New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	= 1396469	155 (1.050)	49 (0.330)	7/130	23.2	0.23	coding (351/1578 nt)	RCAP_rcc01307	hypothetical protein
	?	NC_014034	1396639 =	171 (0.760)					coding (521/1578 nt)	RCAP_rcc01307	hypothetical protein
Rejected: Position hash score below cutoff.

GGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC...............................................................................  >  NC_014034/1396426‑1396469 ...............................................................................GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCGATA  >  NC_014034/1396639‑1396682                                             |||||||||||||||||||||||||||||||||||                                             gtaaggcCGGTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCGGCGCCGCAGCGAGTGCGTCTGGAACAGGATGTCGCTCCCCCCGCGGGGGCGg                        >  1:3404295/8‑100 (MQ=0)  taaggcCGGTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCGGCGCCGCAGCGAGTGCGTCTGGAACAGGATGTCGCTCCCCCCGCGGGGGCGTG                       <  1:3264339/95‑1 (MQ=0)  taaggcCGGTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCGGCGCCGCAGCGAGTGCGTCTGGAACAGGATGTCGCTCCCCCCGCGGGGGCGTG                       >  1:3200880/7‑101 (MQ=0)  taaggcCGGTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCGGCGCCGCAGCGAGTGCGTCTGGAACAGGATGTCGCTCCCCCCGCGGGGGCGTG                       <  1:2597790/95‑1 (MQ=0)   aaggcCGGTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCGGCGCCGCAGCGAGTGCGTCTGGAACAGGATGTCGCTCCCCCCGCGGGGGCGTGG                      >  1:486957/6‑101 (MQ=0)   aaggcCGGTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCGGCGCCGCAGCGAGTGCGTCTGGAACAGGATGTCGCTCCCCCCGCGGGGGCGTGG                      >  1:1571544/6‑101 (MQ=0)    aggcCGGTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCGGCGCCGCAGCGAGTGCGTCTGGAACAGGATGTCGCTCCCCCCGCGGGGGCGTGGA                     >  2:4069680/5‑101 (MQ=0)    aggcCGGTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCGGCGCCGCAGCGAGTGCGTCTGGAACAGGATGTCGCTCCCCCCGCGGGGGCGTGGA                     <  1:2635088/97‑1 (MQ=0)     ggcCGGTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCGGCGCCGCAGCGAGTGCGTCTGGAACAGGATGTCGCTCCCCCCGCGGGGGCGTGGAT                    <  1:1704250/98‑1 (MQ=1)      gcCGGTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCGGCGCCGCAGCGAGTGCGTCTGGAACAGGATGTCGCTCCCCCCGCGGGGGCGTGGATC                   <  1:2849624/99‑1 (MQ=1)       cCGGTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCGGCGCCGCAGCGAGTGCGTCTGGAACAGGAGGTCGCTCCCCCCGCGGGGGCGGGGATCG                  >  1:1340570/2‑101 (MQ=0)        CGGTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCGGCGCCGCAGCGAGTGCGTCTGGAACAGGATGTCGCTCCCCCCGCGGGGGCGTGGATCGA                 >  2:2618932/1‑101 (MQ=1)        CGGTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCGGCGCCGCAGCGAGTGCGTCTGGAACAGGATGTCGCTCCCCCCGCGGGGGCGTGGATCGA                 <  1:916137/101‑1 (MQ=1)        CGGTGGTCGCGCCCCCCGCGGGGGCGTGGATCGAAACACCCGGCGCCGCAGCGAGTGCGTCTGGAACAGGATGTCGCTCCCCCCGCGGGGGCGTGGATCGA                 <  1:2742676/101‑1 (MQ=1)         ggtGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCGGCGCCGCAGCGAGTGCGTCTGGAACAGGATGTCGCTCCCCCCGCGGGGGCGTGGATCGAA                >  1:2108022/4‑101 (MQ=1)         ggtGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCGGCGCCGCAGCGAGTGCGTCTGGAACAGGATGTCGCTCCCCCCGCGGGGGCGTGGATCGAA                >  2:2115785/4‑101 (MQ=1)         ggtGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCGGCGCCGCAGCGAGTGCGTCTGGAACAGGATGTCGCTCCCCCCGCGGGGGCGTGGATCGAA                <  1:3439544/98‑1 (MQ=1)         ggtGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCGGCGCCGCAGCGAGTGCGTCTGGAACAGGATGTCGCTCCCCCCGCGGGGGCGTGGATCGAA                >  1:3928751/4‑101 (MQ=1)         ggtGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCGGCGCCGCAGCGAGTGCGTCTGGAACAGGATGTCGCTCCCCCCGCGGGGGCGGGGATCGAA                >  2:4089049/4‑101 (MQ=1)          gtGGTCGCCCCCCCCGCGGGGGCGCGGATCGAAACACCCGGCGCCGCAGCGAGTGCGTCTGGAACAGGATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAA               <  1:3480137/99‑1 (MQ=0)            GGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCCCGGCGCCGCAGCGAGTGCGTCTGGAACAGGATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACt             <  2:1484473/101‑2 (MQ=1)            GGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCGGCGCCGCAGCGAGTGCGTCTGGAACAGGATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACt             <  2:4064549/101‑2 (MQ=1)            GGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCGGCGCCGCAGCGAGTGCGTCTGGAACAGGATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACt             <  1:1300839/101‑2 (MQ=1)            GGTCGCCCCCCCCGCGGGGGCGTGGATCGAAACACCCGGCGCCGCAGCGAGTCCGTCTGGAACAGGATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACt             <  2:2891007/101‑2 (MQ=0)             GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCGGCGCCGCAGCGAGTGCGTCTGGAACAGGATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACta            <  2:3646860/101‑3 (MQ=1)              TCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCGGCGCCGCCGCGAGTGCGTCTGGAACAGGATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAaaat           >  2:883853/1‑97 (MQ=0)              TCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCGGCGCCGCAGCGAGTGCGTCTGGAACAGGATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTAT           <  2:486905/101‑1 (MQ=1)              TCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCGGCGCCGCAGCGAGTGCGTCTGGAACAGGATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTAT           <  2:2611957/101‑1 (MQ=1)               CGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCGGCGCCGCAGCGAGTGCGTCTGGAACAGGATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTATG          <  2:3549457/101‑1 (MQ=1)               CGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCGGCGCCGCAGCGAGTGCGTCTGGAACAGGATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTATG          <  2:3336388/101‑1 (MQ=1)                GCTCCCCCCGCGGGGGCGTGGATCGAAACAGCCGGCGCCGCAGCGAGTGCGTCTGGAACAGGATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTATGC         <  1:308799/101‑1 (MQ=0)                GCTCCCCCCGCGGGGGCGTGGATCGAAACACCCGGCGCCGCAGCGAGTGCGTCTGGAACAGGATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTATGC         <  1:4034304/101‑1 (MQ=1)                 cgCCCCCCGCGGGGGCGTGGATCGAAACACCCGGCGCCGCAGCGAGTGCGTCTGGAACAGGATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTATGCt        <  2:1316548/99‑2 (MQ=0)                 CTCCCCCCGCGGGGGCGTGGATCGAAACACCCGGCGCCGCAGCGAGTGCGTCTGGAACAGGATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTATGCt        <  1:1370187/101‑2 (MQ=1)                 CTCCCCCCGCGGGGGCGTGGATCGAAACACCCGGCGCCGCAGCGAGTGCGTCTGGAACAGGATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTATGCt        <  1:3095245/101‑2 (MQ=1)                  cCCCCCCGCGGGGGCGTGGATCGAAACCCCCGGCGCCGCAGCGAGTGCGTCTGGAACAGGATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTATGCtg       <  1:3237698/100‑3 (MQ=0)                  TCCCCCCGCGGGGGCGTGGATCGAAACACCCGGCGCCGCAGCGAGTGCGTCTGGAACAGGATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTATGCtg       >  2:353153/1‑99 (MQ=1)                  TCCCCCCGCGGGGGCGTGGATCGAAACACCCGGCGCCGCAGCGAGTGCGTCTGGAACAGGATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTATGCtg       <  2:386437/101‑3 (MQ=1)                  TCCCCCCGCGGGGGCGTGGATCGAAACACCCGGCGCCGCAGCGAGTGCGTCTGGAACAGGATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTATGCtg       >  2:415182/1‑99 (MQ=1)                  TCCCCCCGCGGGGGCGTGGATCGAAACACCCGGCGCCGCAGCGAGTGCGTCTGGAACAGGATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTATGCtg       <  2:1273044/101‑3 (MQ=1)                  TCCCCCCGCGGGGGCGTGGATCGAAACACCCGGCGCCGCAGCGAGTGCGTCTGGAACAGGATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTATGCtg       >  2:617795/1‑99 (MQ=1)                   CCCCCCGCGGGGGCGTGGATCGAAACACCCGGCGCCGCAGCGAGTGCGTCTGGAACAGGATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTATGCtgg      <  1:143049/101‑4 (MQ=0)                   CCCCCCGCGGGGGCGTGGATCGAAACACCCGGCGCCGCAGCGAGTGCGTCTGGAACAGGATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTATGCtgg      <  1:954931/101‑4 (MQ=0)                    CCCCCGCGGGGGCGTGGATCGAAACACCCGGCGCCGCAGCGAGTGCGTCTGGAACAGGATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTATGCtggc     >  2:2200738/1‑97 (MQ=0)                     CCCCGCGGGGGCGTGGATCGAAACACCCGGCGCCGCAGCGAGTGCGTCTGGAACAGGATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTATGCtggct    >  1:307041/1‑96 (MQ=0)                     CCCCGCGGGGGCGTGGATCGAAACACCCGGCGCCGCAGCGAGTGCGTCTGGAACAGGATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTATGCtggct    <  1:2672591/101‑6 (MQ=0)                      CCCGCGGGGGCGTGGATCGAAACACCCGGCGCCGCAGCGAGTGCGTCTGGAACAGGATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTATGCtggctc   >  1:1615468/1‑95 (MQ=0)                      CCCGCGGGGGCGTGGATCGAAACACCCGGCGCCGCAGCGAGTGCGTCTGGAACAGGATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTATGCtggctc   >  2:542077/1‑95 (MQ=0)                       CCGCGGGGGCGTGGATCGAAACACCCGGCGCCGCAGCGAGTGCGTCTGGAACAGGATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTATGCtggctcg  <  1:1700511/101‑8 (MQ=0)                                             |||||||||||||||||||||||||||||||||||                                             GGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC...............................................................................  >  NC_014034/1396426‑1396469 ...............................................................................GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCGATA  >  NC_014034/1396639‑1396682 Base quality scores:  ATCG  < 3 ≤  ATCG  < 17 ≤  ATCG  < 24 ≤  ATCG  < 33 ≤  ATCG  < 39 ≤  ATCG