New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 115943 =214 (1.030)2 (0.010) 2/184 34.7 0.01 coding (165/309 nt) RCAP_rcc00109 hypothetical protein
?NC_014034 2942412 = 214 (0.950)coding (32/678 nt) RCAP_rcc02752 lipoprotein
Rejected: Position hash score below cutoff.

GCAACCCGGTGAACCCCTCGCGATGGGCAAAGGTCACCAGATGGCTGTCGACCACGAAGCGCGACTGGATCATCGCCTTGGCATCCTCGGCGGTGATCCGCACCAGC....................................................................................................  <  NC_014034/116049‑115943
...................................................................................................GCACCAGCCCCGTCAGAACGAACCCGACCGCCTTGCGCATCACCGTCTCCTTACCACCATTTCGCCGGTTTCGCGGCAAAGCCCGCGGCTTTTTCCAGCACCAGCGCC  >  NC_014034/2942412‑2942511
                                                                                                                                                                                                               
                                                                     atcTCGCCTTGGCATCCTCGGCGGTGATCCGCACCAGCCCCGTCAGAACGAACCCGACCGCCTTGCGCATCACCGTCTCCTTACCACCATTTCGCCGGTTT                                       <  1:1969166/98‑1 (MQ=255)
                                                                         CGCCTTGGCATCCTCGGCGGTGATCCGCACCAGCCCCGTCAGAACGAACCCGACCGCCTTGCGCATCACCGTCTCCTTACCACCATTTCGCCGGTTTagat                                   >  2:1969037/1‑97 (MQ=255)
                                                                                                                                                                                                               
GCAACCCGGTGAACCCCTCGCGATGGGCAAAGGTCACCAGATGGCTGTCGACCACGAAGCGCGACTGGATCATCGCCTTGGCATCCTCGGCGGTGATCCGCACCAGC....................................................................................................  <  NC_014034/116049‑115943
...................................................................................................GCACCAGCCCCGTCAGAACGAACCCGACCGCCTTGCGCATCACCGTCTCCTTACCACCATTTCGCCGGTTTCGCGGCAAAGCCCGCGGCTTTTTCCAGCACCAGCGCC  >  NC_014034/2942412‑2942511

Base quality scores:  ATCG  < 3 ≤  ATCG  < 29 ≤  ATCG  < 33 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG