BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_014034	1,960,668	Δ1 bp	96.4%	coding (1111/1539 nt)	RCAP_rcc01813 ←	AMP‑dependent synthetase and ligase

Read alignment evidence...
	seq id	position		change	freq	score	reads	annotation	genes	product
*	NC_014034	1,960,668	0	G→.	96.4%	15.1 ‑2.1 ‑0.8	192	coding (1111/1539 nt)	RCAP_rcc01813	AMP‑dependent synthetase and ligase
Reads supporting (aligned to +/- strand): new base (87/98): ref base (1/6): total (88/104)
Fisher's exact test strand distribution p-value = 1.27e-01
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 1.45e-01

Only 100 of 212 total aligned reads displayed.


CCTGATAGGCGATGGCCCCGGCCTCGGTCATCCGCACGATGTCGCCGGTGCGGAACCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCT.CGG.CTCGGCGGCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGCAATGCACCGACAGCTCGCCCGGTTCGCCCCGGGGCACCGGATG.GCCTCCGGGGGACAGGAC  >  NC_014034/1960569‑1960764


ccTGATAGGCGATGGCCCCGGCCTCGGTCATCCGCACGATGTCGCCGGTGCGGAACCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCT.CGGCCTcggcg                                                                                                   <  2:1179697/101‑1 (MQ=255)


 cTGATAGGCGATGGCCCCGGCCTCGGTCATCCGCACGATGTCGCCGGTGCGGAACCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCT.CGGCCTcggcgc                                                                                                  <  2:1638113/101‑2 (MQ=255)


 cTGATAGGCGATGGCCCCGGCCTCGGTCATCCGCACGATGTCGCCGGTGCGGAACCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCT.CGGCCTcggcgc                                                                                                  >  2:3731277/1‑100 (MQ=255)


 cTGATAGGCGATGGCCCCGGCCTCGGTCATCCGCACGATGCCGCCGGGGCGGAACCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCT.CGGCCTcggcgc                                                                                                  >  1:337616/1‑100 (MQ=255)


    aTAGGCGATGGCCCCGGCCTCGGTCATCCGCACGATGTCGCCGGTGCGGAACCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCT.CGGCCTCGGCGCccc                                                                                               <  2:4026459/101‑1 (MQ=255)


    aTAGGCGATGGCCCCGGCCTCGGTCATCCGCACGATGTCGCCGGTGCGGAACCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCT.CGGCCTCGGCGCccc                                                                                               >  1:764713/1‑101 (MQ=255)


     tAGGCGATGGCCCCGGCCTCGGTCATCCGCACGATGTCGCCGGTGCGGAACCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCT.CGGCCTCGGCGCccca                                                                                              <  2:3301348/101‑2 (MQ=255)


       ggCGATGGCCCCGGCCTCGGTCATCCGCACGATGTCGCCGGTGCGGAACCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCT.CGGCCTCGGC.GCCCCAAt                                                                                           <  1:2945812/101‑1 (MQ=255)


         cGATGGCCCCGGCCTCGGTCATCCGCACGATGTCGCCGGTGCGGAACCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCT.CGGCCTCGGC.GCCCCAATAg                                                                                         >  2:3090891/1‑101 (MQ=255)


          gATGGCCCCGGCCTCGGTCATCCGCACGATGTCGCCGGTGCGGAACCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCT.CGGCCTCGGC.GCCCCAATAGc                                                                                        <  2:3482764/101‑1 (MQ=255)


           aTGGCCCCGGCCTCGGTCATCCGCACGATGTCGCCGGTGCGGAACCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCT.CGGCCTCGGC.GCCCCAATAGcc                                                                                       <  1:3155895/101‑1 (MQ=255)


           aTGGCCCCGGCCTCGGTCATCCGCACGATGTCGCCGGTGCGGAACCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCT.CGGCCTCGGC.GCCCCAATAGcc                                                                                       <  2:219648/101‑1 (MQ=255)


             ggCCCCGGCCTCGGTCATCCGCACGATGTCGCCGGTGCGGAACCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCT.CGGCCTCGGC.GCCCCAATAGCCGa                                                                                     >  1:3654115/1‑101 (MQ=255)


             ggCCCCGGCCTCGGTCATCCGCACGATGTCGCCGGTGCGGAACCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCT.CGGCCTCGGC.GCCCCAATAGCCGa                                                                                     >  1:4304204/1‑101 (MQ=255)


             ggCCCCGGCCTCGGTCATCCGCACGATGTCGCCGGTGCGGAACCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCT.CGGCCTCGGC.GCCCCAATAGCCGa                                                                                     >  2:3818492/1‑101 (MQ=255)


             ggCCCCGGCCTCGGTCATCCGCACGATGTCGCCGGTGCGGAACCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCT.CGGCCTCGGC.GCCCCAATAGCCGa                                                                                     >  1:2955892/1‑101 (MQ=255)


               ccccGGCCTCGGTCATCCGCACGATGTCGCCGGTGCGGACCCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCT.CGGCCTCGGC.GCCCCAATAGCCGAgg                                                                                   <  1:777065/101‑1 (MQ=255)


                cccGGCCTCGGTCATCCGCACGATGTCGCCGGTGCGGAACCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCT.CGGCCTCGGC.GCCCCAATAGCCGAGGa                                                                                  <  1:1302164/101‑1 (MQ=255)


                 ccGGCCTCGGTCATCCGCACGATGTCGCCGGTGCGGAACCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCT.CGGCCTCGGC.GCCCCAATAGCCGAGGaa                                                                                 <  1:2574300/101‑1 (MQ=255)


                   ggCCTCGGTCATCCGCACGATGTCGCCGGTGCGGAACCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCTCCGC.CTCGGC.GCCCCAATAGCCGAGGaaaa                                                                               >  2:254859/1‑101 (MQ=255)


                   ggCCTCGGTCATCCGCACGATGTCGCCGGTGCGGAACCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCT.CGGCCTCGGC.GCCCCAATAGCCGAGGaaaa                                                                               <  2:174698/101‑1 (MQ=255)


                   ggCCTCGGTCATCCGCACGATGTCGCCGGTGCGGAACCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCT.CGGCCTCGGC.GCCCCAATAGCCGAGGaaaa                                                                               >  1:29182/1‑101 (MQ=255)


                    gCCTCGGTCATCCGCACGATGTCGCCGGTGCGGAACCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCT.CGGCCTCGGC.GCCCCAATAGCCGAGGAAAAg                                                                              <  1:1396137/101‑1 (MQ=255)


                    gCCTCGGTCATCCGCACGATGTCGCCGGTGCGGAACCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCT.CGGCCTCGGC.GCCCCAATAGCCGAGGAAAAg                                                                              <  2:415987/101‑1 (MQ=255)


                    gCCTCGGTCATCCGCACGATGTCGCCGGTGCGGAACCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCT.CGGCCTCGGC.GCCCCAATAGCCGAGGAAAAg                                                                              <  2:1441590/101‑1 (MQ=255)


                        cGGTCATCCGCACGATGTCGCCGGTGCGGAACCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCT.CGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGcccc                                                                          >  2:1555505/1‑101 (MQ=255)


                         ggTCATCCGCACGATGTCGCCGGTGCGGAACCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCT.CGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCg                                                                         >  2:2791482/1‑101 (MQ=255)


                          gTCATCCGCACGATGTCGCCGGTGCGGAACCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCT.CGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCgg                                                                        >  2:3365074/1‑101 (MQ=255)


                          gTCATCCGCACGATGTCGCCGGTGCGGAACCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCT.CGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCgg                                                                        <  2:190160/101‑1 (MQ=255)


                           tCATCCGCACGATGTCGCCGGTGCGGAACCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCT.CGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCGGa                                                                       <  1:1828659/101‑1 (MQ=255)


                           tCATCCGCACGATGTCGCCGGTGCGGAACCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCC.CGGCCTCGGC.GCCCCCATAGCCCAGGAAAAACCCCggc                                                                       >  1:3730203/1‑100 (MQ=255)


                            cATCCGCACGATGTCGCCGGTGCGGAACCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCT.CGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCGGAt                                                                      >  1:1869265/1‑101 (MQ=255)


                            cATCCGCACGATGTCGCCGGTGCGGAACCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCT.CGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCGGAt                                                                      <  1:4193293/101‑1 (MQ=255)


                             aTCCGCACGATGTCGCCGGTGCGGAACCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCT.CGGCCTCGGC.GCCCCAATAGCCNAGGAAAAGCCCCGGNNc                                                                     >  2:1626804/1‑101 (MQ=255)


                              tCCGCACGATGTCGCCGGTGCGGAACCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCT.CGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCGGATCg                                                                    <  1:594608/101‑1 (MQ=255)


                               ccGCACGATGTCGCCGGTGCGGAACCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCT.CGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGc                                                                   >  2:2951388/1‑101 (MQ=255)


                                 gCACGATGTCGCCGGTGCGGAACCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCT.CGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTg                                                                 >  2:3964710/1‑101 (MQ=255)


                                 gCACGATGTCGCCGGTGCGGAACCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCT.CGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTg                                                                 >  1:4055098/1‑101 (MQ=255)


                                  cACGATGTCGCCGGTGCGGAACCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCT.CGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGc                                                                <  2:1258660/101‑1 (MQ=255)


                                  cACGATGTCGCCGGTGCGGAACCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCT.CGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGc                                                                >  2:1687288/1‑101 (MQ=255)


                                  cACGATGTCGCCGGTGCGGAACCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCT.CGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGc                                                                <  1:1710734/101‑1 (MQ=255)


                                     gATGTCGCCGGTGCGGAACCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCT.CGGCCTCGGC.GCCCCAATAGCCGAGGAGAAGCCCCGGATCGCTCCaac                                                             >  1:1102617/1‑100 (MQ=255)


                                        gTCGCCGGTGCGGAACCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCT.CGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGCAATGCa                                                          >  2:2937038/1‑101 (MQ=255)


                                          cGCCGGTGCGGAACCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCT.CGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGCAATGCAcc                                                        <  2:2578757/101‑1 (MQ=255)


                                          cGCCGGTGCGGAACCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCT.CGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGCAATGCAcc                                                        <  2:4060972/101‑1 (MQ=255)


                                          cGCCGGTGCGGAACCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCT.CGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGCAATGCAcc                                                        <  2:4439650/101‑1 (MQ=255)


                                           gCCGGTGCGGAACCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCT.CGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGCAATGCACCg                                                       >  1:2867413/1‑101 (MQ=255)


                                            ccGGTGCGGAACCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCT.CGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGCAATGCACCGa                                                      <  2:2758070/101‑1 (MQ=255)


                                            ccGGTGCGGAACCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCT.CGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGCAATGCACCGa                                                      <  2:2847745/101‑1 (MQ=255)


                                              ggTGCGGAACCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCT.CGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGCAATGCACCGACa                                                    <  1:2799307/101‑1 (MQ=255)


                                              ggTGCGGAACCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCT.CGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGCAATGCACCGACa                                                    >  1:3320501/1‑101 (MQ=255)


                                               gTGCGGAACCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCT.CGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGCAATGCACCGCCAg                                                   >  2:3799356/1‑101 (MQ=255)


                                                tGCGGAACCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCT.CGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGCAATGCACCGACAGc                                                  <  2:3520152/101‑1 (MQ=255)


                                                 gCGGAACCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCT.CGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGCAATGCACCGACAGCt                                                 <  2:881328/101‑1 (MQ=255)


                                                 gCGGAACCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCT.CGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGCAATGCACCGACAGCt                                                 >  2:3162525/1‑101 (MQ=255)


                                                  cGGAACCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCT.CGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGCGATGCACCGACAGCTc                                                <  1:3456579/101‑1 (MQ=255)


                                                  cGGAACCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCT.CGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGCAATGCACCGACAGCTc                                                <  2:1519140/101‑1 (MQ=255)


                                                  cGGAACCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCT.CGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGCAATGCACCGACAGCTc                                                <  1:2691864/101‑1 (MQ=255)


                                                  cGGAACCAGTCCCCGTCCGCGGTCAACTTTGCCCGCGCCT.CGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGCAATGCACCGACAGCTc                                                <  2:595262/101‑1 (MQ=255)


                                                   ggAACCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCT.CGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGCAATGCACCGACAGCTcc                                               >  1:3840309/1‑100 (MQ=255)


                                                    gAACCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCT.CGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGCAATGCACCGACAGCTCGc                                              >  1:3272361/1‑101 (MQ=255)


                                                     aaCCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCT.CGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGCAATGCACCGACAGCTCGcc                                             <  2:433813/101‑1 (MQ=255)


                                                       ccAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCT.CGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGCAATGCACCGACAGCTCGCCCg                                           >  1:1966271/1‑101 (MQ=255)


                                                        cAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCT.CGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGCAATGCACCGACAGCTCGCCCgg                                          <  2:3006415/101‑1 (MQ=255)


                                                        cAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCT.CGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGCAATGCACCGACAGCTCGCCCgg                                          >  2:2000850/1‑101 (MQ=255)


                                                           tCCCCGTCCGCGGTGAACTTTGCCCGCGCCT.CGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGCAATGCACCGACAGCTCGCCCGGTTc                                       <  1:1144462/101‑1 (MQ=255)


                                                              ccGTCCGCGGTGAACTTTGCCCGCGCCT.CGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGCAATGCACCGACAGCTCGCCCGGTTCGcc                                    <  2:67144/101‑1 (MQ=255)


                                                               cGTCCGCGGTGAACTTTGCCCGCGCCT.CGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGCAATGCACCGACAGCTCGCCCGGTTCGccc                                   >  1:3195823/1‑101 (MQ=255)


                                                                 tCCGCGGTGAACTTTGCCCGCGCCT.CGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGCAATGCACCGACAGCTCGCCCGGTTCGCCCCg                                 >  2:724318/1‑101 (MQ=255)


                                                                  ccGCGGTGAACTTTGCCCGCGCCT.CGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCGGATAGCTGCAATGCACCGACAGCTCGCCCGGTTCGCCCCgg                                >  2:1765172/1‑101 (MQ=255)


                                                                     cgGTGAACTTTGCCCGCGCCT.CGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGCAATGCACCGACAGCTCGCCCGGTTCGCCCCGGGGc                             >  1:1501949/1‑101 (MQ=255)


                                                                       gTGAACTTTGCCCGCGCCT.CGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGCAATGCACCGACAGCTCGCCCGGTTCGCCCCGGGGCAc                           <  1:3521764/101‑1 (MQ=255)


                                                                        tGAACTTTGCCCGCGCCT.CGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGCAATGCACCGACAGCTCGCCCGGTTCGCCCCGGGGCAcc                          >  1:812683/1‑101 (MQ=255)


                                                                         gAACTTTGCCCGCGCCT.CGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGCAATGCACCGACAGCTCGCCCGGTTCGCCCCGGGGCACCg                         >  1:3678514/1‑101 (MQ=255)


                                                                          aaCTTTGCCCGCGCCT.CGGCCTCGGC.GCCCCAAAAGCCGAGGAAAAGCCCCGGATCGCTGCAATGCACCGACAGCTCGCCCGGTTCGCCCCGGGGCACCgg                        <  1:3864035/101‑1 (MQ=255)


                                                                            cTTTGCCCGCGCCT.CGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGCAATGCACCGACAGCTCGCCCGGTTCGCCCCGGGGCACCGGAt                      <  1:2337075/101‑1 (MQ=255)


                                                                            cTTTGCCCGCGCCT.CGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGCAATGCACCGACAGCTCGCCCGGTTCGCCCCGGGGCACCGGAt                      <  1:724398/101‑1 (MQ=255)


                                                                            cTTTGCCCGCGCCT.CGGCCTCGGC.GCCCCAACAGCCGAGGAAAAGCCCCGGATCGCTGCAATGCACCGACAGCTCGCCCGGTTCGCCCCGGGGCACCGGAt                      <  1:1797289/101‑1 (MQ=255)


                                                                             tttGCCCGCGCCT.CGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGCAATGCACCGACAGCTCGCCCGGTTCGCCCCGGGGCACCGGATg                     >  2:3263816/1‑101 (MQ=255)


                                                                              ttGCCCGCGCCT.CGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGCAATGCACCGACAGCTCGCCCGGTTCGCCCCGGGGCACCGGATg.g                   <  1:1528972/101‑1 (MQ=255)


                                                                              ttGCCCGCGCCT.CGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGCAATGCACCGACAGCTCGCCCGGTTCGCCCCGGGGCACCGGATg.g                   <  1:706113/101‑1 (MQ=255)


                                                                                 cccGCGCCT.CGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCTGATCGCTCCAATGCACCGACAGCTCGCCCGGTTCGCCCCGGTGCACCGGATG.Gccc                >  1:4416681/1‑100 (MQ=255)


                                                                                   cgcgCCT.CGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGCAATGCACCGACAGCTCGCCCGGTTCGCCCCGGGGCACCGGATG.Gccctc              >  2:3585075/1‑98 (MQ=255)


                                                                                   cgcgCCT.CGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGCAATGCACCGACAGCTCGCCCGGTTCGCCCCGGGGCACCGGATG.Gccctc              <  1:903104/101‑4 (MQ=255)


                                                                                   cgcgCCT.CGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGCAATGCACCGACAGCTCGCCCGGTTCGCCCCGGGGCACCGGATG.Gccctc              <  2:2867205/101‑4 (MQ=255)


                                                                                   cgcgCCC.CGGCCTCGGC.GCCCCAATAGCCGGGGAAAAGCCCCGGATCGCTGCAATGCACCGACAGCTCGCCCGGTTCGCCCCGGGGCACCGGATG.Gccctc              <  1:1039082/101‑4 (MQ=255)


                                                                                    gcgcCT.CGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGCAATGCACCGACAGCTCGCCCGGTTCGCCCCGGGGCACCGGATG.Gccctcg             >  2:2362980/1‑97 (MQ=255)


                                                                                    gcgcCT.CGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGCAATGCACCGACAGCTCGCCCGGTTCGCCCCGGGGCACCGGATG.Gccctcg             >  2:1741663/1‑97 (MQ=255)


                                                                                      gcCT.CGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGCAATGCACCGACAGCTCGCCCGGTTCGCCCCGGGGCACCGGATGTGCCTCGgg            >  2:18071/1‑101 (MQ=255)


                                                                                      gcCT.CGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGCAATGCACCGACAGCTCGCCCGGTTCGCCCCGGGGCACCGGATG.GCCCTCggg           >  1:1431737/1‑101 (MQ=255)


                                                                                      gcCT.CGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGCAATGCACCGACAGCTCGCCCGGTTCGCCCCGGGGCACCGGATG.GCCCTCggg           >  1:2252644/1‑101 (MQ=255)


                                                                                        ct.cggcctcgGC.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGCAATGCACCGACAGCTCGCCCGGTTCGCCCCGGGGCACCGGATG.GCCCTCggggg         <  1:2502085/101‑1 (MQ=255)


                                                                                          tcggcctcggc.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGCAATGCACCGACAGCTCGCCCGGTTCGCCCCGGGGCACCGGATG.GCCCTCGGGGGa        >  1:3203036/6‑101 (MQ=255)


                                                                                           cggcctcggc.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGCAATGCACCGACAGCTCGCCCGGTTCGCCCCGGGGCACCGGATG.GCCCTCgggggca       >  2:1471740/5‑99 (MQ=255)


                                                                                           cggcctcggc.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGCAATGCACCGACAGCTCGCCCGGTTCGCCCCGGGGCACCGGATG.GCCCTCGGGGGAc       <  1:381831/97‑1 (MQ=255)


                                                                                            ggcctcggc.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGCAATGCACCGACAGCTCGCCCGGTTCGCCCCGGGGCACCGGATG.GCCCTCGGGGGACa      >  2:552456/4‑101 (MQ=255)


                                                                                            ggcctcggc.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGCAATGCACCGACAGCTCGCCCGGTTCGCCCCGGGGCACCGGATG.GCCCTCGGGGGACa      >  2:2652114/4‑101 (MQ=255)


                                                                                             gcctcggc.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGCAATGCACCGACAGCTCGCCCGGTTCGCCCCGGGGCACCGGATG.GCCCTCGGGGGACAg     >  2:1099551/3‑101 (MQ=255)


                                                                                               ctcggc.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGCAATGCACCGACAGCTCGCCCGGTTCGCCCCGGGGCACCGGATG.GCCCTCGGGGGACAGGa   >  2:1278720/1‑101 (MQ=255)


                                                                                                tcggc.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGCAATGCACCGACAGCTCGCCCGGTTCGCCCCGGGGCACCGGATG.GCCCTCGGGGGACAGGAc  >  1:1209613/1‑101 (MQ=255)


CCTGATAGGCGATGGCCCCGGCCTCGGTCATCCGCACGATGTCGCCGGTGCGGAACCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCT.CGG.CTCGGCGGCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGCAATGCACCGACAGCTCGCCCGGTTCGCCCCGGGGCACCGGATG.GCCTCCGGGGGACAGGAC  >  NC_014034/1960569‑1960764

Base quality scores:


ATCG

< 3 ≤


ATCG

< 20 ≤


ATCG

< 27 ≤


ATCG

< 33 ≤


ATCG

< 41 ≤


ATCG