New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 1155539204 (0.990)2 (0.010) 2/182 34.5 0.01 coding (646/1197 nt) RCAP_rcc01084 hypothetical protein
?NC_014034 1770780 = 195 (0.860)coding (1112/1152 nt) lpxB lipid‑A‑disaccharide synthase
Rejected: Position hash score below cutoff.

TGCTGCTGGCGGGGCGGCCCCGGCTGGCGCTGCCCTCACGCGAGTGGCTTGTCCGGACCCTGTCTTATGGCGCGAAATCGGCGGCCTGGCTCATGATGGCGGGGCTGC...................................................................................................  >  NC_014034/1155432‑1155539
...................................................................................................CGGGGCTGCGTGCGGCGCAGTCGGTTCTGGCCTTCCTTCAAAGGGGCTGAAGCACGACCCCTTCGGCCTGCAATTTGCTGCGCAGCAATTTCGCCATTTCAAGGGCTT  >  NC_014034/1770780‑1770878
                                                                                                                                                                                                               
                                                    CCGGACCCTGTCTTATGGCGCGAAATCGGCGGCCTGGCTCATGATGGCGGGGCTGCGTGCGGCGCCGTCGGTTCTGGCCTTCCTTCAAAGGGGCTGAAGCA                                                        >  1:1578263/1‑101 (MQ=255)
                                                             GTCTTATGGCGCGAAATCGGCGGCCTGGCTCATGATGGCGGGGCTGCGTGCGGCGCAGTCGGTTCTGGCCTTCCTTCAAAGGGGCTGAAGCACGACCCCTT                                               <  2:1578157/101‑1 (MQ=255)
                                                                                                                                                                                                               
TGCTGCTGGCGGGGCGGCCCCGGCTGGCGCTGCCCTCACGCGAGTGGCTTGTCCGGACCCTGTCTTATGGCGCGAAATCGGCGGCCTGGCTCATGATGGCGGGGCTGC...................................................................................................  >  NC_014034/1155432‑1155539
...................................................................................................CGGGGCTGCGTGCGGCGCAGTCGGTTCTGGCCTTCCTTCAAAGGGGCTGAAGCACGACCCCTTCGGCCTGCAATTTGCTGCGCAGCAATTTCGCCATTTCAAGGGCTT  >  NC_014034/1770780‑1770878

Base quality scores:  ATCG  < 3 ≤  ATCG  < 8 ≤  ATCG  < 20 ≤  ATCG  < 33 ≤  ATCG  < 41 ≤  ATCG