| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 568,801 | +C | 2.4% | intergenic (‑97/+69) | RCAP_rcc00530 ← / ← carB | hypothetical protein/carbamoyl‑phosphate synthase large subunit |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 568,801 | 1 | .→C | 2.4% | 2.9 0.0 ‑0.8 | 158 | intergenic (‑97/+69) | RCAP_rcc00530/carB | hypothetical protein/carbamoyl‑phosphate synthase large subunit |
| Reads supporting (aligned to +/- strand): new base (2/1): ref base (97/57): total (100/58) | ||||||||||
| Fisher's exact test strand distribution p-value = 1.00e+00 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 1.46e-01 | ||||||||||
Only 100 of 210 total aligned reads displayed.
TCATTCCTGCCTCCAGTTTCTGTATGTGAACCGGGGCTTACGCCTGTGGCTGCGGTGGGGCAATGACCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCGAC.GGGAGGGCAGGGCTGGTTTCGGGCGGCAAGGCGCCCGCGGCGCGGCCGTGCCTGCTTACGCCTGCAGCGGCCGGACCGAGATTTCG > NC_014034/568701‑568900
|
tCATTCCTGCCTCCAGTTTCTGTATGTGAACCGGGGCTTACGCCTGTGGCTGCGGTGGGGCAATGACCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCTg > 2:2589850/1‑101 (MQ=255)
aTTCCTGCCTCCAGTTTCTGTATGTGAACCGGGGCTTACGCCTGTGGCTGCGGTGGGGCAATGACCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCTG.cc > 1:3324516/1‑101 (MQ=255)
ttCCTGCCTCCAGTTTCTGTATGTGAACCGGGGCTTACGCCTGTGGCTGCGGTGGGGCAATGACCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCGG.cca > 1:4284468/1‑100 (MQ=255)
tCCTGCCTCCAGTTTCTGTATGTGAACCGGGGCTTACGCCTGTGGCTGCGGTGGGGCAATGACCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCTG.cccc > 1:4395034/1‑101 (MQ=255)
tCCTGCCTCCAGTTTCTGTATGTGAACCGGGGCTTACGCCTGTGGCTGCGGTGGGGCAATGACCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCTG.cccc < 2:3376824/101‑1 (MQ=255)
tGCCTCCAGTTTCTGTATGTGAACCGGGGCTTACGCCTGTGGCTGCGGTGGGGCAATGACCCGCACGGGCTTGTGAAGGCGCTGCGGGATCCTG.ccccccc > 1:833914/1‑101 (MQ=255)
cTCCAGTTTCTGTATGTGAACCGGGGCTTACGCCTGTGGCTGCGGTGGGGCAATGACCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCTG.ccccccc.ccc < 1:2607861/101‑1 (MQ=255)
cTCCAGTTTCTGTATGTGAACCGGGGCTTACGCCTGTGGCTGCGGTGGGGCAATGACCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCTG.ccccccc.ccc < 1:2158906/101‑1 (MQ=255)
cTCCAGTTTCTGGATGTGAACCGGGGCTTACGCCTGTGGCTGCGGTGGGACAATGACCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCTG.ccccccc.ccc < 2:1597829/101‑1 (MQ=255)
tCCAGTTTCTGTATGTGAACCGGGGCTTACGCCTGTGGCTGCGGTGGGGCAATGACCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCg > 1:646413/1‑101 (MQ=255)
tCCAGTTTCTGTATGTGAACCGGGGCTTACGCCTGTGGCTGCGGTGGGGCAATGACCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCg > 1:3495684/1‑101 (MQ=255)
cggTTTCGGTAGGGGAACCGGGGCTTACGCCGGTGGCGGGGGGGGGGCAATGACCCGCAGGGGTTTGTGAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCGAc < 2:1107040/99‑1 (MQ=255)
aGTTTCTGTATGTGAACCGGGGCTTACGCCTGTGGCTGCGGTGGGGCAATGACCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCTG.ccccccc.ccccccc > 1:885569/1‑97 (MQ=255)
aGTTTCTGTATGTGAACCGGGGCTTACGCCTGTGGCTGCGGTGGGGCAATGACCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCGAC.g > 1:2745345/1‑101 (MQ=255)
gTTTCTGTATGTGAACCGGGGCTTACGCCTGTGGCTGCGGTGGGGCAACGCCCCGCACGGGCTTGTGAAAGGGCTGCGGCATCCTG.CCCCCCC.CCCGAC.gg < 1:2509678/101‑1 (MQ=255)
ttCTGTATGTGAACCGGGGCTTAGGCCTGTGGCTGCGGTGGGGCAATGCCCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCGAC.GGGa < 2:1866102/101‑1 (MQ=255)
tCTGTATGTGAACCGGGGCTTACGCCTGTGGCTGCGGTGGGGCAATGACCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCGAC.GGGag < 1:3157617/101‑1 (MQ=255)
tCTGTATGTGAACCGGGGCTTACGCCTGTGGCTGCGGTGGGGCAATGACCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCGAC.GGGag > 2:2610708/1‑101 (MQ=255)
cTGTATGTGAACCGGGGCTTACGCCTGTGGCTGCGGTGGGGCAATGACCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCGAC.GGGagg < 2:295424/101‑1 (MQ=255)
tGTATGTGATCCGGGGCTTACGCCTGTGGCTGCGGTGGGGCAATGACCCGCACGGGTTTGTGAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCGAC.GGGaggg < 2:3449288/101‑1 (MQ=255)
tGTATGTGAACCGGGGCTTACGCCTGTGGCTGCGGTGGGGCAATGACCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCCGC.GGGgggg > 1:2715977/1‑101 (MQ=255)
gTATGTGAACCGGGGCTTACGCCTGTGGCTGCGGTGGGGCAATGACCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCGAC.GGGagggc > 2:2498241/1‑101 (MQ=255)
gTATGTGAACCGGGGCTTACGCCTGGGGCTGCGGTGGGGCAATGACCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCGAC.GGGagggc < 1:3172937/101‑1 (MQ=255)
aTGTGAACCGGGGCTTACGCCTGTGGCTGCGGTGGGGCAATGACCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCGAC.GGGagggcag > 2:2517825/1‑101 (MQ=255)
tgtgAACCGGGGCTTACGCCTGTGGCTGCGGTGGGGCAATGACCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCGAC.GGGagggcagg < 2:4379277/101‑1 (MQ=255)
gtgAACCGGGGCTTACGCCTGTGGCTGCGGTGGGGCAATGACCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCCAC.GGGagggcaggg > 2:1925404/1‑101 (MQ=255)
gAACCGGGGCTTACGCCTGTGGCTGCGGTGGGGCAATGACCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCCAC.GGGGGGGCCGGGCt > 2:897835/1‑101 (MQ=255)
aaCCGGGGCTTACGCCTGTGGCTGCGGTGGGGCAATGACCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCGAC.GGGAGGGCAGGGCTg < 2:3324284/101‑1 (MQ=255)
aCCGGGGCTTACGCCTGTGGCTGCGGTGGGGCAATGACCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCGAC.GGGAGGGCAGGGCTgg > 1:631207/1‑101 (MQ=255)
ccGGGGCTTACGCCTGTGGCTGCGGTGGGGCAATGACCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCGAC.GGGAGGGCAGGGCTGGt < 2:2633815/101‑1 (MQ=255)
cGGGGCTTACGCCTGTGGCTGCGGTGGGGCAATGACCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCCAC.GGGAGGGCGGGGCTGGtt > 2:1333305/1‑101 (MQ=255)
ggggCTTACGCCTGTGGCTGCGGTGGGGCAATGACCCGCCCGGGCTTGTGAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCGAC.GGGAGGGCAGGGCTGGttt < 1:695294/101‑1 (MQ=255)
ggggCTTACGCCTGTGGCTGCGGTGGGGCAATGACCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCTG..CCCCCC.CCCGAC.GGGGGGGCAGGGCTGGTTTc > 1:2971357/1‑101 (MQ=255)
gggCTTACGCCTGTGGCTGGGGTGGGGCAATGCCCCGCACGGGCTTGTGAAGGGGCTGCGGCATCCTG.CCCCCCC.CCCGAC.GGGAGGGCAGGGCTGGTTTc < 1:368914/101‑1 (MQ=255)
ggCTTACGCCGGGGGCTGCGGTGGGGCAATGCCCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCGAC.GGGAGGGCAGGGCTGGTTTCg < 1:1296394/101‑1 (MQ=255)
gCTTACGCCTGTGGCTGCGGTGGGGCAATGCCCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCGAC.GGGAGGGCAGGGCTGGTTTCgg < 2:2003737/101‑1 (MQ=255)
cTTACGCCTGTGGCTGCGGTGGGGCAATGGCCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCCGC.GGGGGGGGCGGGGTGGTTTTggg > 2:3032459/1‑101 (MQ=255)
cTTACGCCTGTGGCTGCGGTGGGGCAATGACCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCGAC.GGGGGGGCAGGGCTGGTTTCggg > 1:2124526/1‑101 (MQ=255)
ttgcGCCTGTGGCTGCGGTGGGGCAATGACCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCGAC.GGGAGGGCAGGGCTGGTTTCgggg > 1:2559805/4‑100 (MQ=255)
ttACGCCTGTGGCTGCGGTGGGGCAATGACCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCGAC.GGGGGGGCAGGGCTGGTTTCgggg > 2:309962/1‑100 (MQ=255)
aCGCCTGTGGGTGCGGTGGGGCAATGACCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCTG.CCCCCAC.CCCGAC.GGGGGGGCAGGGCTGGTATCGggcgg > 1:3851435/1‑101 (MQ=255)
aCGACTGTGGCTGCGGTGGGGCAATGACCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCGAC.GGGAGGGCAGGGCTGGGTTCGggcgg > 2:3773899/1‑101 (MQ=255)
gCCTGTGGCTGCGGTGGGGCAATGACCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCGAC.GGGGGGGCAGGGCTGGGTTCGggggggc > 2:2403236/1‑99 (MQ=255)
gCCTGTGGCTGCAGTGGGGCAATGACCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCGAC.GGGAGGGCAGGGCTGGTTTCGGGCGGCa > 2:2228951/1‑101 (MQ=255)
ccTGTGGCTGCGGTGGGGCAATGACCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCGAC.GGGAGGGCAGGGCTGGTTTCGGGCGGCaa < 1:1802348/101‑1 (MQ=255)
ccTGTGGCTGCGGTGGGGCAATGACCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCGAC.GGGAGGGCAGGGCTGGTTTCGGGCGGCaa > 2:1175886/1‑101 (MQ=255)
cTGTGGCTGCGGTGGGGCAATGACCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCGAC.GGGAGGGCAGGGCTGGTTTCGGGCGGCAAg > 1:4132813/1‑101 (MQ=255)
cTGTGGCTGCGGTGGGGCAATGACCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCGAC.GGGAGGGCAGGGCTGGGTTCGGGCGGCAAg > 2:382021/1‑101 (MQ=255)
cTGTGGCTGCGGGGGGGCAATGACCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCGAC.GGGAGGGCAGGGCTGGTTTCGGGCGGCAAg < 1:1697573/101‑1 (MQ=255)
tgtgGCTGCGGTGGGGCAATGACCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCGAC.GGGGGGGCAGGGCTGGTTTCGGGGGGGAAgg > 2:4188636/1‑101 (MQ=255)
tgtgGCTGCGGTGGGCCAAAAACCCGCACGGGATTGTGAAGGCGCTGCGGCGTCCTG.CCCCCCC.CCCGAC.GGGAGGGCAGGGCTGGTTTCGGGCGGCAAgg < 2:1004147/101‑1 (MQ=255)
gtgGCTGCGGTGGGGCAATGACCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCGAC.GGGAGGGCGGGGCTGGTTTCGGGCGGCAAGgc < 1:1881979/101‑1 (MQ=255)
gtgGCTGCGGTGGGGCAATGACCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCCCCGGGGGGGGCGGGGCGGGTTTCGGGGGGCAAgg > 1:971110/1‑101 (MQ=255)
gtgggggggggCAATGCCCCGCCGGGGCTTGTGAAGGCGCGGCGGCATCCTG.CCCCCCC.CCCGAC.GGGAGGGCAGGGCTGGTTTCGGGCGGCAAGGCGccc < 1:1640363/94‑1 (MQ=255)
ggggCAATGACCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCCCC.CGGGGGGCCGGGGCGGGTTCTGGGGGCCAGGGGCCcccgggcg > 2:3622663/1‑98 (MQ=255)
ggggCAATGACCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCTG..CCCCCC.CCCGAC.GGGAGGGCAGGGCTGGTTTCGGGCGGCAAGGCGCCcccggcgcg > 1:2069731/1‑101 (MQ=255)
gggCAATGACCCGCACGGGCTGGTGAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCGAC.GGGAGGGCAGGGCTGGTTTCGGGCGGCAAGGCGCCcgcggcgcg < 1:1607399/101‑1 (MQ=255)
gcacgtccccGCAGGGGTTTTTGACGGCGCTGCTGCCTCCGC.CCCCCCC.CCCGAC.GGGAGGGCAGGGCTGGTTTCGGGCGGCAAGGCGCCCgcggcgcggc < 2:833950/94‑1 (MQ=255)
aaTGACCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCTG.CCCCCCCACCCGAC.GGGGGGGCGGGGCTGGTTTCGGGGGGCAGGGCGCCCGCGGCGCGCcc > 2:518569/1‑101 (MQ=255)
aaTGACCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCGAC.GGGGGGGCAGGGCTGGTTTCGGGCGGCAAGGAGCCCGCGGCGGGGGCg > 1:402481/1‑101 (MQ=255)
aTGACCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCGAC.GGGAGGGCAGGGCTGGTTTCGGGCGGCCAGGGGCCCGCGGCGCGGCCGt > 2:335612/1‑101 (MQ=255)
tgccccGCACGGGCTTGTGAAGGCGCTGCGGCATCCTG..CCCCCC.CCCGAC.GGGAGGGCAGGGCTGGTTTCGGGCGGCAAGGCGCCCGCGGCGCGGCCGTGc < 1:1611602/98‑1 (MQ=255)
tGACCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCGAC.GGGAGGGCAGGGCTGGTTTCGGGCGGCAAGGCGCCCGCGGCGCGGCCggg > 1:3365984/1‑99 (MQ=255)
gACCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCTGCCCCCCCC.CCCGAC.GGGAGGGCAGGGCTGGTTTCGGGCGGCAAGGCGCCCCCGGCGCGGGCggg > 2:1791997/1‑99 (MQ=255)
gACCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCTG.CCACCCC.CCCGCC.GGGTGGGCGGGGCTGTGTTGGGGCGGCAAAGCTCCCGCGGCGCGGCAGTGc > 2:1449927/1‑101 (MQ=255)
gACCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCTG..CCCCCC.CCCGAC.GGGAGGGCAGGGCTGGGTTCGGGCGGCAAGGCGCCCGCGGCGCGGCCggggc > 1:3024952/1‑97 (MQ=255)
gCACGGGCTTGTGAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCGAC.GGGAGGGCAGGGCTGGTTTCGGGCGGCAAGGCGCCCGCGGCGCGGCCGGGCCTGCt > 2:3225148/1‑101 (MQ=255)
gCACGGGCTTGTGAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCGAC.GGGAGGGCAGGGCTGGTTTCGGGCGGCAAGGCGCCCCCGGCGCCGCCGTGCCTGCt > 2:919691/1‑101 (MQ=255)
cACGGGCTTGTGAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCGAC.GGGAGGGCAGGGCTGGTTTCGGGGGGCAAGGCGCCCGCGGCGCGGCCGGGCCTGCtt > 1:251311/1‑101 (MQ=255)
cACGGGCTTGTGAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCGAC.GGGAGGGCAGGGCTGGTTTCGGGCGGCAAGGCGCCCGCGGCGCGGCCGTGCCTGCtt < 1:1927969/101‑1 (MQ=255)
gcGGGCTTGTGAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCGAC.GGGAGGGCAGGGCTGGTTTCGGGCGGCAAGGCGCCCGCGGCGCGGCCGTGCCTGCTTa < 2:646711/100‑1 (MQ=255)
cGGGCTTGTGAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCGAC.GGGGGGGCAGGGCTGGGTTCGGGGGGCAAGGCGCCCCCGGGGCGGCCGGGCCCGCttcc > 1:3151154/1‑99 (MQ=255)
ggCTTGTGAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCGAC.GGGAGGGCAGGGCTGGTTTCGGGCGGCAAGGCGCCCGCGGGGCGGCCGCGCCCGCTCAccc > 1:1065320/1‑99 (MQ=255)
ttGTGAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCCAC.GGGGGGGCAGGGCTGGTTTCGGGCGGGAAGGGGCCCGCGGCGCGGCCGGGCCCGCTTACCcccc > 1:4197571/1‑99 (MQ=255)
tgtgAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCGAC.GGGAGGGCAGGGCTGGTTTCGGGCGGCAAGGCGCCCGCGGCGCGGCCGTGCCTGCTTACGCCTGc < 2:2818407/101‑1 (MQ=255)
tgggagggCCCTGGGGCATCCTG.CCCCCCC.CCCGAC.GGGAGGGCAGGGCTGGTTTCGGGCGGCAAGGCGCCCGCGGCGCGGCCGTGCCTGCTTACGCCTGc < 2:1539984/95‑1 (MQ=255)
gtgAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCGAC.GGGAGGGCAGGGCTGGTTTCGGGCGGCAAGGCGCCCGCGGCGCGGCCGTGCCTGCTTACGCCTGCa < 2:456747/101‑1 (MQ=255)
tgAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCGAC.GGGAGGGCAGGGCTGGTTTCGGGCGGCAAGGCGCCCGCGGCGCGGCCGTGCCTGCTTACGCCTGCAg < 1:3225377/101‑1 (MQ=255)
tgAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCCAC.GGGAGGGCCGGGCTGGTTTCGGGCGGCAAGGCGCCCGCGGCGCGGGCGGGCCTGCTTACGCCTGccg > 2:2879399/1‑99 (MQ=255)
gAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCGCC.GGGGGGGCAGGGCTGGGTTCGGGGGGCAAGGCGCCCGCGGCGCGGCCGGGCCTGCTTACGCCTGCCGc > 1:3952647/1‑101 (MQ=255)
aaGGCGCTGCGGCATCCTGACCCCCCC.CCCGAC.GGGGGGGCAGGGCTGGTTTCGGGCGGCACGGCGCCCGGGGCGGGGCCGGGCCCGCTTTCGCCGGCAGc > 2:3909527/1‑101 (MQ=255)
aaGGCGCTGCGGCATCCTG.CCCCCCC.CCCGAC.GGGAGGGCAGGGCTGGTTTCGGGCGGCAAGGCGCCCGCGGCGCGGCCGGGCCTGCTTACGCCTGCAGCg > 1:2231840/1‑101 (MQ=255)
aGGCGCTGCGGCATCCTG.CCCCCCC.CCCGAC.GGGAGGGCAGGGCTGGTTTCGGGCGGCAAGGCGCCCGCGGCGCGGCCGTGCCTGCTTACGCCTGCAGCgg < 2:631139/101‑1 (MQ=255)
gcgcGGCGGCATCCTG.CCCCCCC.CCCGAC.GGGAGGGCAGGGCTGGTTTCGGGCGGCAAGGCGCCCGCGGCGCGGCCGTGCCTGCTTACGCCTGCAGCGGcc < 1:1818404/101‑1 (MQ=255)
cgcTGCGGCATCCTG.CCCCCCC.CCCGAC.GGGAGGGCCGGGCTGGTTTCGGGCGGCAAGGCGCCCGCGGCGCGGCCGGGCCTGCTTACGCCTGCCGCGGCCg > 1:1330278/1‑101 (MQ=255)
gcTGCGGCATCCTG.CCCCCCC.CCCGAC.GGGAGGGGCGGGCTGGTTTCGGGGGGGAAGGCGCCCGGGGGGCGGCCCGGCCCGCTTACGCCTGCAGCGGGCgg > 2:1082275/1‑101 (MQ=255)
gcTGCGGCATCCTG.CCCCCCC.CCCGAC.GGGAGGGCAGGGCTGGTTTCGGGCGGCAAGGCGCCCGCGGCGCGGCCGTGCCTGCTTACGCCTGCAGCGGCCgg > 1:4077922/1‑101 (MQ=255)
cTGCGGCATCCTG.CCCCCCC.CCCGAC.GGGAGGGCAGGGCTGGTTTCGGGCGGCAAGGCGCCCGCGGCCCAGCCGTGCCTGCTTACCCCTGCAGCgggccgg > 2:3580742/1‑96 (MQ=255)
gctgCACCCGG.CCCCCCC.CCCGAC.GGGAGGGCAGGGCTGGTTTCGGGCGGCAAGGCGCCCGCGGCGCGGCCGTGCCTGCTTACGCCTGCAGCGGCCGGAcc < 2:2142046/98‑1 (MQ=255)
gCGGCATCCTG.CCCCCCC.CCCGAC.GGGAGGGCAGGGCTGGTTTCGGGCGGCAAGGCGCCCGCGGCGCGGCCGTGCCTGCTTACGCCTGCAGCGGCCGGAcc < 1:2590021/101‑1 (MQ=255)
cGGCATCCTG.CCCCCCC.CCCGAC.GGGGGGGCAGGGCTGGTTTCGGGCGGCAAGGCGCCCGCGGCGCGGCCGGGCCTGCTTACGCCTGCCGCGGCCGGACCg > 2:230210/1‑101 (MQ=255)
cGGCATCCTG.CCCCCCC.CCCGAC.GGGAGGGCAGGGCTGGTTTCGGGCGGCAAGGCGCCCGCGGCGCGGCCGTGCCTGCTTACGCCTGCAGCGGCCGGACCg < 2:4215020/101‑1 (MQ=255)
ggCATCCTG.CCCCCCC.CCCGAC.GGGAGGGCAGGGCTGGTTTCGGGCGGCAAGGCGCCCGCGGCGCGGCCGTGCCTGCTTACGCCTGCAGCGGCCGGACCga > 1:3667713/1‑101 (MQ=255)
gCATCCTC.CCCCCCC.CCCGAC.GGGAGGGCAGGGCTGGTTTCGGGCGGCAAGGCGCCCGCGGCGCGGCCGTGCCTGCTTACGCCTGCAGCGGCCGGACCgag < 1:3010687/101‑1 (MQ=255)
ctCCTC.CCCCCCC.CCCGAC.GGGAGGGCAGGGCTGGTTTCGGGCGGCAAGGCGCCCGCGGCGCGGCCGTGCCTGCTTACGCCTGCAGCGGCCGGACCGAGAt < 1:3778617/100‑1 (MQ=255)
aTCCTG.CCCCCCC.CCCGAC.GGGAGGGCAGGGCTGGTTTCGGGCGGCAAGGCGCCCGCGGCGCGGCCGGGCCTGCTTACGCCTGCCGCGGCCGGACCGAGAt > 2:207351/1‑101 (MQ=255)
ccTG.CCCCCCC.CCCGAC.GGGGGGGCAGGGCTGGTTTCGGGGGGCAAGGCGCCCCCGGCGCGGCCGTGCCCGCTTACGCCTGCCCCGGCCGGagcaaggatt > 2:314439/1‑92 (MQ=255)
ccTG.CCCCCCC.CCCGAC.GGGAGGGCAGGGCTGGTTTCGGGCGGCAAGGCGCCCGCGGCGCGGCCGTGCCTGCTTACGCCTGCAGCGGCCGGACCGAGAttt < 2:2745155/101‑1 (MQ=255)
ccTG.CCCCCCC.CCCGAC.GGGAGGGCAGGGCTGGTTTCGGGCGGCAAGGCGCCCGCGGCGCGGCCGGGCCTGCTTACGCCCGCAGCGGCCGGGCCGGGAgtt > 1:890256/1‑101 (MQ=255)
tG.CCCCCCC.CCCGAC.GGGAGGGCAGGGCTGGTTTCGGGCGGCAAGGCGCCCGCGGCGCGGCCGTGCCTGCTTACGCCTGCAGCGGCCGGACCGAGATTTCg > 1:2900459/1‑101 (MQ=255)
|
TCATTCCTGCCTCCAGTTTCTGTATGTGAACCGGGGCTTACGCCTGTGGCTGCGGTGGGGCAATGACCCGCACGGGCTTGTGAAGGCGCTGCGGCATCCTG.CCCCCCC.CCCGAC.GGGAGGGCAGGGCTGGTTTCGGGCGGCAAGGCGCCCGCGGCGCGGCCGTGCCTGCTTACGCCTGCAGCGGCCGGACCGAGATTTCG > NC_014034/568701‑568900
Base quality scores:
ATCG
< 3 ≤
ATCG
< 12 ≤
ATCG
< 21 ≤
ATCG
< 33 ≤
ATCG
< 41 ≤
ATCG
|