New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 1359195 =170 (0.780)2 (0.010) 2/192 35.5 0.02 coding (679/909 nt) RCAP_rcc01278 hypothetical protein
?NC_014034 = 3055170 NA (NA)coding (1487/1737 nt) actP3 cation/acetate symporter ActP
Rejected: Position hash score below cutoff.

GCGCGCCGATCACGCGGGGCTGGGCCTCGATCCCGCCTCGCTGCTGACAGGATTTGCCAAACGCGCCAAGGGGATCGCGCAGTGGCACGGCTTTGCGCTCGATC....................................................................................................  <  NC_014034/1359298‑1359195
....................................................................................................GATCAGCCCGAGGGAACCGCCGATCACCGCGCCGCGCGTCGTCATGCCCTTCCACAGAAGCGACATGAAGAGCACCGGGAAGTTCGCCGAAGCGGCGATGGCAA  <  NC_014034/3055170‑3055071
                                                                                                                                                                                                            
                                              ACAGGATTTGCCAAACGCGCCAAGGGGATCGCGCAGTGGCACGGCTTTGCGCTCGATCAGCCCGAGGGAACCGCCGATCACCGCGCCGCGCGTCGTCATGC                                                           >  1:1499342/1‑101 (MQ=255)
                                                        CCAAACGCGCCAAGGGGATCGCGCAGTGGCACGGCTTTGCGCTCGATCAGCCCGAGGGAACCGCCGATCACCGCGCCGCGCGTCGTCATGCCCTTCCACAG                                                 <  2:1499237/101‑1 (MQ=255)
                                                                                                                                                                                                            
GCGCGCCGATCACGCGGGGCTGGGCCTCGATCCCGCCTCGCTGCTGACAGGATTTGCCAAACGCGCCAAGGGGATCGCGCAGTGGCACGGCTTTGCGCTCGATC....................................................................................................  <  NC_014034/1359298‑1359195
....................................................................................................GATCAGCCCGAGGGAACCGCCGATCACCGCGCCGCGCGTCGTCATGCCCTTCCACAGAAGCGACATGAAGAGCACCGGGAAGTTCGCCGAAGCGGCGATGGCAA  <  NC_014034/3055170‑3055071

Base quality scores:  ATCG  < 3 ≤  ATCG  < 30 ≤  ATCG  < 33 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG