| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_014034 | 1396031 = | 150 (1.010) | 46 (0.310) | 6/132 | 24.4 | 0.24 | intergenic (+843/‑88) | RCAP_rcc01306/RCAP_rcc01307 | Cas2 family CRISPR‑associated protein/hypothetical protein |
| ? | NC_014034 | = 1396064 | 138 (0.610) | intergenic (+876/‑55) | RCAP_rcc01306/RCAP_rcc01307 | Cas2 family CRISPR‑associated protein/hypothetical protein | |||||
| Rejected: Position hash score below cutoff. | |||||||||||
AGATGCGCCTGTTTCGATCCACGCCCCCGCGGGGGGAGCGACG................................................................................. < NC_014034/1396073‑1396031
.............................................................................TGTTTCGATCCACGCCCCCGCGGGGGGAGCGACGCGGCAGGCGTGAG < NC_014034/1396064‑1396018
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gctggacaccGTTTCGATCCACGCCCCCGCGGGGGGAGCGACGATCGAGCCCGGCCGATTGCGGATTTGATCATCGATGTTTCGATCCACGCCCCCGCGGG > 1:1909549/11‑101 (MQ=2)
gctggacaccGTTTCGATCCACGCCCCCGCGGGGGGAGCGACGATCGAGCCCGGCCGATTGCGGATTTGATCATCGATGTTTCGATCCACGCCCCCGCGGG > 1:2759917/11‑101 (MQ=2)
ctggaccccGTTTCGATCCACGCCCCCGCGGGGGGAGCGACGATCGAGCCCGGCCGATTGCGGATTTGATCATCGATGTTTCGATCCACGCCCCCGCGGGG < 2:1393504/92‑1 (MQ=2)
ctggacaccGTTTCGATCCACGCCCCCGCGGGGGGAGCGACGATCGAGCCCGGCCGATTGCGGATTTGATCATCGATGTTTCGATCCACGCCCCCGCGGGG > 1:3681798/10‑101 (MQ=2)
ctggacaccGTTTCGATCCACGCCCCCGCGGGGGGAGCGACGATCGAGCCCGGCCGATTGCGGATTTGATCATCGATGTTTCGATCCACGCCCCCGCGGGG > 2:2083408/10‑101 (MQ=2)
ctggacaccGTTTCGATCCACGCCCCCGCGGGGGGAGCGACGATCGAGCCCGGCCGATTGCGGATTTGATCATCGATGTTTCGATCCACGCCCCCGCGGGG > 1:3561874/10‑101 (MQ=2)
ctggacaccGTTTCGATCCACGCCCCCGCGGGGGGAGCGACGATCGAGCCCGGCCGATTGCGGATTTGATCATCGATGTTTCGATCCACGCCCCCGCGGGG > 2:4188379/10‑101 (MQ=2)
tggacaccGTTTCGATCCACGCCCCCGCGGGGGGAGCGACGATCGAGCCCGGCCGATTGCGGATTTGATCATCGATGTTTCGATCCACGCCCCCGCGGGGG > 1:3026767/9‑101 (MQ=2)
ggacaccGTTTCGATCCACGCCCCCGCGGGGGGAGCGACGATCGAGCCCGGCCGATTGCGGATTTGATCATCGATGTTTCGATCCACGCCCCCGCGGGGGG > 1:4238957/8‑101 (MQ=11)
ggacaccGTTTCGATCCACGCCCCCGCGGGGGGAGCGACGATCGAGCCCGGCCGATTGCGGATTTGATCATCGATGTTTCGATCCACGCCCCCGCGGGGGG > 1:3283707/8‑101 (MQ=11)
gacaccGTTTCGATCCACGCCCCCGCGGGGGGAGCGACGATCGAGCCCGGCCGATTGCGGATTTGATCATCGATGTTTCGATCCACGCCCCCGCGGGGGGA > 2:308167/7‑101 (MQ=11)
gacaccGTTTCGATCCACGCCCCCGCGGGGGGAGCGACGATCGAGCCCGGCCGATTGCGGATTTGATCATCGATGTTTCGATCCACGCCCCCGCGGGGGGA > 2:181173/7‑101 (MQ=11)
gacaccGTTTCGATCCACGCCCCCGCGGGGGGAGCGACGATCGAGCCCGGCCGATTGCGGATTTGATCATCGATGTTTCGATCCACGCCCCCGCGGGGGGA < 2:1742868/95‑1 (MQ=11)
gcaccGTTTCGATCCACGCCCCCGCGGGGGGAGCGACGATCGAGCCCGGCCGATTGCGGATTTGATCATCGATGTTTCGATCCACGCCCCCGCGGGGGGAG < 2:1456392/96‑1 (MQ=11)
acgccGTTTCGATCCACGCCCCCGCGGGGGGAGCGACGATCGAGCCCGGCCGATTGCGGATTTGATCATCGATGTTTCGATCCACGCCCCCGCGGGGGGAG < 2:1969851/96‑1 (MQ=11)
accccGTTTCGATCCACGCCCCCGCGGGGGGAGCGACGATCGAGCCCGGCCGATTGCGGATTTGATCATCGATGTTTCGATCCACGCCCCCGCGGGGGGAG < 1:1884655/96‑1 (MQ=11)
acaccGTTTCGATCCACGCCCCCGCGGGGGGAGCGACGATCGAGCCCGGCCGATTGCGGATTTGATCATCGATGTTTCGATCCACGCCCCCGCGGGGGGAG > 1:1672519/6‑101 (MQ=11)
caccGTTTCGATCCACGCCCCCGCGGGGGGAGCGACGATCGAGCCCGGCCGATTGCGGATTTGATCATCGATGTTTCGATCCACGCCCCCGCGGGGGGAGC > 1:1717244/5‑101 (MQ=11)
caccGTTTCGATCCACGCCCCCGCGGGGGGAGCGACGATCGAGCCCGGCCGATTGCGGATTTGATCATCGATGTTTCGATCCACGCCCCCGCGGGGGGAGC < 1:4400119/97‑1 (MQ=11)
cccGTTTCGATCCACGCCCCCGCGGGGGGAGCGACGATCGAGCCCGGCCGATTGCGGATTTGATCATCGATGTTTCGATCCACGCCCCCGCGGGGGGAGCG < 2:3565193/98‑1 (MQ=11)
accGTTTCGATCCACGCCCCCGCGGGGGGAGCGACGATCGAGCCCGGCCGATTGCGGATTTGATCATCGATGTTTCGATCCACGCCCCCGCGGGGGGAGCG > 2:3231823/4‑101 (MQ=11)
accGTTTCGATCCACGCCCCCGCGGGGGGAGCGACGATCGAGCCCGGCCGATTGCGGATTTGATCATCGATGTTTCGATCCACGCCCCCGCGGGGGGAGCG > 2:2497584/4‑101 (MQ=11)
ccGTTTCGATCCACGCCCCCGCGGGGGGAGCGACGATCGAGCCCGGCCGATTGCGGATTTGATCATCGATGTTTCGATCCACGCCCCCGCGGGGGGAGCGA > 2:2725824/3‑101 (MQ=11)
ccGTTTCGATCCACGCCCCCGCGGGGGGAGCGACGATCGAGCCCGGCCGATTGCGGATTTGATCATCGATGTTTCGATCCACGCCCCCGCGGGGGGAGCGA < 2:3178708/99‑1 (MQ=11)
ccGTTTCGATCCACGCCCCCGCGGGGGGAGCGACGATCGAGCCCGGCCGATTGCGGATTTGATCATCGATGTTTCGATCCACGCCCCCGCGGGGGGAGCGA < 1:273419/99‑1 (MQ=11)
cGTTTCGATCCACGCCCCCGCGGGGGGAGCGACGATCGAGCCCGGCCGATTGCGGATTTGATCATCGATGTTTCGATCCACGCCCCCGCGGGGGGAGCGAC < 1:2208601/100‑1 (MQ=1)
GTTTCGATCCACGCCCCCGCGGGGGGAGCGACGATCGAGCCCGGCCGATTGCGGATTTGATCATCGATGTTTCGATCCACGCCCCCGCGGGGGGAGCGACG > 1:2229905/1‑101 (MQ=1)
GTTTCGATCCACGCCCCCGCGGGGGGAGCGACGATCGAGCCCGGCCGATTGCGGATTTGATCATCGATGTTTCGATCCACGCCCCCGCGGGGGGAGCGACG > 2:4432800/1‑101 (MQ=1)
TTTCGATCCACGCCCCCGCGGGGGGAGCGACGATCGAGCCCGGCCGATTGCGGATTTGATCATCGATGTTTCGATCCACGCCCCCGCGGGGGGAGCGACGC > 2:972898/1‑101 (MQ=1)
TTCGATCCACGCCCCCGCGGGGGGAGCGACGATCGAGCCCGGCCGATTGCGGATTTGATCATCGATGTTTCGATCCACGCCCCCGCGGGGGGAGCGACGCG < 2:4257819/101‑1 (MQ=1)
TCGATCCACGCCCCCGCGGGGGGAGCGACGATCGAGCCCGGCCGATTGCGGATTTGATCATCGATGTTTCGATCCACGCCCCCGCGGGGGGAGCGACGCGG < 1:1698980/101‑1 (MQ=1)
TCGATCCACGCCCCCGCGGGGGGAGCGACGATCGAGCCCGGCCGATTGCGGATTTGATCATCGATGTTTCGATCCACGCCCCCGCGGGGGGAGCGACGCGG > 2:2244920/1‑101 (MQ=1)
CGATCCCCGCCCCCGCGGGGGGAGCGACGATCGAGCCCGGCCGATTGCGGATTTGATCATCGATGTTTCGATCCACGCCCCCGCGGGGGGAGCGACGCGGt < 1:2096492/101‑2 (MQ=1)
CGATCCACGCCCCCGCGGGGGGAGCGACGATCGAGCCCGGCCGATTGCGGATTTGATCATCGATGTTTCGATCCACGCCCCCGCGGGGGGAGCGACGCGGt < 1:965237/101‑2 (MQ=1)
GATCCCCGCCCCCGCGGGGGGAGCGACGATCGAGCCCGGCCGATTGCGGATTTGATCATCGATGTTTCGATCCACGCCCCCGCGGGGGGAGCGACGCGGta < 2:1365416/101‑3 (MQ=1)
GATCCACGCCCCCGCGGGGGGAGCGACGATCGAGCCCGGCCGATTGCGGATTTGATCATCGATGTTTCGATCCACGCCCCCGCGGGGGGAGCGACGCGGta > 2:3740394/1‑99 (MQ=1)
ATCCACGCCCCCGCGGGGGGAGCGACGATCGAGCCCGGCCGATTGCGGATTTGATCATCGATGTTTCGATCCACGCCCCCGCGGGGGGAGCGACGCGGtat < 2:2542467/101‑4 (MQ=1)
TCCCCGCCCCCGCGGGGGGAGCGACGATCGAGCCCGGCCGATTGCGGATTTGATCATCGATGTTTCGATCCACGCCCCCGCGGGGGGAGCGACGCGGtatc < 1:3149864/101‑5 (MQ=0)
TCCACGCCCCCGCGGGGGGAGCGACGATCGAGCCCGGCCGATTGCGGATTTGATCATCGATGTTTCGATCCACGCCCCCGCGGGGGGAGCGACGCGGtatc < 1:1521822/101‑5 (MQ=1)
CGCCCCCGCGGGGGGAGCGACGATCGAGCCCGGCCGATTGCGGATTTGATCATCGATGTTTCGATCCACGCCCCCGCGGGGGGAGCGACGCGGtatcggtg > 1:1823528/1‑93 (MQ=0)
GCCCCCGCGGGGGGAGCGACGATCGAGCCCGGCCGATTGCGGATTTGATCATCGATGTTTCGATCCACGCCCCCGCGGGGGGAGCGACGCGGtatcggtgt < 2:3044399/101‑10 (MQ=0)
GCCCCCGCGGGGGGAGCGACGATCGAGCCCGGCCGATTGCGGATTTGATCATCGATGTTTCGATCCACGCCCCCGCGGGGGGAGCGACGCGGtatcggtgt > 1:3616176/1‑92 (MQ=0)
GCCCCCGCGGGGGGAGCGACGATCGAGCCCGGCCGATTGCGGATTTGATCATCGATGTTTCGATCCACGCCCCCGCGGGGGGAGCGACGCGGtatcggtgt < 1:138784/101‑10 (MQ=0)
CCCCCGCGGGGGGAGCGACGATCGAGCCCGGCCGATTGCGGATTTGATCATCGATGTTTCGATCCACGCCCCCGCGGGGGGAGCGACGCGGtatcggtgtt < 2:2627160/101‑11 (MQ=0)
CCCCCGCGGGGGGAGCGACGATCGAGCCCGGCCGATTGCGGATTTGATCATCGATGTTTCGATCCACGCCCCCGCGGGGGGAGCGACGCGGtatcggtgtt < 2:1891991/101‑11 (MQ=0)
CCCCCGCGGGGGGAGCGACGATCGAGCCCGGCCGATTGCGGATTTGATCATCGATGTTTCGATCCACGCCCCCGCGGGGGGAGCGACGCGGtatcggtgtt > 1:3393016/1‑91 (MQ=0)
||||||||||||||||||||||||||||||||||
AGATGCGCCTGTTTCGATCCACGCCCCCGCGGGGGGAGCGACG................................................................................. < NC_014034/1396073‑1396031
.............................................................................TGTTTCGATCCACGCCCCCGCGGGGGGAGCGACGCGGCAGGCGTGAG < NC_014034/1396064‑1396018
Base quality scores:
ATCG
< 3 ≤
ATCG
< 20 ≤
ATCG
< 27 ≤
ATCG
< 33 ≤
ATCG
< 39 ≤
ATCG
|