New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 1273500 =204 (0.970)2 (0.010) 2/186 34.9 0.01 coding (3279/3435 nt) pyc pyruvate carboxylase
?NC_014034 = 1883934 178 (0.790)coding (740/1140 nt) RCAP_rcc01744 class I aminotransferase
Rejected: Position hash score below cutoff.

GGCAGGTCAAGGCCGCGACCAAGGCCAAGCCCAAGGCCGATCCGGCCAATCCGGGCCATGTCGGCGCGCCGATGCCGGGCTCGATCGCCGCGGTGGCGGTGACGGTG....................................................................................................  <  NC_014034/1273606‑1273500
....................................................................................................GACGGTGCGGATATGGGTTTCGGGAACCACCATCCAGCCCAGCCGCCAGCCGGTCATGGAGAAATATTTCGAGAAAGAGTTGATCACACAGGCTTCGTCGCCGATTT  <  NC_014034/1883934‑1883835
                                                                                                                                                                                                               
                           AGCCCAAGGCCGATCCGGCCAATCCGGGCCATGTCGGCGCGCCGATGCCGGGCTCGATCGCCGCGGTGGCGGTGACGGTGCGGATATGGGTTTCGGGAACC                                                                                 >  1:960524/1‑101 (MQ=255)
                                           GGCCAATCCGGGCCATGTCGGCGCGCCGATGCCGGGCTCGATCGCCGCGGTGGCGGTGACGGTGCGGATATGGGTTTCGGGAACCACCATCCAGCCCAGCC                                                                 <  2:960439/101‑1 (MQ=255)
                                                                                                                                                                                                               
GGCAGGTCAAGGCCGCGACCAAGGCCAAGCCCAAGGCCGATCCGGCCAATCCGGGCCATGTCGGCGCGCCGATGCCGGGCTCGATCGCCGCGGTGGCGGTGACGGTG....................................................................................................  <  NC_014034/1273606‑1273500
....................................................................................................GACGGTGCGGATATGGGTTTCGGGAACCACCATCCAGCCCAGCCGCCAGCCGGTCATGGAGAAATATTTCGAGAAAGAGTTGATCACACAGGCTTCGTCGCCGATTT  <  NC_014034/1883934‑1883835

Base quality scores:  ATCG  < 3 ≤  ATCG  < 27 ≤  ATCG  < 32 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG