New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 1375248 =216 (0.960)2 (0.010) 2/200 36.2 0.01 coding (2020/3150 nt) RCAP_rcc01290 UvrD/REP helicase
?NC_014034 2681073 = 215 (0.950)coding (701/1593 nt) RCAP_rcc02497 ABC transporter ATP‑binding protein
Rejected: Position hash score below cutoff.

AGGTGCAGATCTCGATCCCCGGCGCGGACCAGCCGGCGGCATCGGGATGGC.G.....................................................................  <  NC_014034/1375299‑1375248
.....................................................TCGACAATCTCGCCCTGGCACATCACGCAGACCCGGTCGGCGATGCGGCGCACCACCCCCAGATCATGG  >  NC_014034/2681073‑2681141
                                                                                                                          
AGGTGCAGATCTCGATCCCCGGCGCGGACCAGCCGGCGGCATCGGGATGGCGGTCGACAATCTCGCCCTGGCACATCACGCAGACCCGGTCGGCGATGCGG                       >  2:800873/1‑101 (MQ=255)
                     GCGCGGCCCAGCCGGCGGCATCGGGATGGCGGTCGACAATCTCGCCCTGGCACATCACGCAGACCCGGTCGGCGATGCGGCGCACCACCCCCAGATCATGG  <  1:800955/101‑1 (MQ=255)
                                                                                                                          
AGGTGCAGATCTCGATCCCCGGCGCGGACCAGCCGGCGGCATCGGGATGGC.G.....................................................................  <  NC_014034/1375299‑1375248
.....................................................TCGACAATCTCGCCCTGGCACATCACGCAGACCCGGTCGGCGATGCGGCGCACCACCCCCAGATCATGG  >  NC_014034/2681073‑2681141

Base quality scores:  ATCG  < 3 ≤  ATCG  < 24 ≤  ATCG  < 31 ≤  ATCG  < 34 ≤  ATCG  < 41 ≤  ATCG