New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 1147002 =213 (0.970)2 (0.010) 2/194 35.6 0.01 coding (695/1740 nt) RCAP_rcc01075 methyl‑accepting chemotaxis protein
?NC_014034 = 2539346 198 (0.880)coding (328/552 nt) RCAP_rcc02367 calcium‑binding protein
Rejected: Position hash score below cutoff.

GGTCCGACCGCGATGCCGGTCTGCCCTTTGTCGGGGAATTGCAGCTGCGGTCGAAATCCGGGCGCGACATCTTCATTCAGGGCTCGCTCGATCCGGTGATGGA...................................................  <  NC_014034/1147104‑1147002
....................................................................................................GGACGCGGCATGGGGCAAGGTCAGGGCCAAGGTCAAGGTCAGGGGATGGCGGGG  <  NC_014034/2539346‑2539296
                                                                                                                                                          
                                                 atctAAATCCGGGCGCGACATCTTCATTCAGGGCTCGCTCGATCCGGTGATGGACGCGGCATGGGGCAAGGTCAGGGCCAAGGTCAAGGTCAGGGGATGGC      <  2:3542305/97‑1 (MQ=255)
                                                     AAATCCGGGCGCGACATCTTCATTCAGGGCTCGCTCGATCCGGTGATGGACGCGGCATGGGGCAAGGTCAGGGCCAAGGTCAAGGTCAGGGGATGGCagat  >  1:3542553/1‑97 (MQ=255)
                                                                                                                                                          
GGTCCGACCGCGATGCCGGTCTGCCCTTTGTCGGGGAATTGCAGCTGCGGTCGAAATCCGGGCGCGACATCTTCATTCAGGGCTCGCTCGATCCGGTGATGGA...................................................  <  NC_014034/1147104‑1147002
....................................................................................................GGACGCGGCATGGGGCAAGGTCAGGGCCAAGGTCAAGGTCAGGGGATGGCGGGG  <  NC_014034/2539346‑2539296

Base quality scores:  ATCG  < 3 ≤  ATCG  < 29 ≤  ATCG  < 32 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG