New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 125586532 (0.200)72 (0.440) 28/144 12.7 0.43 intergenic (+35/+207) RCAP_rcc01184/RCAP_rcc01185 CsbD family protein/methyl‑accepting chemotaxis sensory transducer
?NC_014034 3238416 = 157 (0.690)intergenic (+23/‑153) trpA/lldD tryptophan synthase subunit alpha/L‑lactate dehydrogenase
Rejected: Position hash score below cutoff.

Only 100 of 121 total aligned reads displayed.

AGAAATACGGCCGCACCAAGGAGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGG...........................................................  >  NC_014034/1255766‑1255865
................................................................................................................................GGGGGCGCTGCCCCCCGT.CCTGCGGACTCC  >  NC_014034/3238416‑3238445
                                                                                                    ||||||||||||||||||||||||||||                               
AGAAATACGGCCGCACCAAGGAGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGG                                                            <  2:910601/101‑1 (MQ=1)
AGAAATACGGCCGCACCAAGGAGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGG                                                            >  1:3746479/1‑101 (MQ=1)
 GAAATACGGCCGCACCAAGGAGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGCAACTCTGGCCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGC                                                           <  2:2708978/101‑1 (MQ=0)
 GAAATACGGCCGCACCAAGGAGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGC                                                           >  2:4131933/1‑101 (MQ=1)
 GAAATACGGCCGCACCAAGGAGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGC                                                           >  1:413155/1‑101 (MQ=1)
 GAAATACGGCCGCACCAAGGAGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGC                                                           >  1:173485/1‑101 (MQ=1)
  AAATACGGCCGCACCAAGGAGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCC                                                          <  2:1882665/101‑1 (MQ=1)
  AAATACGGCCGCACCAAGGAGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCC                                                          >  1:1204513/1‑101 (MQ=1)
   AATACGGCCGCACCAAGGAGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCC                                                         >  2:939213/1‑101 (MQ=1)
    ATACGGCCGCACCAAGGAGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCC                                                        <  1:3778591/101‑1 (MQ=1)
     TACGGCCGCACCAAGGAGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCC                                                       <  2:1020956/101‑1 (MQ=1)
     TACGGCCGCACCAAGGAGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCC                                                       <  1:583830/101‑1 (MQ=1)
     TACGGCCGCACCAAGGAGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCC                                                       >  2:4361803/1‑101 (MQ=1)
     TACGGCCGCACCAAGGAGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCC                                                       <  1:3979336/101‑1 (MQ=1)
      ACGGCCGCACCAAGGAGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCG                                                      >  2:1513384/1‑101 (MQ=1)
        GGCCGCACCAAGGAGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCT                                                    >  2:1391714/1‑101 (MQ=1)
         GCCGCACCAAGGAGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTT                                                   <  1:2720902/101‑1 (MQ=1)
          CCGCACCAAGGAGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGGCTTCGGGTCCCCGCTTT                                                  >  2:2392457/1‑101 (MQ=0)
            GCACCAAGGAGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCG                                                <  2:4323653/101‑1 (MQ=1)
             CACCAAGGAGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGG                                               >  1:1596612/1‑101 (MQ=1)
              ACCAAGGAGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGT                                              >  1:2754136/1‑101 (MQ=1)
              ACCAAGGAGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGT                                              >  2:3484706/1‑101 (MQ=1)
               CCAAGGAGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTC                                             <  1:1009280/101‑1 (MQ=1)
                CAAGGAGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCC                                            <  1:3522712/101‑1 (MQ=1)
                CAAGGAGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCC                                            <  2:3616586/101‑1 (MQ=1)
                  AGGAGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGCGCCGGACCGGCACCGGGGGCCTTCAGGCCCCCGCTTTCGGTCCGC                                          >  2:3013197/1‑101 (MQ=0)
                   GGAGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCC                                         <  2:2797750/101‑1 (MQ=1)
                   GGAGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCC                                         <  2:1011033/101‑1 (MQ=1)
                    GAGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCC                                        <  1:3617141/101‑1 (MQ=1)
                    GAGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCC                                        >  2:3354005/1‑101 (MQ=1)
                    GAGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCC                                        <  1:1976972/101‑1 (MQ=1)
                     AGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCG                                       >  2:2340649/1‑101 (MQ=1)
                     AGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCG                                       <  2:3365249/101‑1 (MQ=1)
                     AGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCG                                       <  2:3746685/101‑1 (MQ=1)
                       GCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAA                                     <  1:2473448/101‑1 (MQ=1)
                        CGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGTGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAG                                    >  1:3833804/1‑101 (MQ=1)
                        CGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAG                                    >  2:1111014/1‑101 (MQ=1)
                        CGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAG                                    >  1:2927851/1‑101 (MQ=1)
                         GGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGc                                   >  1:911175/1‑100 (MQ=1)
                         GGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGA                                   <  1:258590/101‑1 (MQ=1)
                         GGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGA                                   >  1:2293824/1‑101 (MQ=1)
                          GCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAG                                  <  1:154425/101‑1 (MQ=1)
                           CGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGG                                 <  1:2057921/101‑1 (MQ=1)
                           CGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGG                                 >  1:2098751/1‑101 (MQ=1)
                           CGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGG                                 <  2:3692277/101‑1 (MQ=1)
                            GAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGG                                <  2:4119752/101‑1 (MQ=1)
                            GAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGG                                <  1:911640/101‑1 (MQ=1)
                             AAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGG                               >  1:1861851/1‑101 (MQ=1)
                              AGAAGGAAGTCGACGACTTCCTGTCGAACCTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGG                              <  1:1531825/101‑1 (MQ=1)
                              AGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGG                              <  1:3741966/101‑1 (MQ=1)
                               GAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGG                             <  1:3493453/101‑1 (MQ=1)
                               GAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGG                             <  1:1138366/101‑1 (MQ=1)
                               GAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGG                             >  2:2508018/1‑101 (MQ=1)
                                AAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGG                            >  1:3745402/1‑101 (MQ=1)
                                AAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGG                            >  1:2744945/1‑101 (MQ=1)
                                AAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGG                            >  2:3667716/1‑101 (MQ=1)
                                AAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGG                            <  2:4196118/101‑1 (MQ=1)
                                AAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGGCCGCCCGAAGAGGGGGGG                            >  2:1507428/1‑101 (MQ=1)
                                 AGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGg                           >  2:3951213/1‑100 (MQ=1)
                                 AGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGC                           <  2:2499847/101‑1 (MQ=1)
                                 AGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGC                           <  1:1553248/101‑1 (MQ=1)
                                 AGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGC                           >  2:630571/1‑101 (MQ=1)
                                 AGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGC                           >  2:638444/1‑101 (MQ=1)
                                 AGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGC                           <  1:4025076/101‑1 (MQ=1)
                                   GAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGGGC                         >  1:757970/1‑101 (MQ=1)
                                   GAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGCTCCGCCCGAAGAGGGGGGGCGC                         >  2:187901/1‑101 (MQ=1)
                                    catctGACCACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCT                        <  1:881123/96‑1 (MQ=0)
                                    AAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCT                        >  2:2737685/1‑101 (MQ=1)
                                    AAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCT                        <  2:1861727/101‑1 (MQ=1)
                                       TCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCC                     >  2:2150188/1‑101 (MQ=1)
                                        CGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCC                    >  1:394430/1‑101 (MQ=1)
                                        CGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCC                    <  1:1812151/101‑1 (MQ=1)
                                         GACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGTAGAGGGGGGGCGCTagatc                   >  2:881038/1‑96 (MQ=0)
                                         GACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCC                   <  1:864945/101‑1 (MQ=1)
                                           CGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCC                 <  2:2997192/101‑1 (MQ=1)
                                            GACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGGGCGGCCCCCCc                >  1:1426699/1‑100 (MQ=0)
                                            GACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCc                >  1:2351587/1‑100 (MQ=1)
                                             ACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGT               >  1:3934407/1‑101 (MQ=1)
                                             ACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGT               <  2:3748421/101‑1 (MQ=1)
                                              CTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGT.C             >  1:702763/1‑101 (MQ=1)
                                              CTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGT.C             >  1:3496864/1‑101 (MQ=1)
                                               cTCCTGTCGAAACTCTGGCCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGT.CC            <  2:494724/100‑1 (MQ=1)
                                               TTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGT.CC            >  2:964146/1‑101 (MQ=1)
                                                 ccgGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAGCCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGT.CCct          <  2:3507127/98‑3 (MQ=0)
                                                 CCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGCAGAGGGGGGGGGCTGCCCCCCGG.CCct          >  1:826290/1‑99 (MQ=0)
                                                 CCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGT.CCct          <  2:20603/101‑3 (MQ=1)
                                                    GTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGT.CCctgcg       >  2:2335076/1‑96 (MQ=1)
                                                    GTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGT.CCctgcg       <  1:3637810/101‑6 (MQ=1)
                                                    GTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGC.CCctgcg       >  2:2107454/1‑96 (MQ=1)
                                                    GTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGACCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGT.CCctgcg       >  1:1322413/1‑96 (MQ=1)
                                                     TCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGTCCCTGCGG       >  2:3542808/1‑101 (MQ=1)
                                                     TCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGTCCCTGCGG       >  2:776783/1‑101 (MQ=1)
                                                      CGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGTCCCTGCGGg      <  2:2095444/101‑2 (MQ=1)
                                                      CGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGTCCCTGCGGg      >  2:485096/1‑100 (MQ=1)
                                                      CGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGTCCCTGCGGg      <  2:3833551/101‑2 (MQ=1)
                                                       GAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGTCCCTGCGGga     <  1:638512/101‑3 (MQ=1)
                                                       GAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGTCCCTGCGGga     <  2:3396663/101‑3 (MQ=1)
                                                       GAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGTCCCTGCGGga     <  2:3924781/101‑3 (MQ=1)
                                                         AACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGTCCCTGCGGgact   <  1:1031417/101‑5 (MQ=1)
                                                          ACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGTCCCTGCGGgactc  >  2:1196674/1‑96 (MQ=1)
                                                                                                    ||||||||||||||||||||||||||||                               
AGAAATACGGCCGCACCAAGGAGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGG...........................................................  >  NC_014034/1255766‑1255865
................................................................................................................................GGGGGCGCTGCCCCCCGT.CCTGCGGACTCC  >  NC_014034/3238416‑3238445

Base quality scores:  ATCG  < 3 ≤  ATCG  < 20 ≤  ATCG  < 27 ≤  ATCG  < 33 ≤  ATCG  < 40 ≤  ATCG