New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 12558651 (0.010)118 (0.710) 12/146 21.4 0.62 intergenic (+35/+207) RCAP_rcc01184/RCAP_rcc01185 CsbD family protein/methyl‑accepting chemotaxis sensory transducer
?NC_014034 = 3004108 144 (0.640)intergenic (+154/+22) gfo/lrp glucose‑‑fructose oxidoreductase/leucine‑responsive regulatory protein
Rejected: Position hash score below cutoff.

Only 100 of 164 total aligned reads displayed.

AGAAATACGGCCGCACCAAGGAGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGG....................................................................................  >  NC_014034/1255766‑1255865
...............................................................................................................................GGGGGGCTCTGCCCCCCGTCCCCGCGGGACTCCCCCCGGGATATTTGCGCCAAGGTG  <  NC_014034/3004108‑3004052
                                                                                                    |||||||||||||||||||||||||||                                                         
AGAAATACGGCCGCACCAAGGAGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGG                                                                                     <  2:910601/101‑1 (MQ=1)
AGAAATACGGCCGCACCAAGGAGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGG                                                                                     >  1:3746479/1‑101 (MQ=1)
 GAAATACGGCCGCACCAAGGAGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGCAACTCTGGCCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGC                                                                                    <  2:2708978/101‑1 (MQ=0)
 GAAATACGGCCGCACCAAGGAGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGC                                                                                    >  2:4131933/1‑101 (MQ=1)
   AATACGGCCGCACCAAGGAGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCC                                                                                  >  2:852491/1‑101 (MQ=1)
     TACGGCCGCACCAAGGAGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCC                                                                                >  2:4361803/1‑101 (MQ=1)
     TACGGCCGCACCAAGGAGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCC                                                                                <  1:583830/101‑1 (MQ=1)
      ACGGCCGCACCAAGGAGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCG                                                                               >  2:1513384/1‑101 (MQ=1)
        GGCCGCACCAAGGAGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCT                                                                             >  2:1391714/1‑101 (MQ=1)
            GCACCAAGGAGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCG                                                                         <  2:4323653/101‑1 (MQ=1)
             CACCAAGGAGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGG                                                                        >  1:1596612/1‑101 (MQ=1)
               CCAAGGAGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTC                                                                      <  1:1009280/101‑1 (MQ=1)
                CAAGGAGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCC                                                                     <  2:3616586/101‑1 (MQ=1)
                CAAGGAGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCC                                                                     <  1:3522712/101‑1 (MQ=1)
                   GGAGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCC                                                                  <  2:1011033/101‑1 (MQ=1)
                    GAGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCC                                                                 <  1:3617141/101‑1 (MQ=1)
                    GAGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCC                                                                 >  2:3354005/1‑101 (MQ=1)
                     AGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCG                                                                <  2:3746685/101‑1 (MQ=1)
                     AGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCG                                                                >  2:2340649/1‑101 (MQ=1)
                     AGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCG                                                                <  2:3365249/101‑1 (MQ=1)
                        CGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGTGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAG                                                             >  1:3833804/1‑101 (MQ=1)
                        CGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAG                                                             >  2:1111014/1‑101 (MQ=1)
                        CGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAG                                                             >  1:2927851/1‑101 (MQ=1)
                         GGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGc                                                            >  1:911175/1‑100 (MQ=1)
                         GGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGA                                                            <  1:258590/101‑1 (MQ=1)
                         GGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGA                                                            >  1:2293824/1‑101 (MQ=1)
                         GGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGAGCCCCCGCTTTCGGTCCGCCCGAAGA                                                            >  1:2691609/1‑101 (MQ=1)
                          GCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAG                                                           <  1:154425/101‑1 (MQ=1)
                           CGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGG                                                          >  1:2098751/1‑101 (MQ=1)
                           CGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGG                                                          <  2:3692277/101‑1 (MQ=1)
                           CGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGG                                                          <  1:2057921/101‑1 (MQ=1)
                            GAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGG                                                         <  1:911640/101‑1 (MQ=1)
                            GAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGG                                                         <  2:4119752/101‑1 (MQ=1)
                             AAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGG                                                        >  1:1861851/1‑101 (MQ=1)
                              AGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGG                                                       <  1:3741966/101‑1 (MQ=1)
                               GAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGG                                                      <  1:1138366/101‑1 (MQ=1)
                               GAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGG                                                      >  2:2508018/1‑101 (MQ=1)
                               GAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGG                                                      <  1:3493453/101‑1 (MQ=1)
                                AAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGG                                                     <  2:4196118/101‑1 (MQ=1)
                                AAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGG                                                     >  1:2744945/1‑101 (MQ=1)
                                AAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGGCCGCCCGAAGAGGGGGGG                                                     >  2:1507428/1‑101 (MQ=1)
                                 AGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGg                                                    >  2:4427589/1‑100 (MQ=1)
                                 AGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGg                                                    >  2:3951213/1‑100 (MQ=1)
                                 AGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGC                                                    >  2:638444/1‑101 (MQ=1)
                                 AGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGC                                                    >  2:630571/1‑101 (MQ=1)
                                 AGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGC                                                    <  1:1553248/101‑1 (MQ=1)
                                 AGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGC                                                    <  1:4025076/101‑1 (MQ=1)
                                   GAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGggc                                                  >  1:757970/1‑98 (MQ=1)
                                   GAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGCTCCGCCCGAAGAGGGGGGGCgc                                                  >  2:187901/1‑99 (MQ=1)
                                     AGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTG                                                >  1:3882123/1‑101 (MQ=1)
                                        CGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCC                                             <  1:1812151/101‑1 (MQ=1)
                                        CGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCC                                             >  1:394430/1‑101 (MQ=1)
                                         GACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCC                                            <  1:864945/101‑1 (MQ=1)
                                           CGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCC                                          <  2:2997192/101‑1 (MQ=1)
                                            GACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGGGCGGCCCCCCc                                         >  1:1426699/1‑100 (MQ=0)
                                              CTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGTC                                       >  1:702763/1‑101 (MQ=1)
                                               cTCCTGTCGAAACTCTGGCCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGTCC                                      <  2:494724/100‑1 (MQ=1)
                                               TTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGTCC                                      >  2:964146/1‑101 (MQ=1)
                                                 ccgGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAGCCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGTCCCt                                    <  2:3507127/98‑2 (MQ=0)
                                                 CCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGTCCCt                                    <  2:20603/101‑2 (MQ=1)
                                                   TGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGTCCCTGC                                  >  2:2216433/1‑101 (MQ=1)
                                                    GTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGTCCCTGCG                                 >  2:2335076/1‑101 (MQ=1)
                                                    GTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGCCCCTGCG                                 >  2:2107454/1‑101 (MQ=1)
                                                    GTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGACCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGTCCCTGCG                                 >  1:1322413/1‑101 (MQ=1)
                                                     TCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGTCCCTGCGG                                >  2:3542808/1‑101 (MQ=1)
                                                      CGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGTCCCTGCGGG                               >  1:3692077/1‑101 (MQ=1)
                                                      CGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGTCCCTGCGGG                               <  2:2095444/101‑1 (MQ=1)
                                                      CGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGTCCCTGCGGG                               <  2:3833551/101‑1 (MQ=1)
                                                       GAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGTCCCTGCGGGA                              <  2:3924781/101‑1 (MQ=1)
                                                         AACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGTCCCTGCGGGACT                            <  1:1031417/101‑1 (MQ=1)
                                                           CTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGTCCCTGCGGGACTCC                          <  2:3416170/101‑1 (MQ=1)
                                                            TCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGTCCCTGCGGGATTCCC                         <  2:146772/101‑1 (MQ=1)
                                                            TCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGTCCCTGCGGGACTCCC                         >  1:1199064/1‑101 (MQ=1)
                                                            TCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGTCCCTGCGGGACTCCC                         >  1:2248962/1‑101 (MQ=1)
                                                              TGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGTCCCTGCGGGACTCCCCC                       >  2:2482499/1‑101 (MQ=1)
                                                               GACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGTCCCTGCGGGACTCCCCCC                      >  2:1214859/1‑101 (MQ=1)
                                                                ACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGTCCCTGCGGGACTCCCCCCG                     >  2:1741696/1‑101 (MQ=1)
                                                                 CCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGTCCCTGCGGGACTCCCCCCGG                    <  2:277196/101‑1 (MQ=1)
                                                                   TAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCGCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGTCCCTGCGGGACTCCCCCCGGGA                  <  2:911090/101‑1 (MQ=1)
                                                                   TAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGTCCCTGCGGGACTCCCCCCGGGA                  <  1:4032098/101‑1 (MQ=1)
                                                                    AGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGTCCCTGCGGGACTCCCCCCGGGAT                 <  2:374610/101‑1 (MQ=1)
                                                                    AGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGTCCCTGCGGGACTCCCCCCGGGAT                 >  2:486652/1‑101 (MQ=1)
                                                                      GGGTGCCGGACCGGACCCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGTCCCTGCGGGACTCCCCCCGGGATAT               <  1:4227425/101‑1 (MQ=1)
                                                                      GGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGGCCGAAGAGGGGGGGCGCTGCCCCCCGTCCCTGCGGGACTCCCCCCGGGATAT               <  2:2966379/101‑1 (MQ=1)
                                                                      GGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGTCCCTGCGGGACTCCCCCCGGGATAT               <  1:473656/101‑1 (MQ=1)
                                                                        GTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGTCCCTGCGGGACTCCCCCCGGGATATTT             >  2:2587775/1‑101 (MQ=1)
                                                                        GTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGTCCCTGCGGGACTCCCCCCGGGATATTT             <  1:1481920/101‑1 (MQ=1)
                                                                        GTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGTCCCTGCGGGACTCCCCCCGGGATATTT             <  2:3015245/101‑1 (MQ=1)
                                                                        GTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGTCCCTGCGGGACTCCCCCCGGGATATTT             >  1:2077205/1‑101 (MQ=1)
                                                                        GTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGTCCCTGCGGGACTCCCCCCGGGATATTT             <  2:2422724/101‑1 (MQ=1)
                                                                         gGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGTCCCTGCGGGACTCCCCCCGGGATATTTc            <  2:3523985/100‑2 (MQ=11)
                                                                         TGCCGGCCCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGTCCCTGCGGGACTCCCCCCGGGATATTTc            <  2:1934760/101‑2 (MQ=11)
                                                                          GCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGTCCCTGCGGGACTCCCCCCGGGATATTTcc           <  2:1711321/101‑3 (MQ=11)
                                                                             GGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGTCCCTGCGGGACTCCCCCCGGGATATTTCCGCC        <  2:1943684/101‑1 (MQ=11)
                                                                              GACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGTCCCTGCGGGACTCCCCCCGGGATATTTCCGCCA       >  1:2367910/1‑101 (MQ=11)
                                                                              GACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGTCCCTGCGGGACTCCCCCCGGGATATTTCCGCCA       <  2:1426592/101‑1 (MQ=11)
                                                                                 CGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGTCCCTGCGGGACTCCCCCCGGGATATTTCCGCCAAGG    <  2:757890/101‑1 (MQ=9)
                                                                                  GGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGTCCCTGCGGGACTCCCCCCGGGATATTTCCGCCAAGGg   >  1:2768629/1‑100 (MQ=9)
                                                                                   GAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGTCCCTGCGGGACTCCCCCCGGGATATTTCCGCCAAGGgg  <  1:1669426/101‑3 (MQ=9)
                                                                                   GAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGTCCCTGCGGGACTCCCCCCGGGATATTTCCGCCAAGGgg  <  2:1121317/101‑3 (MQ=9)
                                                                                                    |||||||||||||||||||||||||||                                                         
AGAAATACGGCCGCACCAAGGAGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGG....................................................................................  >  NC_014034/1255766‑1255865
...............................................................................................................................GGGGGGCTCTGCCCCCCGTCCCCGCGGGACTCCCCCCGGGATATTTGCGCCAAGGTG  <  NC_014034/3004108‑3004052

Base quality scores:  ATCG  < 3 ≤  ATCG  < 19 ≤  ATCG  < 25 ≤  ATCG  < 33 ≤  ATCG  < 39 ≤  ATCG