New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	= 1224228	149 (0.930)	16 (0.100)	8/142	23.9	0.11	intergenic (‑100/+69)	hisF/hisA	imidazole glycerol phosphate synthase subunit HisF/1‑(5‑phosphoribosyl)‑5‑[(5‑ phosphoribosylamino)methylideneamino] imidazole‑4‑carboxamide isomerase
	?	NC_014034	2249335 =	114 (0.500)					intergenic (‑131/‑174)	parE/RCAP_rcc02080	DNA topoisomerase IV subunit B/HAD superfamily hydrolase
Rejected: Position hash score below cutoff.

GCGGGGCTCTGCCCCGCACCCCGGGATATTTGTGGCAAGATGAAA................................................................  >  NC_014034/1224184‑1224228 ..........................................................................TTTCATCTTGCCGAAAATATCCCGGGGGGTGAATG  >  NC_014034/2249335‑2249369                                              |||||||||||||||||||||||||||||                                    cCGGGGCTCTGCCCCGGACCCCGGGATATTTGTGGCAAGATGAAAGGGCGCCCCCAGCGGAGCGCCCTTTTCCATTTCACCTTGGCGAAAATATCCCGGGG          >  1:1559072/2‑101 (MQ=255)  CGGGGCTCTGCCCCGGACCCCGGGATATTTGTGGCAAGATGAAAGGGCGCCCCCAGCGGAGCGCCCTTTTCCATTTCACCTTGGCGAAAATATCCCGGGGG         >  2:275912/1‑101 (MQ=255)  CGGGGCTCTGCCCCGGACCCCGGGATATTTGTGGCAAGATGAAAGGGCGCCCCCAGCGGAGCGCCCTTTTCCATTTCACCTTGGCGAAAATATCCCGGGGG         <  2:4410769/101‑1 (MQ=255)     GGCTCTGCCCCGGACCCCGGGATATTTGTGGCAAGATGAAAGGGCGCCCCCAGCGGAGCGCCCTTTTCCATTTCACCTTGGCGAAAATATCCCGGGGGGTG      >  1:1546318/1‑101 (MQ=255)     GGCTCTGCCCCGGACCCCGGGATATTTGTGGCAAGATGAAAGGGCGCCCCCAGCGGAGCGCCCTTTTCCATTTCACCTTGGCGAAAATATCCCGGGGGGTG      <  1:2954926/101‑1 (MQ=255)     GGCTCTGCCCCGGACCCCGGGATATTTGTGGCAAGATGAAAGGGCGCCCCCAGCGGAGCGCCCTTTTCCATTTCACCTTGGCGAAAATATCCCGGGGGGTG      <  1:871658/101‑1 (MQ=255)     GGCTCTGCCCCGGACCCCGGGATATTTGTGGCAAGATGAAAGGGCGCCCCCAGCGGAGCGCCCTTTTCCATTTCACCTTGGCGAAAATATCCCGGGGGGTG      <  2:1499209/101‑1 (MQ=255)     GGCTCTGCCCCGGACCCCGGGATATTTGTGGCAAGATGAAAGGGCGCCCCCAGCGGAGCGCCCTTTTCCATTTCACCTTGGCGAAAATATCCCGGGGGGTG      >  2:2151380/1‑101 (MQ=255)       CTCTGCCCCGGACCCCGGGATATTTGTGGCAAGATGAAAGGGCGCCCCCAGCGGAGCGCCCTTTTCCATTTCACCTTGGCGAAAATATCCCGGGGGGTGAA    <  1:2658286/101‑1 (MQ=255)       CTCTGCCCCGGACCCCGGGATATTTGTGGCAAGATGAAAGGGCGCCCCCAGCGGAGCGCCCTTTTCCATTTCACCTTGGCGAAAATATCCCGGGGGGTGAA    <  1:4365472/101‑1 (MQ=255)       CTCTGCCCCGGACCCCGGGATATTTGTGGCAAGATGAAAGGGCGCCCCCAGCGGAGCGCCCTTTTCCATTTCACCTTGGCGAAAATATCCCGGGGGGTGAA    >  2:925588/1‑101 (MQ=255)        TCTGCCCCGGACCCCGGGATATTTGTGGCAAGATGAAAGGGCGCCCCCAGCGGAGCGCCCTTTTCCATTTCACCTTGGCGAAAATATCCCGGGGGGTGAAT   <  1:2840027/101‑1 (MQ=255)        TCTGCCCCGGACCCCGGGATATTTGTGGCAAGATGAAAGGGCGCCCCCAGCGGAGCGCCCTTTTCCATTTCACCTTGGCGAAAATATCCCGGGGGGTGAAT   <  1:3921689/101‑1 (MQ=255)        TCTGCCCCGGACCCCGGGATATTTGTGGCAAGATGAAAGGGCGCCCCCAGCGGAGCGCCCTTTTCCATTTCACCTTGGCGAAAATATCCCGGGGGGTGAAT   <  2:3965206/101‑1 (MQ=255)         CTGCCCCGGACCCCGGGATATTTGTGGCAAGATGAAAGGGCGCCCCCAGCGGAGCGCCCTTTTCCATTTCACCTTGGCGAAAATATCCCGGGGGGTGAATG  >  1:1764871/1‑101 (MQ=255)         CTGCCCCGGACCCCGGGATATTTGTGGCAAGATGAAAGGGCGCCCCCAGCGGAGCGCCCTTTTCCATTTCACCTTGGCGAAAATATCCCGGGGGGTGAATG  >  2:1988282/1‑101 (MQ=255)                                              |||||||||||||||||||||||||||||                                    GCGGGGCTCTGCCCCGCACCCCGGGATATTTGTGGCAAGATGAAA................................................................  >  NC_014034/1224184‑1224228 ..........................................................................TTTCATCTTGCCGAAAATATCCCGGGGGGTGAATG  >  NC_014034/2249335‑2249369 Base quality scores:  ATCG  < 3 ≤  ATCG  < 24 ≤  ATCG  < 31 ≤  ATCG  < 34 ≤  ATCG  < 40 ≤  ATCG