New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	1179843 =	213 (0.980)	2 (0.010)	2/192	35.5	0.01	intergenic (‑877/+455)	RCAP_rcc01105/RCAP_rcc01107	hypothetical protein/hypothetical protein
	?	NC_014034	1315812 =	219 (0.970)					coding (2269/2304 nt)	RCAP_rcc01242	hemolysin‑type calcium‑binding repeat family protein
Rejected: Position hash score below cutoff.

TGCCGTGGTCATCTTGGCGTCGCCGAAGAGTGAGCCATGGAGCCGCCACTGGTCCGAGGCCCATGGCGAACGGCCATTCGCCGAAGGCGAGGTTGGTGGTGACG....................................................................................................  <  NC_014034/1179946‑1179843 ....................................................................................................GACGCACACGGCTTTCACGGGAATGGGAAATCGCGGTTGAAATCCGGGGGCGGCGCTGTTTTAGTCAGCCCCACGGGAGCTAACGAACCAGAAAAACCACGGGG  >  NC_014034/1315812‑1315911                                                                                                                                                                                                                                                                                  AACGGCCATTCGCCGAAGGCGAGGTTGGTGGTGACGCACACGGCTTTCACGGGAATGGGAAATCGCGGTTGAAATCCGGGGGCGGCGCTGTTTTAGTCAGC                                     >  2:2456844/1‑101 (MQ=255)                                                                          CCATTCGCCGAAGGCGAGGTTGGTGGTGACGCACACGGCTTTCACGGGAATGGGAAATCGCGGTTGAAATCCGGGGGCGGCGCTGTTTTAGTCAGCCCCAC                                <  1:2457001/101‑1 (MQ=255)                                                                                                                                                                                                              TGCCGTGGTCATCTTGGCGTCGCCGAAGAGTGAGCCATGGAGCCGCCACTGGTCCGAGGCCCATGGCGAACGGCCATTCGCCGAAGGCGAGGTTGGTGGTGACG....................................................................................................  <  NC_014034/1179946‑1179843 ....................................................................................................GACGCACACGGCTTTCACGGGAATGGGAAATCGCGGTTGAAATCCGGGGGCGGCGCTGTTTTAGTCAGCCCCACGGGAGCTAACGAACCAGAAAAACCACGGGG  >  NC_014034/1315812‑1315911 Base quality scores:  ATCG  < 3 ≤  ATCG  < 29 ≤  ATCG  < 32 ≤  ATCG  < 35 ≤  ATCG  < 40 ≤  ATCG