| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 432,464 | Δ1 bp | 4.6% | intergenic (+67/+81) | RCAP_rcc00403 → / ← RCAP_rcc00404 | hypothetical protein/Sua5/YciO/YrdC/YwlC family protein |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 432,464 | 0 | G→. | 4.6% | 17.5 ‑1.2 ‑0.3 | 172 | intergenic (+67/+81) | RCAP_rcc00403/RCAP_rcc00404 | hypothetical protein/Sua5/YciO/YrdC/YwlC family protein |
| Reads supporting (aligned to +/- strand): new base (5/3): ref base (71/93): total (76/96) | ||||||||||
| Fisher's exact test strand distribution p-value = 3.04e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 5.59e-01 | ||||||||||
Only 100 of 186 total aligned reads displayed.
CGCACGCTTTCGGCGGCGGCGGGCCACGCCTGAGGCCGGGCAGGGGGGCGCTGCCCCCC.GT.C.TGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATCTTGCCCCAAATATCCCGGGGGTG.AATTTTGGCGCAGCCAAAAGAGGGGGCAGCGCCCCCTATCCCCGCGGCGCGGC > NC_014034/432365‑432562
|
cgcACGCTTTCGGCGGCGGCGGGCCACGCCTGAGGCCGGGCAGGGGGGCGCTGCCCCCC.GTCC.TGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAg < 1:4073935/101‑1 (MQ=255)
gcACGCTTTCGGCGGCGGCGGGCCACGCCGGAGGCCGGGCAGGGGGGCGCGGCCCCCCGGC.C.TGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGc < 1:2678140/101‑1 (MQ=21)
cACGCTTTCGGCGGCGGCGGGCCACGCCTGAGGCCGGGCAGGGGGGCGCTGCCCCCC.GTCC.TGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGcc < 2:686013/101‑1 (MQ=255)
cACGCTTTCGGCGGCGGCGGGCCACGCCTGAGGCCGGGCAGGGGGGCGCTGCCCCCC.GTCC.TGCGGACTCCCCCCCGGATATTTTAGGCAAGATGAAAGcc > 2:1331927/1‑101 (MQ=21)
aCGCTTTCGGCGGCGGCGGGCCACGCCTGAGGCCGGGCAGGGGGGCGCTGCCCCCC.GTCC.TGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCg < 1:3722350/101‑1 (MQ=255)
tttCGGCGGCGGCGGGCCACGCCTGAGGCCGGGCAGGGGGGCGCTGCCCCCC.GTCC.TGCGGACTCCCTCCGGGGTATTTGAGGCAAGATGAAGCCCGATcc > 1:3850092/1‑101 (MQ=21)
ttCGGCGGCGGCGGGCCACGCCTGAGGCCGGGCAGGGGGGCGCTGCCCCCC.GTCC.TGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCGATCCg < 1:1968169/101‑1 (MQ=255)
gcggcggcggGCCACGCCTGAGGCCGGGCAGGGGGGCGCTGCCCCCC.GTCC.TGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCGATCCGGGCt < 2:941398/101‑1 (MQ=255)
cggcggcggGCCACGCCTGAGGCCGGGCAGGGGGGCGCTGCCCCCC.GTCC.TGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCGATCCGGGCtt < 1:2731068/101‑1 (MQ=255)
ggcggcggGCCACGCCTGAGGCCGGGCAGGGGGGCGCTGCCCCCC.GTCC.TGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCGATCCGGGCTTc < 2:2773287/101‑1 (MQ=255)
ggcggcggGCCACGCCTGAGGCCGGGCAGGGGGGCGCTGCCCCCC.GTCC.TGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCGATCCGGGCTTc > 2:2595712/1‑101 (MQ=255)
gcggcggGCCACGCCTGAGGCCGGGCAGGGGGGCGCTGCCCCCC.GTCC.TGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCGATCCGGGCTTCg < 2:1134490/101‑1 (MQ=255)
ggcggGCCACGCCTGAGGCCGGGCAGGGGGGCGCTGCCCCCC.GTCC.TGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGtt < 1:2047272/101‑1 (MQ=255)
gggggCCACGCCTGAGGCCGGGCAGGGGGGCGCTGCCCCCC.GTCC.TGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGttt < 1:3136909/99‑1 (MQ=255)
cggGCCACGCCTGAGGCCGGGCAGGGGGGCGCTGCCCCCC.GTCC.TGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGGTTc > 2:4038378/1‑101 (MQ=255)
gggCCACGCCTGAGGCCGGGCAGCGGGGCGCTGCCCCCC.GTCC.TGCGAACTCCCCACGGGATATTTGAGGCAAGATGAGAGCAGATCCGGGCTTCGTTGCa > 2:736359/1‑101 (MQ=18)
gCCACGCCTGAGGCCGGGCAGGGGGGCGCTGCCCCCC.GTCC.TGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATc < 2:2054554/101‑1 (MQ=255)
ccACGCCTGAGGCCGGGGAGGGGGGCGCTGCCCCCC.GTCC.TGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATCt < 1:1267872/101‑1 (MQ=255)
cACGCCTGAGGCCGGGCAGGGGGGCGCTGCCCCCC.GTCC.TGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATCtt < 2:173876/101‑1 (MQ=255)
cACGCCTGAGGCCGGGCAGGGGGGCGCTGCCCCCC.GTCC.TGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATCtt > 2:3922964/1‑101 (MQ=255)
cACGCCTGAGGCCGGGCAGGGGGGCGCTGCCCCCC.GTCC.TGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATCtt < 2:1778673/101‑1 (MQ=255)
cACGCCTGAGGCCGGGCAGGGGGGCGCTGCCCCCC.GTCC.TGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCGATCCGGGCCTCGTTTCATcct > 2:797111/1‑99 (MQ=255)
cACGCCTGAGGCCGGGCAGGGGGGCGCTGCCCCCC.GTCC.TGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCAGATCCGGGCTTCGTTTTACCtt > 2:59682/1‑101 (MQ=18)
aCGCCTGAGGCCGGGCAGGGGGGCGCTGCCCCCC.GTCC.TGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATCTTg < 1:1877662/101‑1 (MQ=255)
cGCCTGAGGCCGGGCAGGGGGGCGCTGCCCCCC.GTCC.TGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATCTTGc < 2:3170758/101‑1 (MQ=255)
gCCTGAGGCCGGGCAGGGGGGCGCTGCCCCCC.GTCC.TGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATCTTGcc > 2:3974588/1‑101 (MQ=255)
cTGAGGCCGGGCAGGGGGGCGCTGCCCCCC.GTCC.TGCGGACTCCCCCCGGGGTATTTGAGGTAAGATGAAAGCCGATCCGGGCTTCGTTTCATCTTGcccc > 1:3680842/1‑101 (MQ=21)
cTGAGGCCGGGCAGGGGGGCGCTGCCCCCC.GTCC.TGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATCTTGcccc < 1:2609731/101‑1 (MQ=255)
cTGAGGCCGGGCAGGGGGGCGCTGCCCCCC.GTCC.TGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATCTTGcccc < 1:719163/101‑1 (MQ=255)
tGAGGCCGGGCAGGGGGGCGCTGCCCCCC.GTCC.TGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATCTTGCCCCa < 1:599427/101‑1 (MQ=255)
gCCGGGCAGGGGGGCGCTGCCCCCC.GTCC.TGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATCTTGCCCCAAata < 2:2481959/101‑1 (MQ=255)
cGGGCAGGGGGGCGCTGCCCCCC.GTCC.TGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATCTTGCCCCAAATATc < 2:3175109/101‑1 (MQ=255)
ggacggggggCTCTGCCCCCC.GG.C.TTCG..CTCCCCCCGGGATATTTGCGGCAAGATGAA....G....GGGCATGATTTCATCTTGCCCGAAATATCCCAGGGGTG.AAtt > 1:1895554/5‑101 (MQ=2)
gacggggggCTCTGCCCCCC.GG.C.TTCG..CTCCCCCCGGGATATTTGCGGCAAGATGAA....G....GGGCATGATTTCATCTTGCCCGAAATATCCCAGGGGTG.AAttg > 1:3903003/4‑100 (MQ=2)
gCAGGGGGGCGCTGCCCCCC.GTCC.TGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATCTTGCCCCAAATATCCCg < 1:1391283/101‑1 (MQ=255)
cAGGGGGGCGCTGCCCCCC.GTCC.TGCGGACTCCCCCCGGGATATTTGAGGAAAGATGAAAGCCGATCCGGGCTTAGTTTCATCTTGCCCCAAATATCCCgg > 1:3553983/1‑101 (MQ=25)
acggggggCTCTGCCCCCC.GG.C.TTCG..CTCCCCCCGGGATATTTGCGGCAAGATGAA....G....GGGCATGATTTCATCTTGCCCGAAATATCCCAGGGGTG.AAttgg > 2:3465243/3‑99 (MQ=2)
cggggggCTCTGCCCCCC.GG.C.TTCG..CTCCCCCCGGGATATTTGCGGCAAGATGAA....G....GGGCATGATTTCATCTTGCCCGAAATATCCCAGGGGTG.AAttggc < 1:2878129/100‑4 (MQ=2)
aGGGGGGCGCTGCCCCCC.GTCC.TGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATCTTGCCCCAAATATCCCggg > 1:2153747/1‑101 (MQ=255)
aGGGGGGCGCTGCCCCCC.GTCC.TGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATCTTGCCCCAAATATCCCggg > 2:1951916/1‑101 (MQ=255)
ggggggCGCTGCCCCCC.GTCC.TGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATCTTGCCCCAAATATCCCgggg < 2:458048/101‑1 (MQ=255)
ggggCGCTGCCCCCC.GTCC.TGCGGACTCCCCCCGGGCTATTTGAGGCAATACGAAAGCCGATCCGGGCTTCGTTTCATCTTGCCCTAAATATCCCGGGGGt > 2:3000739/1‑101 (MQ=25)
ggCGCTGCCCCCC.GT.CTTGCGGCCGCCCCCCGGCATATTTGAGGCAGGATGAAAGCCGATCCGGGCTTCGTTTCATCTTGCCCCAAATATCCCGGGGGTG.a < 2:4257360/101‑1 (MQ=25)
gcccTGCCCCCC.GTCC.TGCGGGCCTCCCCCGGGATAATTGAGGGAAAATGAAAGCCGATCCGGGCTTCGTTTCATCTTGCCCCAAATATCCCGGGGGTG.aa < 2:2566367/98‑1 (MQ=25)
cgcTGCCCCCC.GTCC.TGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATCTTGCCCCAAATATCCCGGGGGTG.AAt > 2:127379/1‑101 (MQ=255)
cgcTGCCCCCC.GTCC.TGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATCTTGCCCCAAATATCCCGGGGGTG.AAt > 1:337882/1‑101 (MQ=255)
cTGCCCCCC.GTCC.TGCGGACTCCCCCCGGGATATTTTAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATCTTTCCCCAAATATCCCCGGGGGG.AAttt > 2:36233/1‑101 (MQ=25)
cTGCCCCCC.GTCC.TGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATCTTGCCCCAAATATCCCGGGGGTG.AAttt < 2:307592/101‑1 (MQ=255)
tGCCCCCC.GTCC.TGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCTTCTTGCCCCAAATATCCCGGGGGGG.AAtttt > 1:4268833/1‑101 (MQ=25)
tGCCCCCC.GTCC.TGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATCTTGCCCCAAATATCCCGGGGGTG.AAtttt > 2:1915128/1‑101 (MQ=255)
tGCCCCCC.GTCC.TGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATCTTGCCCCAAATATCCCGGGGGTG.AAtttt > 1:2809354/1‑101 (MQ=255)
tGCCCCCC.GTCC.TGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCGATCAGGACTTCGTTTCATCTTGCCCCAAATATCCCCGGGGTG.AAtttt > 2:4412183/1‑101 (MQ=25)
cgCCCCCC.GTCC.TGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATCTTGCCCCAAATATCCCGGGGGTG.AAtttt < 1:2284194/100‑1 (MQ=255)
gCCCCCC.GTCC.TGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATCTTGCCCCAAATATCCCGGGGGTG.AATTTTg > 2:3455892/1‑101 (MQ=255)
ccccc.GTCC.TGCGGACTCCCCCCGGGATATTTTAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTTATCTTGCCCCCAATATTCCGGGGGGGAAATTTTgg > 2:3130228/1‑101 (MQ=21)
cccc.GTCC.TGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATCTTGCCCCAAATATCCCGGGGGTG.AATTTTGgcg < 1:1370521/101‑1 (MQ=255)
ccc.GTCC.TGCGGACTCCCCCCGGGCTATTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATCTTGCCCCAAATATCCCGGGGGTG.AATTTTGgcgc > 2:3342972/1‑101 (MQ=255)
ccgtcc.TGCGGACTCCCCCCGGGATATTTTAGGCAAAATGAAAACCGAACCGGGGTTCGTTTCATCTTGCCCCCAAAATCCCCGGGGGG.AATTTTgtggcc > 2:1539672/6‑96 (MQ=18)
ccgtcc.TGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATCTTGCCCCAAATATCCCGGGGGTG.AATTTTGGCGCa < 2:667298/96‑1 (MQ=255)
cgtcc.TGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATCTTGCCCCAAATATCCCGGGGGTG.AATTTTGGCGCAg < 1:3467986/97‑1 (MQ=255)
cgtcc.TGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCGATACGGGCCTCGTTTCATTTTGCCCCAAATATCCCGGGGGGG.GATTTTGGAGCAg > 1:3947264/5‑101 (MQ=18)
tcc.TGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATCTTGCCCCAAATATCCCGGGGGTG.AATTTTGGCGCAGcc < 1:4379286/99‑1 (MQ=255)
tcc.TGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATCTTGCCCCAAATATCCCGGGGGTG.AATTTTGGCGCAGcc < 1:4015698/99‑1 (MQ=255)
cc.TGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATCTTGCCCCAAATATCCCGGGGGTG.AATTTTGGCGCAGCCa > 1:3461589/2‑101 (MQ=255)
cGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATCTTGCCCCAAATATCCCGGGGGTG.AATTTTGGCGCAGCCAAAag < 1:2162705/101‑1 (MQ=255)
ggACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATCTTGCCCCAAATATCCCGGGGGTG.AATTTTGGCGCAGCCAAAaga < 1:2020531/101‑1 (MQ=255)
tCCCCCCGGGATATTTGAGGCAAGATGAAAGCCGATCCGGTCTTCGTTTCATCTTGCCCCAAATATCCCGGGGGTG.AATTTTGGCGCAGCCAAAAGAgggg < 2:3680589/101‑1 (MQ=255)
tCCCCCCGGGATATTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATCTTGCCCCAAATATCCCGGGGGTG.AATTTTGGCGCAGCCAAAAGAgggg > 1:747322/1‑101 (MQ=255)
tCCCCCCGGGATATTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATCTTGCCCCAAATATCCCGGGGGTG.AATTTTGGCGCAGCCAAAAGAgggg > 2:4361890/1‑101 (MQ=255)
tCCCCCCGGGATATTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATCTTGCCCCAAATATCCCGGGGGTG.AATTTTGGCGCAGCCAAAAGAgggg > 2:2668008/1‑101 (MQ=255)
gccccccGGAATATTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATCTTGCCCCAAATATCCCGGGGGTG.AATTTTGGCGCAGCCAAAAGAgggg < 2:2826603/100‑1 (MQ=255)
cccccGGGATATTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATCTTGCCCCAAATATCCCGGGGGTG.AATTTTGGCGCAGCCAAAAGAGGGGGc > 1:951457/1‑101 (MQ=255)
ccccGGGATATTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATCTTGCCCCAAATATCCCGGGGGTG.AATTTTGGCGCAGCCAAAAGAGGGGGCa < 1:4364882/101‑1 (MQ=255)
cccGGGATATTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATCTTGCCCCAAATATCCCGGGGGTG.AATTTTGGCGCAGCCAAAAGAGGGGGCat > 1:1123477/1‑100 (MQ=255)
ccGGGATATTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATCTTGCCCCAAATATCCCGGGGGTG.AATTTTGGCGCAGCCAAAAGAGGGGGCAgc < 1:478951/101‑1 (MQ=255)
cGGGATATTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATCTTGCCCCAAATATCCCGGGGGTG.AATTTTGGCGCAGCCAAAAGAGGGGGCAgcg < 1:3640770/101‑1 (MQ=255)
cGGGATATTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATCTTGCCCCAAATATCCCGGGGGTG.AATTTTGGCGCAGCCAAAAGAGGGGGCAgcg > 2:1422484/1‑101 (MQ=255)
cGGGATATTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATCTTGCCCCAAATATCCCGGGGGTG.AATTTTGGCGCAGCCAAAAGAGGGGGCAccg < 2:2949293/101‑1 (MQ=255)
gggATATTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATCTTGCCCCAAATATCCCGGGGGTG.AATTTTGGCGCAGCCAAAAGAGGGGGCAgcgc > 2:1119944/1‑101 (MQ=255)
gATATTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATCTTGCCCCAAATATCCCGGGGGTG.AATTTTGGCGCAGCCAAAAGAGGGGGCAGCGccc > 2:2771542/1‑101 (MQ=255)
tatTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATCTTGCCCCAAATATCCCGGGGGTG.AATTTTGGCGCAGCCAAAAGAGGGGGCAGCGccccc < 2:3763654/101‑1 (MQ=255)
atTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATCTTGCCCCAAATATCCCGGGGGTG.AATTTTGGCGCAGCCAAAAGAGGGGGCAGCGCCCCCt > 1:1211740/1‑101 (MQ=255)
atTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATCTTGCCCCAAATATCCCGGGGGTG.AATTTTGGCGCAGCCAAAAGAGGGGGCAGCGCCCCCt > 2:201369/1‑101 (MQ=255)
atTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATCTTGCCCCAAATATCCCGGGGGTG.AATTTTGGCGCAGCCAAAAGAGGGGGCAGCGCCCCCt < 1:1560879/101‑1 (MQ=255)
atTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATCTTGCCCCAAATATCCCGGGGGTG.AATTTTGGCGCAGCCAAAAGAGGGGGCAGCGCCCCCt > 1:3175898/1‑101 (MQ=255)
atTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATCTTGCCCCAAATATCCCGGGGGTG.AATTTTGGCGCAGCCAAAAGAGGGGGCAGCGCCCCCt > 2:4278323/1‑101 (MQ=255)
tttGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATCTTGCCCCAAATATCCCGGGGGTG.AATTTTGGCGCAGCCAAAAGAGGGGGCAGCGCCCCCTa > 2:1853137/1‑101 (MQ=255)
tttGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATCTTGCCCCAAATATCCCGGGGGTG.AATTTTGGCGCAGCCAAAAGAGGGGGCAGCGCCCCCTa > 1:2401888/1‑101 (MQ=255)
ttGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATCTTGCCCCAAATATCCCGGGGGTG.AATTTTGGCGCAGCCAAAAGAGGGGGCAGCGCCCCCTAt < 2:1386528/101‑1 (MQ=255)
ttGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATCTTGCCCCAAATATCCCGGGGGTG.AATTTTGGCGCAGCCAAAAGAGGGGGCAGCGCCCCCTAt < 1:3309251/101‑1 (MQ=255)
tGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATCTTGCCCCAAATATCCCGGGGGTG.AATTTTGGCGCAGCCAAAAGAGGGGGCAGCGCCCCCTATc > 1:3586026/1‑101 (MQ=255)
tGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATCTTGCCCCAAATATCCCGGGGGTG.AATTTTGGCGCAGCCAAAAGAGGGGGCAGCGCCCCCCATc > 1:2845410/1‑101 (MQ=255)
aGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATCTTGCCCCAAATATCCCGGGGGTG.AATTTTGGCGCAGCCAAAAGAGGGGGCAGCGCCCCCTATccc > 1:3760642/1‑101 (MQ=255)
gCAAGATGAAAGCCGATCCGGGCTTCGTTTCATCTTGCCCCAAATATCCCGGGGGTG.AATTTTGGCGCAGCCAAAAGAGGGGGCAGCGCCCCCTATCCCcg < 2:2077529/101‑1 (MQ=255)
cAAGATGAAAGCCGATCCGGGCTTCGTTTCATCTTGCCCCAAATATCCCGGGGGTG.AATTTTGGCGCAGCCAAAAGAGGGGGCAGCGCCCCCTATCCCcgc > 2:1616172/1‑101 (MQ=255)
aGATGAAAGCCGATCCGGGCTTCGTTTCATCTTGCCCCAAATATCCCGGGGGTG.AATTTTGGCGCAGCCAAAAGAGGGGGCAGCGCCCCCTATCCCcgcgg > 1:150635/1‑101 (MQ=255)
gATGAAAGCCGATCCGGGCTTCGTTTCATCTTGCCCCAAATATCCCGGGGGTG.AATTTTGGCGCAGCCAAAAGAGGGGGCAGCGCCCCCTATCCCcgcggc < 1:769328/101‑1 (MQ=255)
tGAAAGCCGATCCGGGCTTCGTTTCATCTTGCCCCAAATATCCCGGGGGTG.AATTTTGGCGCAGCCAAAAGAGGGGGCAGCGCCCCCTATCCCcgcggcgc > 2:1599185/1‑101 (MQ=255)
gAAAGCCGATCCGGGCTTCGTTTCATCTTGCCCCAAATATCCCGGGGGTG.AATTTTGGCGCAGCCAAAAGAGGGGGCAGCGCCCCCTATCCCcgcggcgcg > 1:1472402/1‑101 (MQ=255)
aaGCCGATCCGGGCTTCGTTTCATCTTGCCCCAAATATCCCGGGGGTG.AATTTTGGCGCAGCCAAAAGAGGGGGCAGCGCCCCCTATCCCCgcggcgcggc < 1:1050148/101‑1 (MQ=255)
|
CGCACGCTTTCGGCGGCGGCGGGCCACGCCTGAGGCCGGGCAGGGGGGCGCTGCCCCCC.GT.C.TGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATCTTGCCCCAAATATCCCGGGGGTG.AATTTTGGCGCAGCCAAAAGAGGGGGCAGCGCCCCCTATCCCCGCGGCGCGGC > NC_014034/432365‑432562
Base quality scores:
ATCG
< 3 ≤
ATCG
< 18 ≤
ATCG
< 26 ≤
ATCG
< 33 ≤
ATCG
< 41 ≤
ATCG
|