| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 963,936 | +CCCC | 100% | intergenic (+23/‑78) | RCAP_rcc00874 → / → atzB | inositol monophosphatase/hydroxydechloroatrazine ethylaminohydrolase |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 963,936 | 1 | .→C | 100.0% | 69.7 | 19 | intergenic (+23/‑78) | RCAP_rcc00874/atzB | inositol monophosphatase/hydroxydechloroatrazine ethylaminohydrolase |
| Reads supporting (aligned to +/- strand): new base (0/19): ref base (0/0): total (0/19) | ||||||||||
| * | NC_014034 | 963,936 | 2 | .→C | 100.0% | 69.2 | 19 | intergenic (+23/‑78) | RCAP_rcc00874/atzB | inositol monophosphatase/hydroxydechloroatrazine ethylaminohydrolase |
| Reads supporting (aligned to +/- strand): new base (0/19): ref base (0/0): total (0/19) | ||||||||||
| * | NC_014034 | 963,936 | 3 | .→C | 100.0% | 69.4 | 19 | intergenic (+23/‑78) | RCAP_rcc00874/atzB | inositol monophosphatase/hydroxydechloroatrazine ethylaminohydrolase |
| Reads supporting (aligned to +/- strand): new base (0/19): ref base (0/0): total (0/19) | ||||||||||
| * | NC_014034 | 963,936 | 4 | .→C | 100.0% | 67.7 | 19 | intergenic (+23/‑78) | RCAP_rcc00874/atzB | inositol monophosphatase/hydroxydechloroatrazine ethylaminohydrolase |
| Reads supporting (aligned to +/- strand): new base (0/19): ref base (0/0): total (0/19) | ||||||||||
GCATATCGTGGCGGGCGGGTGCTGGCGGCGGCCAATGCCGAGGTGCATGCGGCGGCGATGGCGGTCCTGAACGGCTGAGGGGGAAGGTCGGGGGGCTGCCG....CCGAACCCCCCGCCCGAAGGGGCCCTCGGGCCCCTTCGGACTTCCCCGAGGGGATTGCGTTGCGCGGGAGGCATCTGATGCG > NC_014034/963836‑964018
||||
gCATATCGTGGCGGGCGGGTGCTGGCGGCGGCCAATGCCGAGGTGCATGCGGCGGCGATGGCGGTCCTGAACGGCTGAGGGGGAAGGTCGGGGGGCTgccg < 2:289111/101‑1 (MQ=255)
gCATATCGTGGCGGGCGGGTGCTGGCGGCGGCCAATGCCGAGGTGCATGCGGCGGCGATGGCGGTCCTGAACGGCTGAGGGGGAAGGTCGGGGGGCTgccg < 1:3399948/101‑1 (MQ=255)
gCATATCGTGGCGGGCGGGTGCTGGCGGCGGCCAATGCCGAGGTGCATGCGGCGGCGATGGCGGTCCTGAACGGCTGAGGGGGAAGGTCGGGGGGCTgccg < 1:749857/101‑1 (MQ=255)
tCGTGGCGGGCGGGTGCTGGCGGCGGCCAATGCCGAGGTGCATGCGGCGGCGATGGCGGTCCTGAACGGCTGAGGGGGAAGGTCGGGGGGCTgccg....ccccc < 2:2871020/101‑4 (MQ=255)
ggggcgggcgGGTGCTGGCGGCGGCCAATGCCGAGGTGCATGCGGCGGCGATGGCGGTCCTGAACGGCTGAGGGGGAAGGTCGGGGGGCTgccg....ccccccg < 1:1455900/99‑6 (MQ=255)
tGGCGGGCGGGTGCTGGCGGCGGCCAATGCCGAGGTGCATGCGGCGGCGATGGCGGTCCTGAACGGCTGAGGGGGAAGGTCGGGGGGCTgccg....ccccccga < 1:3940935/101‑7 (MQ=255)
gcgggcggGTGCTGGCGGCGGCCAATGCCGAGGTGCATGCGGCGGCGATGGCGGTCCTGAACGGCTGAGGGGGAAGGTCGGGGGGCTgccg....ccccccgaac < 1:1195092/101‑9 (MQ=255)
gcgggcggGTGCTGGCGGCGGCCAATGCCGAGGTGCATGCGGCGGCGATGGCGGTCCTGAACGGCTGAGGGGGAAGGTCGGGGGGCTgccg....ccccccgaac < 2:2537019/101‑9 (MQ=255)
gcgggcggGTGCTGGCGGCGGCCAATGCCGAGGTGCATGCGGCGGCGATGGCGGTCCTGAACGGCTGAGGGGGAAGGTCGGGGGGCTgccg....ccccccgaac < 2:1613066/101‑9 (MQ=255)
cgggcgggGGCTGGCGGCGGCCAATGCCGAGGTGCATGCGGCGGCGATGGCGGTCCTGAACGGCTGAGGGGGAAGGTCGGGGGGCTgccg....ccccccgaacc < 1:1691636/101‑10 (MQ=255)
gggcgggTGCTGGCGGCGGCCAATGCCGAGGTGCATGCGGCGGCGATGGCGGTCCTGAACGGCTGAGGGGGAAGGTCGGGGGGCTgccg....ccccccgaaccc < 2:2353796/101‑11 (MQ=255)
cggcggcCAGTGCCGAGGTGCATGCGGCGGCGATGGCGGTCCTGAGCGGCTGAGGGGGAAGGTCGGGGGGCTGCCGCCCCCCGAACCCCCCGCCCGAAggg < 1:746844/101‑1 (MQ=255)
cggcggcCAATGCCGAGGTGCATGCGGCGGCGATGGCGGTCCTGAACGGCTGAGGGGGAAGGTCGGGGGGCTGCCGCCCCCCGAACCCCCCGCCCGAAggg < 2:4213807/101‑1 (MQ=255)
cAATGCCGAGGTGCATGCGGCGGCGATGGCGGTCCTGAACGGCTGAGGGGGAAGGTCGGGGGGCTGCCGCCCCCCGAACCCCCCGCCCGAAGGGGCCCTCg < 2:3094692/101‑1 (MQ=255)
aaTGCCGAGGTGCATGCGGCGGCGATGGCGGTCCTGACCGGATGAGGGGGAAGGTCGGGGGGCTGCCGCCCCCCGAACCCCCCGCCCGAAGGGGCCCTCgg < 2:4406014/101‑1 (MQ=255)
ccGAGGTGCATGCGGCGGCGATGGCGGTCCTGAACGGCTGAGGGGGAAGGTCGGGGGGCTGCCGCCCCCCGAACCCCCCGCCCGAAGGGGCCCTCGGGccc < 1:4094405/101‑1 (MQ=255)
ccGAGGTGCATGCGGCGGCGATGGCGGTCCTGAACGGCTGAGGGGGAAGGTCGGGGGGCTGCCGCCCCCCGAACCCCCCGCCCGAAGGGGCCCTCGGGccc < 2:4356159/101‑1 (MQ=255)
gAGGTGCCTGGGGCGGCGATGGCGGTCCTGAAGGGCTGAGGGGGAAGGTCGGGGGGCTGCCGCCCCCCGAACCCCCCGCCCGAAGGGGCCCTCGGGCCCCt < 2:1405933/101‑1 (MQ=255)
aGGTGCATGCGACGGCGATGGCGGTCCTGAACGGCTGAGGGGGAAGGTCGGGGGGCTGCCGCCCCCCGAACCCCCCGCCCGAAGGGGCCCTCGGGCCCCtt < 2:303259/101‑1 (MQ=255)
gCATGCGGCGGCGATGGCGGTCCTGAACGGCTGAGGGGGAAGGTCGGGGGGCTGCCGCCCCCCGAACCCCCCGCCCGAAGGGGCCCTCGGGCCCCTTCGGa < 2:1284704/101‑1 (MQ=255)
ggcggcgATGGCGGTCCTGAACGGCTGAGGGGGAAGGTCGGGGGGCTGCCGCCCCCCGAACCCCCCGCCCGAAGGGGCCCTCGGGCCCCTTCGGACTTccc < 1:3620591/101‑1 (MQ=255)
cggcgATGGCGGTCCTGAACGGCTGAGGGGGAAGGTCGGGGGGCTGCCGCCCCCCGAACCCCCCGCCCGAAGGGGCCCTCGGGCCCCTTCGGACTTCCCCg < 1:3327337/101‑1 (MQ=255)
gcgATGGCGGTCCTGATCGGCTGAGGGGGAAGGTCGGGGGGCTGCCGCCCCCCGAACCCCCCGCCCGAAGGGGCCCTCGGGCCCCTTCGGACTTCCCCGAg < 2:4112300/101‑1 (MQ=255)
tGGCGGTCCTGAACAGCTGAGGGGGAAGGTCGGGGGGCTGCCGCCCCCCGAACCCCCCGCCCGAAGGGGCCCTCGGGCCCCTTCGGACTTCCCCGAGGGGa < 2:2976324/101‑1 (MQ=255)
gTCCTGAACGGCGGAGGGGGAAGGGCGGGGGGCTGCCGCCCCCCGAACCCCCCGCCCGAAGGGGCCCTCGGGCCCCTTCGGACTTCCCCGAGGGGAttgcg < 1:1669171/101‑1 (MQ=255)
gAACGGATGAGGGGGAGGGGCGGGGGGCTGCCGCCCCCCGAGCCCCCCGCCCGAAGGGGCCCTCGGGCCCCTTCGGACTTCCCCGAGGGGAttgcgttgcg < 1:187564/101‑1 (MQ=255)
ggCTGAGGGGGAAGGTCGGGGGGCTGCCGCCCCCCGAACCCCCCGCCCGAAGGGGCCCTCGGGCCCCTTCGGACTTCCCCGAGGGGATTGCGTTGCGCggg < 1:2211861/101‑1 (MQ=255)
gAGGGGGAAGGGCGGGGGGCTGCCGCCCCCCGAACCCCCCGCCCGAAGGGGCCCTCGGGCCCCTTCGGACTTCCCCGAGGGGATTGCGTTGCGCGGGAGGc < 2:1502432/101‑1 (MQ=255)
ggggAAGGTCGGGGGGCTGCCGCCCCCCGAACCCCCCGCCCGAAGGGGCCCTCGGGCCCCTTCGGACTTCCCCGAGGGGATTGCGTTGCGCGGGAGGCATc < 1:966194/101‑1 (MQ=255)
aGGTCGGGGGGCTGCCGCCCCCCGAACCCCCCGCCCGAAGGGGCCCTCGGGCCCCTTCGGACTTCCCCGAGGGGATTGCGTTGCGCGGGAGGCATCTGATg < 1:23875/101‑1 (MQ=255)
gTCGGGGGGCTGCCGCCCCCCGAACCCCCCGCCCGAAGGGGCCCTCGGGCCCCTTCGGACTTCCCCGAGGGGATTGCGTTGCGCGGGAGGCATCTGATGCg < 2:2495830/101‑1 (MQ=255)
||||
GCATATCGTGGCGGGCGGGTGCTGGCGGCGGCCAATGCCGAGGTGCATGCGGCGGCGATGGCGGTCCTGAACGGCTGAGGGGGAAGGTCGGGGGGCTGCCG....CCGAACCCCCCGCCCGAAGGGGCCCTCGGGCCCCTTCGGACTTCCCCGAGGGGATTGCGTTGCGCGGGAGGCATCTGATGCG > NC_014034/963836‑964018
Base quality scores:
ATCG
< 3 ≤
ATCG
< 15 ≤
ATCG
< 23 ≤
ATCG
< 31 ≤
ATCG
< 39 ≤
ATCG
|