New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 1453376209 (0.960)2 (0.010) 2/192 35.5 0.01 coding (105/288 nt) RCAP_rcc01351 hypothetical protein
?NC_014034 2589187 = 188 (0.830)coding (915/2772 nt) glnE glutamate‑ammonia‑ligase adenylyltransferase
Rejected: Position hash score below cutoff.

GATGACGCGGAAAGAGGCTGACGTGACAGACGACACAGTGCTGACCCTTGCGATCCCGGCCGATCTGACCATGGCCGACGCCGAAGCGTGCCGCCAGCGCCTT....................................................................................................  >  NC_014034/1453274‑1453376
...................................................................................................CCTTGTGGGCGCGAATCCGCAGCCGCATGTCATGGGCATCCTGAATCGCGGCGAAATCCAGATGCTTGCGCCAGACGAAAGGGGTCAGCGCGCGCAGGAATTTC  >  NC_014034/2589187‑2589286
                                                                                                                                                                                                           
                                                 GCGATCCCGGCCGATCTGACCATGGCCGACGCCGAAGCGTGCCGCCAGCGCCTTGTGGGCGCGAATCCGCAGCCGCATGTCATGGGCATCCTGAATCGCGG                                                       >  2:2313755/1‑101 (MQ=255)
                                                                       TGGCCGACGCCGAAGCGTGCCGCCAGCGCCTTGTGGGCGCGAATCCGCAGCCGCATGTCATGGGCATCCTGAATCGCGGCGAAATCCAGATGCTTGCGCCA                                 <  1:2313905/101‑1 (MQ=255)
                                                                                                                                                                                                           
GATGACGCGGAAAGAGGCTGACGTGACAGACGACACAGTGCTGACCCTTGCGATCCCGGCCGATCTGACCATGGCCGACGCCGAAGCGTGCCGCCAGCGCCTT....................................................................................................  >  NC_014034/1453274‑1453376
...................................................................................................CCTTGTGGGCGCGAATCCGCAGCCGCATGTCATGGGCATCCTGAATCGCGGCGAAATCCAGATGCTTGCGCCAGACGAAAGGGGTCAGCGCGCGCAGGAATTTC  >  NC_014034/2589187‑2589286

Base quality scores:  ATCG  < 3 ≤  ATCG  < 34 ≤  ATCG  < 35 ≤  ATCG  < 36 ≤  ATCG  < 41 ≤  ATCG