Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_014034 1,734,917 +A 2.8% intergenic (‑170/+23) RCAP_rcc01603 ← / ← RCAP_rcc01604 hemolysin‑III family protein/hypothetical protein

Read alignment evidence...
  seq id position change freq score reads annotation genes product
*NC_0140341,734,9171.→A 2.8% 16.0 ‑3.4 ‑0.1214intergenic (‑170/+23)RCAP_rcc01603/RCAP_rcc01604hemolysin‑III family protein/hypothetical protein
Reads supporting (aligned to +/- strand):  new base (6/0):  ref base (110/98):  total (116/98)
Fisher's exact test strand distribution p-value = 3.23e-02
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 7.93e-01

Only 100 of 239 total aligned reads displayed.

GACGGGCCGGGCAGGGGGGCGCTG.CCCCCGTCCTGCGGACTCCCCCC.GGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGA.GCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGTTTTCGCTGATGAGCAAGCGCCCGTTCGGCAGGTCGTTTTCCTCGGT  >  NC_014034/1734818‑1735017
                                                                                                       |                                                                                                     
gACGGGCCGGGCAGGGGGGCGCTGCCCCCCGTCCTGCGGACTCCCCCC.GGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATccc                                                                                                        <  1:862633/101‑1 (MQ=255)
  cgggccgggcAGGGGGGCGCTGCCCCCCGTCCTGCGGACTCCCCCC.GGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.gg                                                                                                     >  2:3951608/1‑101 (MQ=255)
    ggccgggcAGGGGGGCGCTGCCCCCCGTCCTGCGGACTCCCCCC.GGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.gggg                                                                                                   <  2:4101275/101‑1 (MQ=255)
    ggccgggcAGGGGGGCGCTGCCCCCCGTCCTGCGGACTCCCCCC.GGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.gggg                                                                                                   <  1:2729597/101‑1 (MQ=255)
     tgacggacggggggCTCTG.CCCCCCGGCTTCG..CTCCCCCC.GGGATATTTGCGGCAAGATGAAGGGGCATGATTTCATCTTGCCCGAAATATCCCAGGGGTg                                                                                                 >  1:3088440/9‑101 (MQ=2)
     gccgggcAGGGGGGCGCTGCCCCCCGTCCTGCGGACTCCCCCC.GGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGt                                                                                                  >  1:531927/1‑101 (MQ=255)
      ccgggcAGGGGGGCGCTGCCCCCCGTCCTGCGGACTCCCCCC.TGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTg                                                                                                 <  2:3414477/101‑1 (MQ=255)
      ccgggcAGGGGGGCGCTGCCCCCCGTCCTGCGGACTCCCCCC.GGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTg                                                                                                 >  1:4062656/1‑101 (MQ=255)
      ccgggcAGGGGGGCGCTGCCCCCCGTCCTGCGGACTCCCCCC.AGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTg                                                                                                 <  2:3756712/101‑1 (MQ=255)
       cgggcAGGGGGGCGCTGCCCCCCGTCCTGCGGACTCCCCCC.GGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGc                                                                                                >  2:3917176/1‑101 (MQ=255)
       cgggcAGGGGGGCGCTGCCCCCCGTCCTGCGGACTCCCCCC.GGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGc                                                                                                <  1:2751702/101‑1 (MQ=255)
       cgggcAGGGGGGCGCTGCCCCCCGTCCTGCGGACTCCCCCC.GGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGc                                                                                                <  2:3818961/101‑1 (MQ=255)
       acggacggggggCTCTG.CCCCCCGGCTTCG..CTCCCCCC.GGGATATTTGCGGCAAGATGAAGGGGCATGATTTCATCTTGCCCGAAATATCCCAGGGGTgaa                                                                                               >  2:2963105/7‑99 (MQ=2)
        gggcAGGGGGGCGCTGCCCCCCGTCCTGCGGACTCCCCCC.GGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCg                                                                                               <  2:707371/101‑1 (MQ=255)
        gggcAGGGGGGCGCTGCCCCCCGTCCTGCGGACTCCCCCC.GGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGAGTGCg                                                                                               >  2:137446/1‑101 (MQ=255)
        cggacggggggCTCTG.CCCCCCGGCTTCG..CTCCCCCC.GGGATATTTGCGGCAAGATGAAGGGGCATGATTTCATCTTGCCCGAAATATCCCAGGGGTgaat                                                                                              >  2:1680161/6‑98 (MQ=2)
           cAGGGGGGCGCTGCCCCCCGTCCTGCGGACTCCCCCCGGGGATTTTTTTGCCAAGAGGAAATGGG.GCCCTTATTTTTCCCAAAAAATTCCC.GGGGGGGggg                                                                                             >  1:1651469/1‑101 (MQ=2)
            aGGGGGGCGCTGCCCCCCGTCCTGCGGACTCCCCCC.GGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGc                                                                                           <  2:3302839/101‑1 (MQ=255)
            aGGGGGGCGCTGCCCCCCGTCCTGCGGACTCCCCCC.GGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGc                                                                                           >  2:636941/1‑101 (MQ=255)
             ggggggCGCTGCCCCCCGTCCTGCGGACTCCCCCC.GGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCa                                                                                          <  2:4044034/101‑1 (MQ=255)
              gggggCGCTGCCCCCCGTCCTGCGGACTCCCCCC.GGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCag                                                                                         <  2:718689/101‑1 (MQ=255)
               ggggCGCTGCCCCCCGTCCTGCGGACTCCCCCC.GGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCaga                                                                                        <  2:600834/101‑1 (MQ=255)
                    gctgccccccGTCCTGCGGACTCCCCCC.GGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGA.Gcccc                                                                                  <  1:4004288/96‑1 (MQ=255)
                        ccccccGTCCTGCGGACTCCCCCC.GGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGA.GCCCCGCTc                                                                              <  2:2059104/100‑1 (MQ=255)
                        ccccccGTCCTGCGGACTCCCCCC.GGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGGGCGGGGCAGA.GCCCCGCTc                                                                              >  2:3152/2‑101 (MQ=255)
                         cccccGTCCTGCGGACTCCCCCC.GGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGA.GCCCCGCTCa                                                                             <  1:3400990/101‑1 (MQ=255)
                         cccccGTCCTGCGGACTCCCCCC.GGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGA.GCCCCGCTCa                                                                             >  2:2585613/1‑101 (MQ=255)
                          ccccGTCCTGCGGACTCCCCCC.GGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGCCCTAAATATCCC.CGGGTGCGGGGCAGA.GCCCCGCTCaa                                                                            >  1:1832988/1‑101 (MQ=255)
                          ccccGTCCTGCGGACTCCCCCC.GGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGA.GCCCCGCTCaa                                                                            <  1:4134519/101‑1 (MQ=255)
                              gTCCTGCGGACTCCCCCC.GGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTTCCCTAAATACCCC.GGGGTGGGGGGGGGACGCCCCGC.CAAccca                                                                        >  1:3849065/1‑99 (MQ=17)
                              gTCCTGCGGACTCCCCCC.GGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGA.GCCCCGCTCAACCGa                                                                        >  1:2403462/1‑101 (MQ=255)
                               tCCTGCGGACTCCCCCC.GGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGA.GCCCCGCTCAACCGaa                                                                       <  1:2323837/101‑1 (MQ=255)
                               tCCTGCGGACTCCCCCC.GGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGGGCGGGGCAGA.GCCCCGCTCAACCGaa                                                                       >  1:3595324/1‑101 (MQ=255)
                                ccTGCGGACTCCCCCC.GGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGA.GCCCCGCTCAACCGAAg                                                                      >  2:1896954/1‑101 (MQ=255)
                                ccTGCGGACTCCCCCC.GGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGAGGGGCAGG.GCGCCGGTCactcagag                                                                      >  2:4107291/1‑94 (MQ=18)
                                  tGCGGACTCCCCCC.GGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGA.GCCCCGCTCAAccagatcg                                                                    >  1:1442080/1‑95 (MQ=255)
                                   gCGGACTCCCCCC.GGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGA.GCCCCGCTCAACCGAAGATg                                                                   <  1:4077270/101‑1 (MQ=255)
                                   gCGGACTCCCCCC.GGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGA.GCCCCGCTCAACCGAAGATg                                                                   <  2:275859/101‑1 (MQ=255)
                                    cGGACTCCCCCC.GGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGA.GCCCCGCTCAACCGAAGATGa                                                                  >  1:4300716/1‑101 (MQ=255)
                                     ggACTCCCCCC.GGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGA.GCCCCGCTCAACCGAAGATGAc                                                                 <  1:3349595/101‑1 (MQ=255)
                                        gtCCGCCC.GGGATATTGATGGCAAGATGAAACTGC.GGCCTTCATCTTGCCATGAATATCCC.GGGGTGCGGGGCAGA.GCCCCGCTCAACCGAAGATGACAAg                                                              <  2:3521351/100‑1 (MQ=255)
                                         tCCCCCC.GGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGA.GCCCCGCTCAACCGAAGATGACAAGa                                                             >  1:4176925/1‑101 (MQ=255)
                                          cccccc.GGGATATTTATGGCAAGATGAAACTCC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGA.GCCCCGCTCAACCGAAGATGACAAGAt                                                            <  1:3731324/101‑1 (MQ=255)
                                           ccccc.GGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGA.GCCCCGCTCAACCGAAGATGACAAGATc                                                           >  2:4140493/1‑101 (MQ=255)
                                            cccc.GGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGA.GCCCCGCTCAACCGAAGATGACAAGATcc                                                          <  1:2945070/101‑1 (MQ=255)
                                            cccc.GGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGA.GCCCCGCTCAACCGAAGATGACAAGATcc                                                          <  1:2176442/101‑1 (MQ=255)
                                            cccc.GGGATATTTATGGCAAGATGAAACTGC.GGACTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGA.GCCCCGCTCAACCGAAGATGACAAGATcc                                                          <  1:2243514/101‑1 (MQ=255)
                                             ccc.GGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGA.GCCCCGCTCAACCGAAGATGACAAGATCcg                                                         >  2:1842159/1‑101 (MQ=255)
                                             ccc.GGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGA.GCCCCGCTCAACCGAAGATGACAAGATCcg                                                         <  1:2526812/101‑1 (MQ=255)
                                              cc.GGGATATTTATGGCGAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCG.GGGGTGCGGGGCAGA.GCCCCGCTCAACCGAAGATGACAAGATCcgc                                                        <  1:1322551/101‑1 (MQ=255)
                                              cc.GGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGA.GCCCCGCTCAACCGAAGATGACAAGATCcgc                                                        >  1:2040443/1‑101 (MQ=255)
                                               c.GGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGA.GCCCCGCTCAACCGAAGATGACAAGATCcgcg                                                       <  1:2884614/101‑1 (MQ=255)
                                                    atatTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGA.GCCCCGCTCAACCGAAGATGACAAGATCCGCGGccc                                                   >  2:2428676/1‑101 (MQ=255)
                                                      atTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGA.GCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCgg                                                 >  1:714448/1‑101 (MQ=255)
                                                        ttATGGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGA.GCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGtt                                               >  1:2657265/1‑101 (MQ=255)
                                                           tGGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGA.GCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGTTTTc                                            <  1:3972216/101‑1 (MQ=255)
                                                           tGGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGA.GCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGTTTTc                                            <  2:2745488/101‑1 (MQ=255)
                                                            ggCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGA.GCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGTTTTCg                                           <  1:636576/101‑1 (MQ=255)
                                                            ggCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGA.GCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGTTTTCg                                           >  1:1147208/1‑101 (MQ=255)
                                                               aaGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGA.GCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGTTTTCGCtg                                        >  1:1858252/1‑101 (MQ=255)
                                                               aaGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGA.GCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGTTTTCGCtg                                        >  1:2488769/1‑101 (MQ=255)
                                                               aaGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGA.GCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGTTTTCGCtg                                        <  2:772397/101‑1 (MQ=255)
                                                                aGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGA.GCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGTTTTCGCtga                                       <  1:1917885/101‑1 (MQ=255)
                                                                 gATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGA.GCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGTTTTCGCtgat                                      >  1:2365201/1‑101 (MQ=255)
                                                                 gATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGA.GCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGTTTTCGCtgat                                      >  2:569827/1‑101 (MQ=255)
                                                                  aTGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGA.GCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGTTTTCGCtgatg                                     >  2:3849105/1‑101 (MQ=255)
                                                                  aTGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGA.GCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGTTTTCGCtgatg                                     <  2:916307/101‑1 (MQ=255)
                                                                   tGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGA.GCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGTTTTCGCtgatga                                    >  2:2381737/1‑101 (MQ=255)
                                                                    gAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGA.GCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGTTTTCGCTGATGAg                                   >  2:3442067/1‑101 (MQ=255)
                                                                    gAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGA.GCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGTTTTCGCTGATGAg                                   <  2:1114567/101‑1 (MQ=255)
                                                                     aaaCTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGA.GCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGTTTTCGCTGATGAGc                                  >  1:3483368/1‑101 (MQ=255)
                                                                      aaCTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGA.GCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGTTTTCGCTGATGAGCa                                 <  1:581625/101‑1 (MQ=255)
                                                                       tcTGC.GGCCTTCGTCTTGCCATAAATATCCC.GGGGTGCGGGGCAGA.GCCCCGTTCAACCGAAGATGACAAGATCCGCGGCCCGGTTTTCGCTGATGAGCaa                                <  1:4108919/100‑1 (MQ=255)
                                                                          gC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGA.GCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGTTTTCGCTGATGAGCAAgcg                             >  1:2774735/1‑101 (MQ=255)
                                                                          gC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGA.GCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGTTTTCGCTGATGAGCAAgcg                             <  1:3518360/101‑1 (MQ=255)
                                                                              gCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGA.GCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGTTTTCGCTGATGAGCAAGCGccc                          >  2:3394169/1‑101 (MQ=255)
                                                                                cTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGA.GCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGTTTTCGCTGATGAGCAAGCGCCCGt                        >  1:1241489/1‑101 (MQ=255)
                                                                                 ttCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGA.GCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGTTTTCGCTGATGAGCAAGCGCCCGtt                       <  2:3551242/101‑1 (MQ=255)
                                                                                 ttCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGA.GCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGTTTTCGCTGATGAGCAAGCGCCCGtt                       >  2:2566387/1‑101 (MQ=255)
                                                                                   cATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGA.GCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGTTTTCGCTGTTGAGCAAGCCCCCGTTCg                     >  2:1522766/1‑101 (MQ=255)
                                                                                   cATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGA.GCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGTTTTCGCTGATGAGCAAGCGCCCGTTCg                     >  2:142545/1‑101 (MQ=255)
                                                                                   cATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGA.GCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGTTTTCGCTGATGAGCAAGCGCCCGTTCg                     >  1:199752/1‑101 (MQ=255)
                                                                                   cATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGA.GCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGTTTTCGCTGATGAGCAAGCGCCCGTTCg                     >  2:4235463/1‑101 (MQ=255)
                                                                                    aTCTTGCCATAAATATTCC.GGGGTGCGGGGCAGA.GCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGTTTTCGCTGATGAGCAAGCGCCCGTTCgg                    <  2:1772320/101‑1 (MQ=255)
                                                                                    aTCTTGCCATAAATATCCC.GGGGTGCGGGGCAGA.GCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGTTTTCGCTGATGAGCAAGCGCCCGTTCgg                    >  1:4349801/1‑101 (MQ=255)
                                                                                     tCTTGCCATAAATATCCC.GGGGTGCGGGGCAGA.GCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGTTTTCGCTGATGAGCAAGCGCCCGTTCGGc                   >  2:1977607/1‑101 (MQ=255)
                                                                                      cTTGCCATAAATATCCC.GGGGTGCGGGGCAGA.GCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGTTTTCGCTGATGAGCAAGCGCCCGTTCGGCa                  >  1:357012/1‑101 (MQ=255)
                                                                                        tGCCATAAATATCCC.GGGGTGCGGGGCAGA.GCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGTTTTCGCTGATGAGCAAGCGCCCGTTCGGCAgg                >  1:3169663/1‑101 (MQ=255)
                                                                                         gCCATAAATATCCC.GGGGTGCGGGGCAGA.GCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGTTTTCGCTGATGAGCAAGCGCCCGTTCGGCAGGt               >  1:3050678/1‑101 (MQ=255)
                                                                                         gCCATAAATATCCC.GGGGTGCGGGGCAGA.GCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGTTTTCGCTGATGAGCAAGCGCCCGTTCGGCAGGt               <  1:137467/101‑1 (MQ=255)
                                                                                             tAAATATCCC.GGGGTGCGGGGCAGA.GCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGTTTTCGCTGATGAGCAAGCGCCCGTTCGGCAGGTCGtt           >  1:1695849/1‑101 (MQ=255)
                                                                                              aaaTATCCC.GGGGTGCGGGGCAGA.GCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGTTTTCGCTGATGAGCAAGCGCCCGTTCGGCAGGTCGttt          <  1:3933165/101‑1 (MQ=255)
                                                                                               aaTATCCC.GGGGTGCGGGGCAGA.GCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGTTTTCGCTGATGAGCAAGCGCCCGTTCGGCAGGTCGtttt         >  1:3513227/1‑101 (MQ=255)
                                                                                               aaTATCCC.GGGGTGCGGGGCAGA.GCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGTTTTCGCTGATGAGCAAGCGCCCGTTCGGCAGGTCGtttt         >  1:10211/1‑101 (MQ=255)
                                                                                                atatCCC.GGGGTGCGGGGCAGA.GCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGTTTTCGCTGATGAGCAAGCGCCCGTTCGGCAGGTCGTTTTc        >  2:2481475/1‑101 (MQ=255)
                                                                                                 tatCCC.GGGGTGCGGGGCAGA.GCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGTTTTCGCTGATGAGCAAGCGCCCGTTCGGCAGGTCGTTTTcc       >  2:1644484/1‑101 (MQ=255)
                                                                                                  atCCC.GGGGTGCGGGGCAGA.GCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGTTTTCGCTGATGAGCAAGCGCCCGTTCGGCAGGTCGTTTTCCt      >  1:3785802/1‑101 (MQ=255)
                                                                                                  atCCC.GGGGTGCGGGGCAGA.GCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGTTTTCGCTGATGAGCAAGCGCCCGTTCGGCAGGTCGTTTTCCt      <  2:3595076/101‑1 (MQ=255)
                                                                                                   tCCC.GGGGTGCGGGGCAGA.GCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGTTTTCGCTGATGAGCAAGCGCCCGTTCGGCAGGTCGTTTTCCTc     >  2:1766103/1‑101 (MQ=255)
                                                                                                    ccc.GGGGTGCGGGGCAGA.GCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGTTTTCGCTGATGAGCAAGCGCCCGTTCGGCAGGTCGTTTTCCTCg    <  2:2187027/101‑1 (MQ=255)
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GACGGGCCGGGCAGGGGGGCGCTG.CCCCCGTCCTGCGGACTCCCCCC.GGGATATTTATGGCAAGATGAAACTGC.GGCCTTCATCTTGCCATAAATATCCC.GGGGTGCGGGGCAGA.GCCCCGCTCAACCGAAGATGACAAGATCCGCGGCCCGGTTTTCGCTGATGAGCAAGCGCCCGTTCGGCAGGTCGTTTTCCTCGGT  >  NC_014034/1734818‑1735017

Base quality scores:  ATCG  < 3 ≤  ATCG  < 20 ≤  ATCG  < 29 ≤  ATCG  < 34 ≤  ATCG  < 40 ≤  ATCG