New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 134616 =279 (1.340)2 (0.010) 2/184 34.7 0.01 coding (666/822 nt) RCAP_rcc00128 ABC transporter permease
?NC_014034 680125 = 203 (0.900)coding (3482/6438 nt) RCAP_rcc00630 ice nucleation protein repeat family protein
Rejected: Position hash score below cutoff.

TCGCCCATCAGCCCGATCGCCAAAAGCGCCAGGGCCACGTTCAGCGCATATTCCCAATTCGAGAAATGCGGGTTGTAGTTGATGAAGGTGAAGCCGCGCGCCTGATCG....................................................................................................  <  NC_014034/134723‑134616
....................................................................................................CCTGATCGGTGGAGAGGCAGGCCAGCTGCGCCGTCGACAGCGCCCGCGCCTGCGCCGAGGTCAGCCCCCGGATCGCGGTTGGGGCCACCTGCGCCAGATCCTCGGTCT  >  NC_014034/680125‑680224
                                                                                                                                                                                                                
                              AGGGCCACGTTCAGCGCATATTCCCAATTCGAGAAATGCGGGTTGTAGTTGATGAAGGTGAAGCCGCGCGCCTGATCGGTGGAGAGGCAGGCCAGCTGGGC                                                                               >  1:1200588/1‑101 (MQ=255)
                                                       AATTCGAGAAATGCGGGTTGTAGTTGATGAAGGTGAAGCCGCGCGCCTGATCGGTGGAGAGGCAGGCCAGCTGCGCCGTCGACAGCGCCCGCGCCTGCGCC                                                      <  2:1200497/101‑1 (MQ=255)
                                                                                                                                                                                                                
TCGCCCATCAGCCCGATCGCCAAAAGCGCCAGGGCCACGTTCAGCGCATATTCCCAATTCGAGAAATGCGGGTTGTAGTTGATGAAGGTGAAGCCGCGCGCCTGATCG....................................................................................................  <  NC_014034/134723‑134616
....................................................................................................CCTGATCGGTGGAGAGGCAGGCCAGCTGCGCCGTCGACAGCGCCCGCGCCTGCGCCGAGGTCAGCCCCCGGATCGCGGTTGGGGCCACCTGCGCCAGATCCTCGGTCT  >  NC_014034/680125‑680224

Base quality scores:  ATCG  < 3 ≤  ATCG  < 23 ≤  ATCG  < 31 ≤  ATCG  < 34 ≤  ATCG  < 40 ≤  ATCG