New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 1384037247 (1.160)3 (0.010) 3/188 33.9 0.01 coding (3075/3093 nt) RCAP_rcc01294 SNF2 family helicase
?NC_014034 = 1973860 192 (0.850)coding (448/687 nt) rpe1 ribulose‑phosphate 3‑epimerase
Rejected: Position hash score below cutoff.

CGCGCAGGACGTCATAGGGCAGGGTCGAGGTCAGATCGTCCCGCAGGCCATGGCCGAGACATTCGCGCGGGAGGGCGTCGCATGTCCGGAGCCGGGTGAGGGCGGG....................................................................................................  >  NC_014034/1383932‑1384037
....................................................................................................GGCGGGCAGAAATACATCGACATGACGGCCAAGGTGCGCAAGCTGCGCGCGATGATCGGCGACCGTCCGGTGCATATCGAGATCGACGGCGGCATGGACCCGGTGA  <  NC_014034/1973860‑1973761
                                                                                                                                                                                                              
         CGTCATAGGGCAGGGTCGAGGTCAGATCGTCCCGCAGGCCATGGCCGAGACATTCGCGCGGGAGGGCGTCGCATGTCCGGAGCCGGGCGAGGGCGGGCggg                                                                                                  >  2:491822/1‑98 (MQ=255)
                          GAGGTCAGATCGTCCCGCAGGCCATGGCCGAGACATTCGCGCGGGAGGGCGTCGCATGTCCGGAGCCGGGTGAGGGCGGGCAGAAATACATCGACATGACG                                                                                 >  1:3315096/1‑101 (MQ=255)
                           AGGTCAGATCGTCCCGCAGGCCATGGCCGAGACATTCGCGCGGGAGGGCGTCGCATGTCCGGAGCCGGGTGAGGGCGGGCAGAAATACATCGACATGACGG                                                                                <  2:3314864/101‑1 (MQ=255)
                                                                                                                                                                                                              
CGCGCAGGACGTCATAGGGCAGGGTCGAGGTCAGATCGTCCCGCAGGCCATGGCCGAGACATTCGCGCGGGAGGGCGTCGCATGTCCGGAGCCGGGTGAGGGCGGG....................................................................................................  >  NC_014034/1383932‑1384037
....................................................................................................GGCGGGCAGAAATACATCGACATGACGGCCAAGGTGCGCAAGCTGCGCGCGATGATCGGCGACCGTCCGGTGCATATCGAGATCGACGGCGGCATGGACCCGGTGA  <  NC_014034/1973860‑1973761

Base quality scores:  ATCG  < 3 ≤  ATCG  < 23 ≤  ATCG  < 29 ≤  ATCG  < 34 ≤  ATCG  < 41 ≤  ATCG