New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	= 1138219	179 (0.850)	2 (0.010)	2/186	34.9	0.01	coding (403/663 nt)	RCAP_rcc01061	hypothetical protein
	?	NC_014034	= 3700416	209 (0.920)					coding (608/1062 nt)	hrcA	heat‑inducible transcription repressor HrcA
Rejected: Position hash score below cutoff.

CCGAACCGACCTTGGCCTTGTGCGACGCGAGATCTCGGGGGGACGCAGTTGGTTGCAAGATCGGGCGGAACGGGCCACGCGCGAGGCCAGGGCGAACGCAGATTTCG....................................................................................................  >  NC_014034/1138113‑1138219 ....................................................................................................GATTTCGCGGCGCAGATCGGAGAGCGTCTTGCCCTCGGCCAGCGCATTGAGAAAATTCGCCGCCTCGCGCATCGAGGAGGGCGTCTGCCCGGCGGGGGGCGTGAAGA  <  NC_014034/3700416‑3700317                                                                                                                                                                                                                                                                   GGTTGCAAGATCGGGCGGAACGGGCCACGCGCGAGGCCAGGGCGAACGCAGATTTCGCGGCGCAGATCGGAGAGCGTCTTGCCCTCGGCCAGCGCATTGAG                                                          >  1:2483582/1‑101 (MQ=255)                                                                                CGCGAGGCCAGGGCGAACGCAGATTTCGCGGCGCAGATCGGAGAGCGTCTTGCCCTCGGCCAGCGCATTGAGAAAATTCGCCGCCTCGCGCATCGAGGAGG                             <  2:2483425/101‑1 (MQ=255)                                                                                                                                                                                                                 CCGAACCGACCTTGGCCTTGTGCGACGCGAGATCTCGGGGGGACGCAGTTGGTTGCAAGATCGGGCGGAACGGGCCACGCGCGAGGCCAGGGCGAACGCAGATTTCG....................................................................................................  >  NC_014034/1138113‑1138219 ....................................................................................................GATTTCGCGGCGCAGATCGGAGAGCGTCTTGCCCTCGGCCAGCGCATTGAGAAAATTCGCCGCCTCGCGCATCGAGGAGGGCGTCTGCCCGGCGGGGGGCGTGAAGA  <  NC_014034/3700416‑3700317 Base quality scores:  ATCG  < 3 ≤  ATCG  < 29 ≤  ATCG  < 33 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG