCGGCCTCTGTTGCGCGCGGGGCAGACGGTCt      >  2:3797808/1‑101 (MQ=255)
                                                                                                ggggACCAAAGTCCCCGGCCAGCGCCCGCCCCGCCCATACCGGGAGCTTCTCGCCCGCCGGGGCAGGCGCCGGCCTCTGTTGCGCGCGGGGCAGACGGTCt      >  1:3783438/1‑101 (MQ=255)
                                                                                                ggggACCAAAGCCCCCGGCCGGCGCCCGCCCCGCCCATAGCGGGCGCTTCTCGCCCGCCGGGGCAGGCGCCGGCCTCTGTTGCGCGCGGGGCAGACGGTCt      <  1:2876800/101‑1 (MQ=255)
                                                                                                ggggACCAAAGCCCCCGGCCAGCGCCCGCCCCGCCCATAGCGGGCGCTTCTCGCCCGCCGGGGCAGGCGCCGGCCTCTGTTGCGCGCGGGGCAGACGGTCt      <  2:3285426/101‑1 (MQ=255)
                                                                                                 gggCCCAAGGCCCCCGGCCCGCGCCCGCCCCGCCCATAGCGGGCGCTTCTCGCCCGCCGGGGCAGGCGCCGGCCTCTGTTGCGCGCGGGGCAGACGGTCtt     <  1:3435464/101‑1 (MQ=17)
                                                                                                    aCCAAAGTCCCCGGCCAGCGCCCGCCCCGCCCATAGCGGGCGCTTCTCGCCCGCCGGGGCAGGCGCCGGCCTCTGTTGCGCGCGGGGCAGACGGTCTTGgc  >  2:4329546/1‑101 (MQ=255)
                                                                                                    aCCAAAGTCCCCGGCCAGCGCCCGCCCCGCCCATAGCGGGCGCTTCTCGCCCGCCGGGGCAGGCGCCGGCCTCTGTTGCGCGCGGGGCAGACGGTCTTGgc  >  1:3026941/1‑101 (MQ=255)
                                                                                                    |                                                                                                    
CCGCCTTGGTCTTTTCGGGGGCGCATTCTCTGAAAGCGCCTGACTTGGCCGCGGCCGGTGACGCGGCCATGCGAGACATCTGCAGTCACCACCGCCGGGGACCAAAGTCCCCGGCCAGCGCCCGCCCCGCCCATAGCGGGCGCTTCTCGCCCGCCGGGGCAGGCGCCGGCCTCTGTTGCGCGCGGGGCAGACGGTCTTGGC  >  NC_014034/2953219‑2953419

Base quality scores:  ATCG  < 3 ≤  ATCG  < 15 ≤  ATCG  < 23 ≤  ATCG  < 32 ≤  ATCG  < 40 ≤  ATCG