New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	1473410 =	131 (0.750)	8 (0.050)	2/154	31.5	0.05	intergenic (+117/+102)	nadE/RCAP_rcc01367	NAD(+) synthase (glutamine‑hydrolyzing)/hypothetical protein
	?	NC_014034	2853102 =	157 (0.690)					intergenic (+100/+128)	RCAP_rcc02661/RCAP_rcc02662	DeoR family transcriptional regulator/class II aldolase/adducin N‑terminal domain‑containing protein/short‑chain dehydrogenase/reductase family oxidoreductase
Rejected: Position hash score below cutoff.

GCGGCGGTTGGGGGTCTAGGCCCCTGCCCTTTTTGACCGAGGCCATCGCCGAGGTCATGCGCGACATTTGCCCCGTGACCGCCGGGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCCC....................................................................................................  <  NC_014034/1473530‑1473410 ....................................................................................................CGGCCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCGGGGCTGGCGCCGGCCTCTGGTGTGCTTGGGGATGCGGTCGTGCTGAACCGTTGCCCTGACGGGCGGGGAAAGGCGA  >  NC_014034/2853102‑2853201                                                                                                                                                                                                                                                                                                                            AGGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCGGGGCTGGCGCCGGCCTCTGGTGTGCTTGGGGATGCGGTCGTGCTGAACC                             <  1:2631060/101‑1 (MQ=32)                                                                                                 CCCTCGGCCAGCCCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCGGGGCTGGCGCCGGCCTCTGGTGTGCTTGGGGATGCGGTCGTGCTGAACCGTT                          <  1:935842/101‑1 (MQ=17)                                                                                                 CCCCCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCCCCGGGGCTGGCGCCGGCCTCTGGTGTGCTTGGGGATGCGGTCGTGCTGAACCGTT                          <  1:3742109/101‑1 (MQ=12)                                                                                                                                                                                                                               GCGGCGGTTGGGGGTCTAGGCCCCTGCCCTTTTTGACCGAGGCCATCGCCGAGGTCATGCGCGACATTTGCCCCGTGACCGCCGGGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCCC....................................................................................................  <  NC_014034/1473530‑1473410 ....................................................................................................CGGCCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCGGGGCTGGCGCCGGCCTCTGGTGTGCTTGGGGATGCGGTCGTGCTGAACCGTTGCCCTGACGGGCGGGGAAAGGCGA  >  NC_014034/2853102‑2853201 Base quality scores:  ATCG  < 3 ≤  ATCG  < 22 ≤  ATCG  < 27 ≤  ATCG  < 33 ≤  ATCG  < 41 ≤  ATCG