New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 1447878217 (1.070)2 (0.010) 2/180 34.3 0.01 coding (115/309 nt) RCAP_rcc01345 hypothetical protein
?NC_014034 = 3018966 175 (0.770)coding (1019/1281 nt) RCAP_rcc02829 hypothetical protein
Rejected: Position hash score below cutoff.

GCCCTTTCTCATCTTCGGCCTCTCGGCCAGCCTTGCCGCGATGGGCGAACTGGCGGGGCACGAACGGGGCGGCTCGCTGATCTGGCCCGGCCGGTCCGCCCTCCTCGGGC....................................................................................................  >  NC_014034/1447769‑1447878
....................................................................................................CTCCTCGGGCTCGCCCGGGTCGTGGAAATCGCCGGTGATCGCCTCGAGCAGGTCCATCGGCGTCACGATGCCCTCGAAATGGCCGTATTCGTCAAAGACCAGCACCATAT  <  NC_014034/3018966‑3018867
                                                                                                                                                                                                                  
                                          GGGCGAACTGGCGGGGCACGAACGGGGCGGCTCGCTGATCTGGCCCGGCCGGTCCGCCCTCCTCGGGCTCGCCCGGGTCGTGGAAATCGCCGGTGATCGCC                                                                     >  2:2871410/1‑101 (MQ=255)
                                                                              GATCTGGCCCGGCCGGTCCGCCCTCCTCGGGCTCGCCCGGGTCGTGGAAATCGCCGGTGATCGCCTCGAGCAGGTCCATCGGCGTCACGATGCCCTCGAAA                                 <  1:2871618/101‑1 (MQ=255)
                                                                                                                                                                                                                  
GCCCTTTCTCATCTTCGGCCTCTCGGCCAGCCTTGCCGCGATGGGCGAACTGGCGGGGCACGAACGGGGCGGCTCGCTGATCTGGCCCGGCCGGTCCGCCCTCCTCGGGC....................................................................................................  >  NC_014034/1447769‑1447878
....................................................................................................CTCCTCGGGCTCGCCCGGGTCGTGGAAATCGCCGGTGATCGCCTCGAGCAGGTCCATCGGCGTCACGATGCCCTCGAAATGGCCGTATTCGTCAAAGACCAGCACCATAT  <  NC_014034/3018966‑3018867

Base quality scores:  ATCG  < 3 ≤  ATCG  < 20 ≤  ATCG  < 23 ≤  ATCG  < 31 ≤  ATCG  < 41 ≤  ATCG