New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	= 1396679	203 (1.210)	26 (0.160)	5/148	27.4	0.12	coding (561/1578 nt)	RCAP_rcc01307	hypothetical protein
	?	NC_014034	1396771 =	194 (0.860)					coding (653/1578 nt)	RCAP_rcc01307	hypothetical protein
Rejected: Position hash score below cutoff.

ATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCG..................................................................  >  NC_014034/1396632‑1396679 ..........................................................................GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGA  >  NC_014034/1396771‑1396810                                                 ||||||||||||||||||||||||||                                         ctcgcacGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAATGCGGCGCGGGCCTATGGCTGACGGACCCGCCCGTCGCTCCCCCCGCGGGGGCGTGGATC               >  2:549093/8‑101 (MQ=0) ctcgcacGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAATGCGGCGCGGGCCTATGGCTGACGGACCCGCCCGTCGCTCCCCCCGCGGGGGCGTGGATC               >  2:4065638/8‑101 (MQ=0)  tcgcacGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAATGCGGCGCGGGCCTATGGCTGACGGACCCGCCCGTCGCTCCCCCCGCGGGGGCGTGGATCG              >  1:1884232/7‑101 (MQ=0)  tcgcacGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAATGCGGCGCGGGCCTATGGCTGACGGACCCGCCCGTCGCTCCCCCCGCGGGGGCGTGGATCG              >  1:2408261/7‑101 (MQ=0)  ccgcacGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAATGCGGCGCGGGCCTATGGCTGACGGACCCGCCCGTCGCTCCCCCCGCGGGGGCGTGGATCG              <  2:828281/95‑1 (MQ=0)   cgcacGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAATGCGGCGCGGGCCTATGGCTGACGGACCCGCCCGTCGCTCCCCCCGCGGGGGCGGGGATCGA             >  2:3075314/6‑101 (MQ=0)    gcacGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAATGCGGCGCGGGCCTATGGCTGACGGACCCGCCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAA            <  1:3244003/97‑1 (MQ=0)    gcacGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAATGCGGCGCGGGCCTATGGCTGACGGACCCGCCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAA            >  2:3574842/5‑101 (MQ=0)     ccGGTCGCGCCCCCCGCGGGGGCGTGGATCGAAACAATGCGGCGCGGGCCTATGGCGGACGGACCCGCCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAA           <  2:3042668/99‑1 (MQ=0)     cacGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAATGCGGCGCGGGCCTATGGCTGACGGACCCGCCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAA           >  2:1786142/4‑101 (MQ=0)       cGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAATGCGGCGCGGGCCTATGGCTGACGGACCCGCCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAat         >  2:70497/2‑99 (MQ=0)        GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAATGCGGCGCGGGCCTATGGCTGACGGACCCGCCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACtg        <  2:1013000/101‑3 (MQ=1)        GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAATGCGGCGCGGGCCTATGGCTGACGGACCCGCCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACtc        >  2:1347244/1‑99 (MQ=1)        GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAATGCGGCGCGGGCCTATGGCTGACGGACCCGCCCGTCGCTCCCCCCCCGGGGGCGTGGATCGCAACtg        >  2:1610703/1‑99 (MQ=0)         gCGCCCCCCCCGCGGGGGCGTGGATCGAAACAATGCGGCGCGGGCCTATGGCTGACGGACCCGCCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACtgc       <  2:1362712/100‑4 (MQ=0)         gCGCCCCCCCCGCGGGGGCGTGGATCGAAACAATGCGGCGCGGGCCTATGGCTGACGGACCCGCCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACtgc       <  2:1132644/100‑4 (MQ=0)         TCGCCCCCCCCGCGGGGGCGTGGATCGAAACAATGCGGCGCGGGCCTATGGCTGACGGACCCGCCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACtgc       <  1:3603015/101‑4 (MQ=0)          CGCTCCCCCCGCGGTGGCGTGGATCGAAACAATGCGGCGCGGGCCTATGGCTGACGGACCCGCCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACtgcg      <  1:3843414/101‑5 (MQ=0)           GCTCCCCCCGCGGGGGCGTGGATCGAAACAATGCGGCGCGGGCCTATGGCTGACGGACCCGCCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACtgcgt     >  1:4033531/1‑96 (MQ=0)           GCTCCCCCCGCGGGGGCGTGGATCGAAACAATGCGGCGCGGGCCTATGGCTGACGGACCCGCCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACtgcgt     <  1:2585977/101‑6 (MQ=0)           GCTCCCCCCGCGGGGGCGTGGATCGAAACAATGCGGCGCGGGCCTATGGCTGACGGACCCGCCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACtgcgt     >  1:2376134/1‑96 (MQ=0)            CTCCCCCCGCGGGGGCGTGGATCGAAACAATGCGGCGCGGGCCTATGGCTGACGGACCCGCCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGTG    <  1:3486444/101‑1 (MQ=0)             TCCCCCCGCGGGGGCGTGGATCGAAACAATGCGGCGCGGGCCTATGGCTGACGGACCCGCCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGTGc   >  2:2167541/1‑100 (MQ=2)             TCCCCCCGCGGGGGCGTGGATCGAAACAATGCGGCGCGGGCCTATGGCTGACGGACCCGCCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGTGc   >  1:3488125/1‑100 (MQ=2)              CCCCCCGCGGGGGCGTGGATCGAAACAATGCGGCGCGGGCCTATGGCTGACGGACCCGCCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACaccaatgc  <  2:1615327/101‑9 (MQ=2)              CCCCCCGCGGGGGCGTGGATCGAAACAATGCGGCGCGGGCCTATGGCTGACGGACCCGCCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGTGcg  >  1:2471703/1‑99 (MQ=9)                                                 ||||||||||||||||||||||||||                                         ATTTCGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCG..................................................................  >  NC_014034/1396632‑1396679 ..........................................................................GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGA  >  NC_014034/1396771‑1396810 Base quality scores:  ATCG  < 3 ≤  ATCG  < 15 ≤  ATCG  < 23 ≤  ATCG  < 33 ≤  ATCG  < 39 ≤  ATCG