New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 1279070 =242 (1.150)2 (0.010) 2/186 34.9 0.01 coding (168/939 nt) glyQ glycyl‑tRNA synthetase subunit alpha
?NC_014034 = 1373208 209 (0.920)coding (2588/2616 nt) RCAP_rcc01289 hypothetical protein
Rejected: Position hash score below cutoff.

GGCTCGGTTTGATCAGCACCTGATATTGATAATAATGCTGCAGCCGGTTCGGGTTCTCGCCATAGCGGCCATCAGTCGGCCGGCGCGAGGGCTGCACATAGGCCGCG....................................................................................................  <  NC_014034/1279176‑1279070
....................................................................................................GGCCGCGTCCTCCGGCTCGGGCAGCATGAGCGCGGCAATCAGCTCATCGCCCGCCAGAGCATAGGCGGTGATGCCGCGCTCCTTTTCAAACCGCACCGCATCGCTCG  <  NC_014034/1373208‑1373109
                                                                                                                                                                                                               
                                             GGTTCGGGTTCTCGCCATAGCGGCCATCAGTCGGCCGGCGCGAGGGCTGCACATAGGCCGCGTCCTCCGGCTCGGGCAGCATGAGCGCGGCAATCAGCTCA                                                               >  1:176745/1‑101 (MQ=255)
                                                                GCGGCCATCAGTCGGCCGGCGCGAGGGCTGCACATAGGCCGCGTCCTCCGGCTCGGGCAGCATGAGCGCGGCAATCAGCTCATCGCCCGCCAGAGCATAGG                                            <  2:176718/101‑1 (MQ=255)
                                                                                                                                                                                                               
GGCTCGGTTTGATCAGCACCTGATATTGATAATAATGCTGCAGCCGGTTCGGGTTCTCGCCATAGCGGCCATCAGTCGGCCGGCGCGAGGGCTGCACATAGGCCGCG....................................................................................................  <  NC_014034/1279176‑1279070
....................................................................................................GGCCGCGTCCTCCGGCTCGGGCAGCATGAGCGCGGCAATCAGCTCATCGCCCGCCAGAGCATAGGCGGTGATGCCGCGCTCCTTTTCAAACCGCACCGCATCGCTCG  <  NC_014034/1373208‑1373109

Base quality scores:  ATCG  < 3 ≤  ATCG  < 31 ≤  ATCG  < 33 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG